RNA–Protein interactions for RNA: RDN5-6

RDN5-6, Transcript of Variant 5S ribosomal rRNA (5S rRNA) gene, yeastyeast

Gene RDN5-6, Length 121 nt, Biotype rRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN5-6RDN5-6 YFL065CP43539 102 aa2.78□□□□□ -1.96
RDN5-6RDN5-6 DDR2P89113 61 aa2.78□□□□□ -1.96
RDN5-6RDN5-6 LCL2Q08045 131 aa2.78□□□□□ -1.96
RDN5-6RDN5-6 YPR203WQ08994 102 aa2.78□□□□□ -1.96
RDN5-6RDN5-6 SPT4P32914 102 aaPredicted RBP2.77□□□□□ -1.97
RDN5-6RDN5-6 SFT1P43682 97 aa2.77□□□□□ -1.97
RDN5-6RDN5-6 EDC1P53080 175 aaPredicted RBP2.77□□□□□ -1.97
RDN5-6RDN5-6 YHR139C-AO13536 103 aa2.76□□□□□ -1.97
RDN5-6RDN5-6 RAD6P06104 172 aa2.76□□□□□ -1.97
RDN5-6RDN5-6 YER039C-AP0CD97 72 aa2.76□□□□□ -1.97
RDN5-6RDN5-6 KRE1P17260 313 aa2.76□□□□□ -1.97
RDN5-6RDN5-6 SOH1P38633 127 aa2.76□□□□□ -1.97
RDN5-6RDN5-6 GAT4P40569 121 aa2.76□□□□□ -1.97
RDN5-6RDN5-6 BSC4P53841 131 aa2.76□□□□□ -1.97
RDN5-6RDN5-6 YFL041W-AQ3E817 63 aa2.76□□□□□ -1.97
RDN5-6RDN5-6 YAR1P46683 200 aa2.75□□□□□ -1.97
RDN5-6RDN5-6 GIS2P53849 153 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
RDN5-6RDN5-6 YHR007C-AQ07074 71 aa2.75□□□□□ -1.97
RDN5-6RDN5-6 RPL36BO14455 100 aaKnown RBP2.74□□□□□ -1.97
RDN5-6RDN5-6 RPL38P49167 78 aaKnown RBP2.74□□□□□ -1.97
RDN5-6RDN5-6 YOR072WQ08486 104 aa2.74□□□□□ -1.97
RDN5-6RDN5-6 EMC6Q12431 108 aa2.74□□□□□ -1.97
RDN5-6RDN5-6 ICS3P47034 131 aa2.73□□□□□ -1.97
RDN5-6RDN5-6 RSM19P53733 91 aaPredicted RBP2.73□□□□□ -1.97
RDN5-6RDN5-6 YHR213W-BQ8TGK1 99 aa2.73□□□□□ -1.97
RDN5-6RDN5-6 RPP2AP05319 106 aaKnown RBP2.72□□□□□ -1.97
RDN5-6RDN5-6 TDA2P40045 126 aa2.72□□□□□ -1.97
RDN5-6RDN5-6 LCL1Q02786 101 aa2.72□□□□□ -1.97
RDN5-6RDN5-6 SHH4Q06236 168 aa2.72□□□□□ -1.97
RDN5-6RDN5-6 YHL042WP38729 150 aa2.71□□□□□ -1.98
RDN5-6RDN5-6 COX23P38824 151 aa2.71□□□□□ -1.98
RDN5-6RDN5-6 EDC2P40023 145 aaPredicted RBP2.71□□□□□ -1.98
RDN5-6RDN5-6 RSM18P40033 138 aa2.71□□□□□ -1.98
RDN5-6RDN5-6 MMS2P53152 137 aa2.71□□□□□ -1.98
RDN5-6RDN5-6 YOL014WQ08110 124 aa2.71□□□□□ -1.98
RDN5-6RDN5-6 YJL133C-AQ3E7A3 74 aa2.71□□□□□ -1.98
RDN5-6RDN5-6 YMR230W-AQ3E7B5 62 aa2.71□□□□□ -1.98
RDN5-6RDN5-6 YGR121W-AQ3E816 71 aa2.71□□□□□ -1.98
RDN5-6RDN5-6 YSY6P38374 65 aa2.7□□□□□ -1.98
RDN5-6RDN5-6 YLR285C-AQ3E771 56 aa2.7□□□□□ -1.98
RDN5-6RDN5-6 TDA8Q6B2U8 126 aa2.7□□□□□ -1.98
RDN5-6RDN5-6 SPG1P50088 95 aa2.69□□□□□ -1.98
RDN5-6RDN5-6 YGR039WP53225 103 aa2.69□□□□□ -1.98
RDN5-6RDN5-6 ECM19Q06011 112 aa2.69□□□□□ -1.98
RDN5-6RDN5-6 ATP20Q12233 115 aa2.69□□□□□ -1.98
RDN5-6RDN5-6 YLR415CO13578 112 aa2.68□□□□□ -1.98
RDN5-6RDN5-6 YNL184CP53876 108 aa2.68□□□□□ -1.98
RDN5-6RDN5-6 COF1Q03048 143 aaKnown RBP2.68□□□□□ -1.98
RDN5-6RDN5-6 YDR119W-AQ2V2P9 66 aa2.68□□□□□ -1.98
RDN5-6RDN5-6 MDN1Q12019 4910 aaKnown RBP2.68□□□□□ -1.98
RDN5-6RDN5-6 YEL045CP32616 141 aa2.67□□□□□ -1.98
RDN5-6RDN5-6 YBR027CP38220 110 aa2.67□□□□□ -1.98
RDN5-6RDN5-6 YHL018WP38744 120 aaPredicted RBP2.67□□□□□ -1.98
RDN5-6RDN5-6 YJR085CP47131 105 aaKnown RBP2.67□□□□□ -1.98
RDN5-6RDN5-6 YLR162WQ06235 118 aa2.67□□□□□ -1.98
RDN5-6RDN5-6 YBL112CQ3E7Y4 105 aa2.67□□□□□ -1.98
RDN5-6RDN5-6 MIC10Q96VH5 97 aa2.67□□□□□ -1.98
RDN5-6RDN5-6 YJL197C-AP0C5P0 93 aa2.66□□□□□ -1.98
RDN5-6RDN5-6 DDR48P18899 430 aaKnown RBP2.66□□□□□ -1.98
RDN5-6RDN5-6 YGL149WP53116 101 aa2.65□□□□□ -1.99
RDN5-6RDN5-6 YOR268CQ08734 132 aa2.65□□□□□ -1.99
RDN5-6RDN5-6 YCR050CP25630 102 aa2.64□□□□□ -1.99
RDN5-6RDN5-6 YPL038W-AQ3E7B4 63 aa2.64□□□□□ -1.99
RDN5-6RDN5-6 YKL183C-AQ3E765 70 aa2.63□□□□□ -1.99
RDN5-6RDN5-6 YLR157W-DP0CE99 70 aa2.62□□□□□ -1.99
RDN5-6RDN5-6 YCR043CP25361 127 aa2.62□□□□□ -1.99
RDN5-6RDN5-6 YBR182C-AQ8TGU6 64 aa2.62□□□□□ -1.99
RDN5-6RDN5-6 YOR304C-AO14468 76 aa2.61□□□□□ -1.99
RDN5-6RDN5-6 YOR314WQ12506 109 aa2.61□□□□□ -1.99
RDN5-6RDN5-6 YOL097W-AQ3E7Y9 61 aa2.61□□□□□ -1.99
RDN5-6RDN5-6 YPL080CQ02826 108 aa2.6□□□□□ -1.99
RDN5-6RDN5-6 YDR246W-AQ3E763 66 aa2.6□□□□□ -1.99
RDN5-6RDN5-6 NOP10Q6Q547 58 aaPredicted RBP2.6□□□□□ -1.99
RDN5-6RDN5-6 YAR064WP39563 99 aa2.59□□□□□ -1.99
RDN5-6RDN5-6 RPL36AP05745 100 aaPredicted RBP2.58□□□□□ -2
RDN5-6RDN5-6 TOM6P33448 61 aa2.58□□□□□ -2
RDN5-6RDN5-6 HOT13P36078 116 aa2.58□□□□□ -2
RDN5-6RDN5-6 AIM4P38305 123 aaPredicted RBP2.58□□□□□ -2
RDN5-6RDN5-6 YER187WP40102 141 aa2.58□□□□□ -2
RDN5-6RDN5-6 YIL102CP40488 101 aa2.58□□□□□ -2
RDN5-6RDN5-6 YFL067WP43537 175 aa2.58□□□□□ -2
RDN5-6RDN5-6 KTI11Q3E840 82 aa2.57□□□□□ -2
RDN5-6RDN5-6 KSH1Q8TGJ3 72 aa2.57□□□□□ -2
RDN5-6RDN5-6 LIP1Q03579 150 aa2.56□□□□□ -2
RDN5-6RDN5-6 YDR010CQ12426 110 aa2.56□□□□□ -2
RDN5-6RDN5-6 YOL013W-AP0C272 63 aaPredicted RBP2.55□□□□□ -2
RDN5-6RDN5-6 YDL012CQ12489 107 aa2.55□□□□□ -2
RDN5-6RDN5-6 SAP30P38429 201 aa2.54□□□□□ -2
RDN5-6RDN5-6 YHL005CP38752 130 aa2.54□□□□□ -2
RDN5-6RDN5-6 YPR153WQ06537 140 aa2.54□□□□□ -2
RDN5-6RDN5-6 YOL166W-AQ8TGJ1 51 aa2.54□□□□□ -2
RDN5-6RDN5-6 YDR182W-AQ3E796 67 aa2.53□□□□□ -2
RDN5-6RDN5-6 YLR361C-AQ3E795 98 aa2.52□□□□□ -2.01
RDN5-6RDN5-6 YHR073W-AP0C5N7 58 aa2.51□□□□□ -2.01
RDN5-6RDN5-6 HHF1P02309 103 aaKnown RBP2.49□□□□□ -2.01
RDN5-6RDN5-6 YKL069WP36088 180 aa2.49□□□□□ -2.01
RDN5-6RDN5-6 RPS30AP0CX33 63 aaKnown RBP2.48□□□□□ -2.01
RDN5-6RDN5-6 RPS30BP0CX34 63 aaKnown RBP2.48□□□□□ -2.01
RDN5-6RDN5-6 COX7P10174 60 aa2.48□□□□□ -2.01
RDN5-6RDN5-6 YJR128WP47162 119 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms