RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W RPS11BP0CX48 156 aaKnown RBP2.48□□□□□ -2.01
CKS1YBR135W RPA12P32529 125 aaKnown RBP2.48□□□□□ -2.01
CKS1YBR135W COX23P38824 151 aa2.48□□□□□ -2.01
CKS1YBR135W GCV3P39726 170 aaPredicted RBP2.48□□□□□ -2.01
CKS1YBR135W RSM18P40033 138 aa2.48□□□□□ -2.01
CKS1YBR135W HPA2Q06592 156 aa2.48□□□□□ -2.01
CKS1YBR135W ENV10Q99382 181 aa2.48□□□□□ -2.01
CKS1YBR135W YCR001WP25347 104 aa2.47□□□□□ -2.01
CKS1YBR135W YBR013CP38215 129 aa2.47□□□□□ -2.01
CKS1YBR135W YGR025WP53216 100 aa2.47□□□□□ -2.01
CKS1YBR135W ICY1Q04329 127 aa2.47□□□□□ -2.01
CKS1YBR135W VAM10Q08474 114 aa2.47□□□□□ -2.01
CKS1YBR135W CCW12Q12127 133 aa2.47□□□□□ -2.01
CKS1YBR135W PAI3P01094 68 aa2.46□□□□□ -2.02
CKS1YBR135W YBR027CP38220 110 aa2.46□□□□□ -2.02
CKS1YBR135W YHR173CP38864 112 aa2.45□□□□□ -2.02
CKS1YBR135W PAU5P43575 122 aa2.45□□□□□ -2.02
CKS1YBR135W PAU4P53427 120 aa2.44□□□□□ -2.02
CKS1YBR135W TOM7P53507 60 aa2.44□□□□□ -2.02
CKS1YBR135W PFY1P07274 126 aa2.43□□□□□ -2.02
CKS1YBR135W RPS22AP0C0W1 130 aaKnown RBP2.43□□□□□ -2.02
CKS1YBR135W PAU1P0CE88 120 aa2.43□□□□□ -2.02
CKS1YBR135W PAU14P0CE89 120 aa2.43□□□□□ -2.02
CKS1YBR135W PAU6P0CE90 120 aa2.43□□□□□ -2.02
CKS1YBR135W PAU18P0CE91 120 aa2.43□□□□□ -2.02
CKS1YBR135W PAU8P0CE92 120 aa2.43□□□□□ -2.02
CKS1YBR135W PAU11P0CE93 120 aa2.43□□□□□ -2.02
CKS1YBR135W TOM6P33448 61 aa2.43□□□□□ -2.02
CKS1YBR135W PAU13P38725 120 aa2.43□□□□□ -2.02
CKS1YBR135W ICS3P47034 131 aa2.43□□□□□ -2.02
CKS1YBR135W PAU10Q03050 120 aa2.43□□□□□ -2.02
CKS1YBR135W PAU20Q08322 120 aa2.43□□□□□ -2.02
CKS1YBR135W COX19Q3E731 98 aa2.43□□□□□ -2.02
CKS1YBR135W PAU9Q3E770 120 aa2.43□□□□□ -2.02
CKS1YBR135W YLR342W-AQ3E810 57 aa2.43□□□□□ -2.02
CKS1YBR135W HMRA2P0CY13 119 aa2.42□□□□□ -2.02
CKS1YBR135W YMR141CP40211 102 aa2.42□□□□□ -2.02
CKS1YBR135W SPC1P46965 94 aa2.42□□□□□ -2.02
CKS1YBR135W YOR105WQ08504 108 aa2.42□□□□□ -2.02
CKS1YBR135W YGR240C-AQ3E786 66 aa2.42□□□□□ -2.02
CKS1YBR135W SPI1P40092 148 aa2.41□□□□□ -2.02
CKS1YBR135W HUA1P40325 198 aa2.41□□□□□ -2.02
CKS1YBR135W YDR119W-AQ2V2P9 66 aa2.41□□□□□ -2.02
CKS1YBR135W YGL014C-AP0C5N1 53 aa2.4□□□□□ -2.03
CKS1YBR135W YIL163CP40448 117 aa2.4□□□□□ -2.03
CKS1YBR135W YBR200W-AQ3E755 54 aa2.39□□□□□ -2.03
CKS1YBR135W YLR285C-AQ3E771 56 aa2.39□□□□□ -2.03
CKS1YBR135W ERI1P62651 68 aaKnown RBP2.38□□□□□ -2.03
CKS1YBR135W YMR122CQ03879 124 aa2.38□□□□□ -2.03
CKS1YBR135W LSM6Q06406 86 aaKnown RBP2.38□□□□□ -2.03
CKS1YBR135W YPR010C-AA5Z2X5 72 aa2.37□□□□□ -2.03
CKS1YBR135W NHP2P32495 156 aaPredicted RBP2.37□□□□□ -2.03
CKS1YBR135W YCR095W-AQ3E787 52 aa2.37□□□□□ -2.03
CKS1YBR135W RPS22BQ3E7Y3 130 aaKnown RBP2.37□□□□□ -2.03
CKS1YBR135W RPL33AP05744 107 aaKnown RBP2.36□□□□□ -2.03
CKS1YBR135W MRPL31P14063 131 aaPredicted RBP2.36□□□□□ -2.03
CKS1YBR135W SSS1P35179 80 aa2.36□□□□□ -2.03
CKS1YBR135W AIM4P38305 123 aaPredicted RBP2.36□□□□□ -2.03
CKS1YBR135W ATX1P38636 73 aa2.36□□□□□ -2.03
CKS1YBR135W PAU7P39545 55 aa2.36□□□□□ -2.03
CKS1YBR135W PMP3P87284 55 aa2.36□□□□□ -2.03
CKS1YBR135W YDR381C-AQ3E6R5 114 aa2.36□□□□□ -2.03
CKS1YBR135W VMA9Q3E7B6 73 aa2.36□□□□□ -2.03
CKS1YBR135W YEL008WP40001 126 aa2.34□□□□□ -2.03
CKS1YBR135W SNA2P56508 79 aa2.34□□□□□ -2.03
CKS1YBR135W YMR122W-AQ3E842 84 aa2.34□□□□□ -2.03
CKS1YBR135W LCL2Q08045 131 aa2.33□□□□□ -2.04
CKS1YBR135W YLL066W-BQ8TGJ7 56 aa2.33□□□□□ -2.04
CKS1YBR135W YDR034C-AP0C289 58 aa2.32□□□□□ -2.04
CKS1YBR135W YNR034W-AQ3E841 98 aa2.32□□□□□ -2.04
CKS1YBR135W PAU23Q07987 124 aa2.31□□□□□ -2.04
CKS1YBR135W PAU17Q12370 124 aa2.31□□□□□ -2.04
CKS1YBR135W YPL038W-AQ3E7B4 63 aa2.31□□□□□ -2.04
CKS1YBR135W AQY2P0CD90 149 aa2.3□□□□□ -2.04
CKS1YBR135W IRC21Q04772 201 aa2.3□□□□□ -2.04
CKS1YBR135W COA3Q3E7B2 85 aa2.3□□□□□ -2.04
CKS1YBR135W YFL041W-AQ3E817 63 aa2.3□□□□□ -2.04
CKS1YBR135W MRX7P53869 86 aa2.28□□□□□ -2.04
CKS1YBR135W YOR314WQ12506 109 aa2.28□□□□□ -2.04
CKS1YBR135W YGL041C-BQ3E750 60 aa2.28□□□□□ -2.04
CKS1YBR135W YER188C-AP0C0V2 99 aa2.27□□□□□ -2.05
CKS1YBR135W LCL1Q02786 101 aa2.27□□□□□ -2.05
CKS1YBR135W YOR008C-AQ3E7B9 74 aa2.27□□□□□ -2.05
CKS1YBR135W YAL065CO13511 128 aa2.26□□□□□ -2.05
CKS1YBR135W YNL198CP40166 100 aa2.26□□□□□ -2.05
CKS1YBR135W MGR2Q02889 113 aa2.26□□□□□ -2.05
CKS1YBR135W YDR210WQ03482 75 aa2.26□□□□□ -2.05
CKS1YBR135W YKL065W-AQ2V2P2 73 aa2.26□□□□□ -2.05
CKS1YBR135W RPC10P40422 70 aa2.25□□□□□ -2.05
CKS1YBR135W TOS6P48560 102 aa2.25□□□□□ -2.05
CKS1YBR135W MRPS12P53732 153 aa2.25□□□□□ -2.05
CKS1YBR135W YLR307C-AQ3E825 87 aa2.25□□□□□ -2.05
CKS1YBR135W YIL134C-AQ45U18 67 aa2.25□□□□□ -2.05
CKS1YBR135W AIM19P40502 157 aa2.24□□□□□ -2.05
CKS1YBR135W BSC4P53841 131 aa2.24□□□□□ -2.05
CKS1YBR135W YGR121W-AQ3E816 71 aa2.22□□□□□ -2.05
CKS1YBR135W YDR010CQ12426 110 aa2.21□□□□□ -2.06
CKS1YBR135W YJL009WP47078 108 aa2.2□□□□□ -2.06
CKS1YBR135W YIL102C-AQ2V2P5 75 aa2.2□□□□□ -2.06
CKS1YBR135W Q0032Q9ZZX7 96 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms