RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	ARO1	P08566	1588 aa	Known RBP	2.75	□□□□□ -1.97
ECM1	YAL059W	POL2	P21951	2222 aa	Known RBP	2.75	□□□□□ -1.97
ECM1	YAL059W	BEM2	P39960	2167 aa	Known RBP	2.75	□□□□□ -1.97
ECM1	YAL059W	YBT1	P32386	1661 aa		2.75	□□□□□ -1.97
ECM1	YAL059W	USO1	P25386	1790 aa		2.74	□□□□□ -1.97
ECM1	YAL059W	VTH1	P40438	1549 aa		2.74	□□□□□ -1.97
ECM1	YAL059W	VTH2	P40890	1549 aa		2.74	□□□□□ -1.97
ECM1	YAL059W	SHU1	P38751	150 aa		2.74	□□□□□ -1.97
ECM1	YAL059W	MMS1	Q06211	1407 aa		2.74	□□□□□ -1.97
ECM1	YAL059W	BLM10	P43583	2143 aa		2.74	□□□□□ -1.97
ECM1	YAL059W	YOL013W-A	P0C272	63 aa	Predicted RBP	2.73	□□□□□ -1.97
ECM1	YAL059W	ERI1	P62651	68 aa	Known RBP	2.73	□□□□□ -1.97
ECM1	YAL059W	YMR007W	Q03675	126 aa		2.73	□□□□□ -1.97
ECM1	YAL059W	HUG1	Q6Q5K6	68 aa		2.73	□□□□□ -1.97
ECM1	YAL059W	CDC25	P04821	1589 aa		2.72	□□□□□ -1.97
ECM1	YAL059W	YSY6	P38374	65 aa		2.72	□□□□□ -1.97
ECM1	YAL059W	YNL042W-B	Q3E7Z2	85 aa		2.72	□□□□□ -1.97
ECM1	YAL059W	DNF2	Q12675	1612 aa		2.71	□□□□□ -1.97
ECM1	YAL059W	BCK1	Q01389	1478 aa		2.71	□□□□□ -1.97
ECM1	YAL059W	YDL022C-A	P0C5L6	82 aa		2.71	□□□□□ -1.98
ECM1	YAL059W	MVB12	P42939	101 aa		2.71	□□□□□ -1.98
ECM1	YAL059W	YDR246W-A	Q3E763	66 aa		2.71	□□□□□ -1.98
ECM1	YAL059W	TY3B-G	Q99315	1547 aa		2.7	□□□□□ -1.98
ECM1	YAL059W	PAU7	P39545	55 aa		2.7	□□□□□ -1.98
ECM1	YAL059W	YMR122W-A	Q3E842	84 aa		2.7	□□□□□ -1.98
ECM1	YAL059W	YIL102C	P40488	101 aa		2.68	□□□□□ -1.98
ECM1	YAL059W	IRC20	Q06554	1556 aa		2.68	□□□□□ -1.98
ECM1	YAL059W	YJR128W	P47162	119 aa		2.67	□□□□□ -1.98
ECM1	YAL059W	YBR201C-A	Q2V2Q3	67 aa		2.67	□□□□□ -1.98
ECM1	YAL059W	Q0032	Q9ZZX7	96 aa		2.65	□□□□□ -1.99
ECM1	YAL059W	NUP188	P52593	1655 aa	Known RBP	2.64	□□□□□ -1.99
ECM1	YAL059W	ULS1	Q08562	1619 aa		2.64	□□□□□ -1.99
ECM1	YAL059W	ATP17	Q06405	101 aa		2.63	□□□□□ -1.99
ECM1	YAL059W	YOR032W-A	Q8TGS1	66 aa		2.63	□□□□□ -1.99
ECM1	YAL059W	PEP1	P32319	1579 aa		2.62	□□□□□ -1.99
ECM1	YAL059W	ATP18	P81450	59 aa		2.62	□□□□□ -1.99
ECM1	YAL059W	SGF11	Q03067	99 aa		2.62	□□□□□ -1.99
ECM1	YAL059W	YKL018C-A	Q3E7A7	99 aa		2.62	□□□□□ -1.99
ECM1	YAL059W	YKL023C-A	Q2V2P3	75 aa		2.61	□□□□□ -1.99
ECM1	YAL059W	YDR182W-A	Q3E796	67 aa		2.61	□□□□□ -1.99
ECM1	YAL059W	YOL097W-A	Q3E7Y9	61 aa		2.61	□□□□□ -1.99
ECM1	YAL059W	VMR1	P38735	1592 aa		2.58	□□□□□ -2
ECM1	YAL059W	COX7	P10174	60 aa		2.58	□□□□□ -2
ECM1	YAL059W	SNF2	P22082	1703 aa		2.58	□□□□□ -2
ECM1	YAL059W	YOR093C	Q12275	1648 aa		2.57	□□□□□ -2
ECM1	YAL059W	HHY1	P39982	102 aa		2.57	□□□□□ -2
ECM1	YAL059W	YOR034C-A	Q3E735	80 aa		2.55	□□□□□ -2
ECM1	YAL059W	YNL190W	P53872	204 aa		2.54	□□□□□ -2
ECM1	YAL059W	SDH6	Q3E785	79 aa		2.54	□□□□□ -2
ECM1	YAL059W	HUB1	Q6Q546	73 aa		2.54	□□□□□ -2
ECM1	YAL059W	URA2	P07259	2214 aa	Known RBP	2.53	□□□□□ -2
ECM1	YAL059W	YHR213W-B	Q8TGK1	99 aa		2.53	□□□□□ -2
ECM1	YAL059W	YMR141C	P40211	102 aa		2.52	□□□□□ -2.01
ECM1	YAL059W	RPS30A	P0CX33	63 aa	Known RBP	2.51	□□□□□ -2.01
ECM1	YAL059W	RPS30B	P0CX34	63 aa	Known RBP	2.51	□□□□□ -2.01
ECM1	YAL059W	YBR072C-A	Q3E794	53 aa		2.5	□□□□□ -2.01
ECM1	YAL059W	HUA1	P40325	198 aa		2.49	□□□□□ -2.01
ECM1	YAL059W	RPL38	P49167	78 aa	Known RBP	2.49	□□□□□ -2.01
ECM1	YAL059W	THO2	P53552	1597 aa	Known RBP	2.48	□□□□□ -2.01
ECM1	YAL059W	EDC1	P53080	175 aa	Predicted RBP	2.47	□□□□□ -2.01
ECM1	YAL059W	YPR108W-A	Q3E7B3	70 aa		2.47	□□□□□ -2.01
ECM1	YAL059W	HKR1	P41809	1802 aa		2.47	□□□□□ -2.01
ECM1	YAL059W	YOL166W-A	Q8TGJ1	51 aa		2.46	□□□□□ -2.02
ECM1	YAL059W	RPC10	P40422	70 aa		2.45	□□□□□ -2.02
ECM1	YAL059W	STU1	P38198	1513 aa		2.44	□□□□□ -2.02
ECM1	YAL059W	YBR032W	P38223	100 aa		2.42	□□□□□ -2.02
ECM1	YAL059W	AUA1	P32450	94 aa		2.4	□□□□□ -2.03
ECM1	YAL059W	NUP192	P47054	1683 aa		2.4	□□□□□ -2.03
ECM1	YAL059W	YJR107C-A	P0CT86	78 aa		2.39	□□□□□ -2.03
ECM1	YAL059W	YLR146W-A	Q2V2P1	62 aa		2.39	□□□□□ -2.03
ECM1	YAL059W	KOG1	P38873	1557 aa		2.39	□□□□□ -2.03
ECM1	YAL059W	PDR15	Q04182	1529 aa	Known RBP	2.38	□□□□□ -2.03
ECM1	YAL059W	RKR1	Q04781	1562 aa		2.37	□□□□□ -2.03
ECM1	YAL059W	YBL039W-B	P0C268	59 aa		2.36	□□□□□ -2.03
ECM1	YAL059W	MLP2	P40457	1679 aa		2.36	□□□□□ -2.03
ECM1	YAL059W	YOR192C-C	Q3E736	78 aa		2.35	□□□□□ -2.03
ECM1	YAL059W	YBR200W-A	Q3E755	54 aa		2.35	□□□□□ -2.03
ECM1	YAL059W	YOR011W-A	Q3E807	68 aa		2.35	□□□□□ -2.03
ECM1	YAL059W	RPL43A	P0CX25	92 aa	Known RBP	2.33	□□□□□ -2.04
ECM1	YAL059W	RPL43B	P0CX26	92 aa		2.33	□□□□□ -2.04
ECM1	YAL059W	CHC1	P22137	1653 aa	Known RBP	2.33	□□□□□ -2.04
ECM1	YAL059W	YMR001C-A	Q8TGS9	76 aa		2.32	□□□□□ -2.04
ECM1	YAL059W	NUP170	P38181	1502 aa		2.3	□□□□□ -2.04
ECM1	YAL059W	YLR157W-D	P0CE99	70 aa		2.29	□□□□□ -2.04
ECM1	YAL059W	RPL37A	P49166	88 aa	Known RBP	2.27	□□□□□ -2.05
ECM1	YAL059W	HIR3	P47171	1648 aa		2.27	□□□□□ -2.05
ECM1	YAL059W	YOR394C-A	Q8TGJ0	55 aa		2.26	□□□□□ -2.05
ECM1	YAL059W	YLR307C-A	Q3E825	87 aa		2.24	□□□□□ -2.05
ECM1	YAL059W	YLR157W-E	P0CF00	54 aa		2.23	□□□□□ -2.05
ECM1	YAL059W	BUD3	P25558	1636 aa		2.22	□□□□□ -2.05
ECM1	YAL059W	RPS27A	P35997	82 aa	Known RBP	2.22	□□□□□ -2.05
ECM1	YAL059W	OLI1	P61829	76 aa		2.2	□□□□□ -2.06
ECM1	YAL059W	YGR025W	P53216	100 aa		2.18	□□□□□ -2.06
ECM1	YAL059W	YOL164W-A	Q3E7A5	60 aa		2.18	□□□□□ -2.06
ECM1	YAL059W	SMX2	P40204	77 aa	Known RBP	2.15	□□□□□ -2.07
ECM1	YAL059W	YBR230W-A	Q3E762	66 aa		2.12	□□□□□ -2.07
ECM1	YAL059W	YBR016W	P38216	128 aa		2.11	□□□□□ -2.07
ECM1	YAL059W	RPL37B	P51402	88 aa	Known RBP	2.1	□□□□□ -2.07
ECM1	YAL059W	ATG2	P53855	1592 aa		2.09	□□□□□ -2.08
ECM1	YAL059W	YFR009W-A	P0C5M9	85 aa		2.08	□□□□□ -2.08

Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms