RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TGS1Q96RS0 853 aaKnown RBP17.99■□□□□ 0.47
PTPN21-208ENST00000556564 STAT4Q14765 748 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 HSDL1Q3SXM5 330 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 BEND6Q5SZJ8 279 aaPredicted RBP17.99■□□□□ 0.47
PTPN21-208ENST00000556564 MEI1Q5TIA1 1274 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 OSGEPQ9NPF4 335 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 CBWD6Q4V339 395 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 TFDP3Q5H9I0 405 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 CBWD3Q5JTY5 395 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 CBWD5Q5RIA9 395 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 LINC00523Q86TU6 105 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 CALCAP01258 141 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 CARSP49589 748 aaKnown RBP17.99■□□□□ 0.47
PTPN21-208ENST00000556564 C3orf62Q6ZUJ4 267 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 DUSP10Q9Y6W6 482 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 PCDH8O95206 1070 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 AMPD2Q01433 879 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 TBCCQ15814 346 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 FSCBQ5H9T9 825 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 TPGS1Q6ZTW0 290 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 ETNPPLQ8TBG4 499 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 CORO1BQ9BR76 489 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 KCPQ6ZWJ8 1503 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 PTK2BQ14289 1009 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 IFNL1Q8IU54 200 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 PPIL6Q8IXY8 311 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 LGI2Q8N0V4 545 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 CALML6Q8TD86 181 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 TXLNGQ9NUQ3 528 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 PLAGL2Q9UPG8 496 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 TMEM86AQ8N2M4 240 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 TRIM33Q9UPN9 1127 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 SF3B1O75533 1304 aaKnown RBP eCLIP17.98■□□□□ 0.47
PTPN21-208ENST00000556564 PPP2R2AP63151 447 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 SFSWAPQ12872 951 aaKnown RBP17.98■□□□□ 0.47
PTPN21-208ENST00000556564 ERMARDQ5T6L9 678 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 IL17RAQ96F46 866 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 CDT1Q9H211 546 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 TRABDQ9H4I3 376 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 SCAMP3O14828 347 aaKnown RBP17.98■□□□□ 0.47
PTPN21-208ENST00000556564 SEPT4O43236 478 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 CYP2F1P24903 491 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 CES5AQ6NT32 575 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 RNPEPQ9H4A4 650 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 SENP1Q9P0U3 644 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 DDX20Q9UHI6 824 aaKnown RBP17.98■□□□□ 0.47
PTPN21-208ENST00000556564 FDFT1P37268 417 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 UGP2Q16851 508 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 SLC13A5Q86YT5 568 aaPredicted RBP17.98■□□□□ 0.47
PTPN21-208ENST00000556564 UBXN6Q9BZV1 441 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 MFSD1Q9H3U5 465 aa17.98■□□□□ 0.47
PTPN21-208ENST00000556564 FGRP09769 529 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 PTPN1P18031 435 aaKnown RBP17.97■□□□□ 0.47
PTPN21-208ENST00000556564 NAA30Q147X3 362 aaPredicted RBP17.97■□□□□ 0.47
PTPN21-208ENST00000556564 USP38Q8NB14 1042 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 FICDQ9BVA6 458 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 SLC27A5Q9Y2P5 690 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 ADRB2P07550 413 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 TMCO4Q5TGY1 634 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 HIPK4Q8NE63 616 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 USP13Q92995 863 aaPredicted RBP17.97■□□□□ 0.47
PTPN21-208ENST00000556564 OR1E1P30953 314 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 OTUD4Q01804 1114 aaKnown RBP17.97■□□□□ 0.47
PTPN21-208ENST00000556564 PTK7Q13308 1070 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 TMEM161BQ8NDZ6 487 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 KAT2BQ92831 832 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 XPO6Q96QU8 1125 aaKnown RBP17.97■□□□□ 0.47
PTPN21-208ENST00000556564 SERPINI1Q99574 410 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 APOL2Q9BQE5 337 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 TUBB6Q9BUF5 446 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 ADGRA2Q96PE1 1338 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 SPECC1L-ADORA2AF8WAN1 911 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 ANO5Q75V66 913 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 UBP1Q9NZI7 540 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 TUBP50607 506 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 SCNN1BP51168 640 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 COG1Q8WTW3 980 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 KLHL29Q96CT2 875 aa17.97■□□□□ 0.47
PTPN21-208ENST00000556564 TREHO43280 583 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 SPATA31D3P0C874 917 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 SMPD1P17405 629 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 MAGEA4P43358 317 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 RGS4P49798 205 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 PLPP4Q5VZY2 271 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 SPOCD1Q6ZMY3 1216 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 SPATA31D4Q6ZUB0 917 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 ANKS3Q6ZW76 656 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 ARL8AQ96BM9 186 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 AAR2Q9Y312 384 aaKnown RBP17.96■□□□□ 0.47
PTPN21-208ENST00000556564 ROBO3Q96MS0 1386 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 E2F4Q16254 413 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 FNDC3BQ53EP0 1204 aaKnown RBP17.96■□□□□ 0.47
PTPN21-208ENST00000556564 DDX42Q86XP3 938 aaKnown RBP eCLIP17.96■□□□□ 0.47
PTPN21-208ENST00000556564 DEFB106AQ8N104 65 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 DUSP9Q99956 384 aaKnown RBP17.96■□□□□ 0.47
PTPN21-208ENST00000556564 OPHN1O60890 802 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 ECM1Q16610 540 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 MCOLN2Q8IZK6 566 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 PDLIM2Q96JY6 352 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 CEP41Q9BYV8 373 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms