RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 AGFG1P52594 562 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 IRX3P78415 501 aaPredicted RBP6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 ATP8B2P98198 1209 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 TLE1Q04724 770 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 SP140Q13342 867 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 MTM1Q13496 603 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 GRB14Q14449 540 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 FAM47AQ5JRC9 791 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 KIAA1755Q5JYT7 1200 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 DARS2Q6PI48 645 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 DZIP1Q86YF9 867 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 CASKIN2Q8WXE0 1202 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 ASB2Q96Q27 587 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 AGO3Q9H9G7 860 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 L1RE1Q9UN81 338 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 A0A088AWK7 358 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 SLC15A5A6NIM6 579 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 TEX33O43247 280 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 TRIM13O60858 407 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 ALOX15P16050 662 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 CTXN1P60606 82 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 FAM193AP78312 1265 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 CREMQ03060 361 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 TFCP2Q12800 502 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 FGL2Q14314 439 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 SURF1Q15526 300 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 RNF220Q5VTB9 566 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 AFMIDQ63HM1 303 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 IL31Q6EBC2 164 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 CATSPERGQ6ZRH7 1159 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 MAPKAPK5Q8IW41 473 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 GPR135Q8IZ08 494 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 MTFMTQ96DP5 389 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 SLC35A4Q96G79 324 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 FAM167AQ96KS9 214 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 ENKD1Q9H0I2 346 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 EPHX3Q9H6B9 360 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 SEC61A2Q9H9S3 476 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 CHST12Q9NRB3 414 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 PNPOQ9NVS9 261 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 RABGAP1Q9Y3P9 1069 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 BDP1A6H8Y1 2624 aa6.87□□□□□ -1.31
HERPUD1-208ENST00000563911 PDS5AQ29RF7 1337 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 ZNF521Q96K83 1311 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 A0A1B0GUL7 405 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 A0A1W2PRG0 241 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 CFAP69A5D8W1 941 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 DBX1A6NMT0 343 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 C19orf81C9J6K1 198 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 KIAA0355O15063 1070 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 HOXA3O43365 443 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 GH2P01242 217 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 TYRP14679 529 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 BMP7P18075 431 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 ALDH1A3P47895 512 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 RAB1AP62820 205 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 DYNLL1P63167 89 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 NKX6-1P78426 367 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 TFF2Q03403 129 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 PTH1RQ03431 593 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 MRPL49Q13405 166 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 PLS1Q14651 629 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 CNN3Q15417 329 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 MFSD14CQ5VZR4 134 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 FAM111BQ6SJ93 734 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 TAX1BP1Q86VP1 789 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 TEX11Q8IYF3 940 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 FAM122AQ96E09 287 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 TMEM176AQ96HP8 235 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 C12orf42Q96LP6 360 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 MOV10L1Q9BXT6 1211 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 BHMT2Q9H2M3 363 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 AS3MTQ9HBK9 375 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 GNL3LQ9NVN8 582 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 AATFQ9NY61 560 aaKnown RBP eCLIP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 TMOD4Q9NZQ9 345 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 PI4KBQ9UBF8 816 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 FEZ2Q9UHY8 353 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 HERC5Q9UII4 1024 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 PCDHGB6Q9Y5F9 930 aa6.86□□□□□ -1.31
HERPUD1-208ENST00000563911 ZNF536O15090 1300 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 FLT1P17948 1338 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 ANO9A1A5B4 782 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 SMIM22K7EJ46 135 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 GOLIM4O00461 696 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 SEPT4O43236 478 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 LAMTOR5O43504 91 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 STC2O76061 302 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 PGK1P00558 417 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 ASNSP08243 561 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 ADORA2AP29274 412 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 IL15P40933 162 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 NEK3P51956 506 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 BRD3Q15059 726 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 FAM214AQ32MH5 1076 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 FLYWCH1Q4VC44 716 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 WDR78Q5VTH9 848 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 MAEAQ7L5Y9 396 aa6.85□□□□□ -1.31
HERPUD1-208ENST00000563911 SIAH1Q8IUQ4 282 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms