RNA–Protein interactions for RNA: ENST00000630295.1

BRCC3-210, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-210ENST00000630295 UBXN6Q9BZV1 441 aa9.4□□□□□ -0.9
BRCC3-210ENST00000630295 SFXN1Q9H9B4 322 aa9.4□□□□□ -0.9
BRCC3-210ENST00000630295 ASAH2Q9NR71 780 aa9.4□□□□□ -0.9
BRCC3-210ENST00000630295 MYO1AQ9UBC5 1043 aa9.4□□□□□ -0.9
BRCC3-210ENST00000630295 UXTQ9UBK9 157 aaPredicted RBP9.4□□□□□ -0.9
BRCC3-210ENST00000630295 ASB3Q9Y575 518 aa9.4□□□□□ -0.9
BRCC3-210ENST00000630295 E5RJQ4 531 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 TULP2O00295 520 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 DDX3XO00571 662 aaKnown RBP eCLIP9.39□□□□□ -0.913e-7■■■■□ 19.9
BRCC3-210ENST00000630295 NDUFA10O95299 355 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 ZBED1O96006 694 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 CYP1A1P04798 512 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-210ENST00000630295 HNRNPA1P09651 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
BRCC3-210ENST00000630295 MYBL1P10243 752 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 GZMAP12544 262 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 PTPN2P17706 415 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 NOMO3P69849 1222 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 ADGRE1Q14246 886 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 C10orf76Q5T2E6 689 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 FAM102AQ5T9C2 384 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-210ENST00000630295 DNAJC24Q6P3W2 148 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 DCUN1D2Q6PH85 259 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 TOGARAM2Q6ZUX3 1019 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 RSRC2Q7L4I2 434 aaKnown RBP9.39□□□□□ -0.91
BRCC3-210ENST00000630295 DNAJB7Q7Z6W7 309 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-210ENST00000630295 ARHGAP18Q8N392 663 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 ZNF454Q8N9F8 522 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 STKLD1Q8NE28 680 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 SCAMP5Q8TAC9 235 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 RNF139Q8WU17 664 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 SLC35F5Q8WV83 523 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 KCTD13Q8WZ19 329 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 PDLIM2Q96JY6 352 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 CEP295NLQ96MC4 621 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 PPP1R9BQ96SB3 815 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 SELENOOQ9BVL4 669 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 ULBP1Q9BZM6 244 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 CRISPLD1Q9H336 500 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 SLITRK6Q9H5Y7 841 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 CSNK1G1Q9HCP0 422 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 PNPLA8Q9NP80 782 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 ZDHHC7Q9NXF8 308 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 TRPM5Q9NZQ8 1165 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 CHORDC1Q9UHD1 332 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-210ENST00000630295 NAGPAQ9UK23 515 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 PCDHGA10Q9Y5H3 936 aa9.39□□□□□ -0.91
BRCC3-210ENST00000630295 EIF3CLB5ME19 914 aaKnown RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 LINC01565O15544 149 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 VNN2O95498 520 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 FGF19O95750 216 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 RALAP11233 206 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 UNGP13051 313 aaPredicted RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 HOXB8P17481 243 aaPredicted RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 ATF6P18850 670 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 NOP2P46087 812 aaKnown RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 GPC5P78333 572 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 RBM10P98175 930 aaKnown RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 CENPCQ03188 943 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 TAF10Q12962 218 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 MTMR3Q13615 1198 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 MTF1Q14872 753 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 CLUL1Q15846 466 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 PABPC1LQ4VXU2 614 aaKnown RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 ARHGAP15Q53QZ3 475 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 C2CD6Q53TS8 623 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 EFHC1Q5JVL4 640 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 ATAT1Q5SQI0 421 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 BTBD8Q5XKL5 378 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 ANKRD54Q6NXT1 300 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 PDZD4Q76G19 769 aaPredicted RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 TADA2BQ86TJ2 420 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 ZDHHC17Q8IUH5 632 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 MCOLN2Q8IZK6 566 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 TTC16Q8NEE8 873 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 PDZD8Q8NEN9 1154 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 MRPS31Q92665 395 aaKnown RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 PSMG2Q969U7 264 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 CPXM1Q96SM3 734 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 EIF3CQ99613 913 aaKnown RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 DESI2Q9BSY9 194 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 TRIM62Q9BVG3 475 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 PRKD2Q9BZL6 878 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 ATXN3LQ9H3M9 355 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 TRPC7Q9HCX4 862 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 MRPL47Q9HD33 250 aaKnown RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 CYLDQ9NQC7 956 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 CNGB3Q9NQW8 809 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 TLR8Q9NR97 1041 aaKnown RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 PARVAQ9NVD7 372 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 COMMD8Q9NX08 183 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 TAS2R14Q9NYV8 317 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 CTTNBP2NLQ9P2B4 639 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 WDR35Q9P2L0 1181 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 CNOT8Q9UFF9 292 aaKnown RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 PCDHA13Q9Y5I0 950 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 SCINQ9Y6U3 715 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 LAMA2P24043 3122 aaKnown RBP9.38□□□□□ -0.91
BRCC3-210ENST00000630295 LAMA3Q16787 3333 aa9.38□□□□□ -0.91
BRCC3-210ENST00000630295 MYO9BQ13459 2157 aa9.37□□□□□ -0.91
BRCC3-210ENST00000630295 GBF1Q92538 1859 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms