RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 BOLA3Q53S33 107 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 LHX8Q68G74 356 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 AGMOQ6ZNB7 445 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 ZNF280BQ86YH2 543 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 USP33Q8TEY7 942 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 SREK1Q8WXA9 508 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 KATNBL1Q9H079 304 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 PAK6Q9NQU5 681 aaPredicted RBP9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 DNAJB4Q9UDY4 337 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 FAM50BQ9Y247 325 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 SCAMP3O14828 347 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 HEXIM1O94992 359 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 KCNE1P15382 129 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 DR1Q01658 176 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 CSGALNACT1Q8TDX6 532 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 NKX2-4Q9H2Z4 354 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 ELAC1Q9H777 363 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 TLR9Q9NR96 1032 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 STXBP5LQ9Y2K9 1186 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 ZNF197O14709 1029 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 PPEF2O14830 753 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 PFDN6O15212 129 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 RARGP13631 454 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 LMO2P25791 158 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 GDAP1Q8TB36 358 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 KLC2Q9H0B6 622 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 NRDE2Q9H7Z3 1164 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 PDLIM7Q9NR12 457 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 MARCH2Q9P0N8 246 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 SLC12A2P55011 1212 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 ATAT1Q5SQI0 421 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 RARS2Q5T160 578 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 CCDC91Q7Z6B0 441 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 COLGALT1Q8NBJ5 622 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 KREMEN2Q8NCW0 462 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 CCHCR1Q8TD31 782 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 C1orf54Q8WWF1 131 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 ZNF516Q92618 1163 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 KREMEN1Q96MU8 473 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 OSBPL9Q96SU4 736 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 EP400Q96L91 3159 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 HOXA11P31270 313 aaPredicted RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 EIF3EP60228 445 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 AMPD2Q01433 879 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 POF1BQ8WVV4 589 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 STMN4Q9H169 189 aaPredicted RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 ANO9A1A5B4 782 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 ZBTB42B2RXF5 422 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 GJB6O95452 261 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 VNN1O95497 513 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 CA4P22748 312 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 ETFBP38117 255 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 CHRDL2Q6WN34 429 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 PID1Q7Z2X4 250 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 PDLIM2Q96JY6 352 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 HSFY1Q96LI6 401 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 CFHR5Q9BXR6 569 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 IRX2Q9BZI1 471 aaPredicted RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 CLDND1Q9NY35 253 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 DNMT3LQ9UJW3 386 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 BUB1BO60566 1050 aaPredicted RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 WARSP23381 471 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 CDC25CP30307 473 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 MLLT1Q03111 559 aaPredicted RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 PLEKHG4Q58EX7 1191 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 VSTM1Q6UX27 236 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 FAM183BPQ6ZVS7 135 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 KDELC2Q7Z4H8 507 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 MAB21L3Q8N8X9 362 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 PCED1BQ96HM7 432 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 SUSD3Q96L08 255 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 APOBEC3GQ9HC16 384 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 RRN3Q9NYV6 651 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 USP18Q9UMW8 372 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 DDX3XO00571 662 aaKnown RBP eCLIP9.86□□□□□ -0.835e-8■■□□□ 13.6
GAPVD1-219ENST00000495955 XPO1O14980 1071 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 STBD1O95210 358 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 CPP00450 1065 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 ATP1A1P05023 1023 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 C8AP07357 584 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 HOXD13P35453 343 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 ITPRIPL1Q6GPH6 555 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 KLHL23Q8NBE8 558 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 CCDC68Q9H2F9 335 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 OSGEPQ9NPF4 335 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 AP4E1Q9UPM8 1137 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 MYBPHLA2RUH7 354 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 SOAT2O75908 522 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 GALTP07902 379 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 SOWAHAQ2M3V2 549 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 TPGS1Q6ZTW0 290 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 CMTR2Q8IYT2 770 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 UCMAQ8WVF2 138 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 GDAP1L1Q96MZ0 367 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 CIPCQ9C0C6 399 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 KCNF1Q9H3M0 494 aa9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 MRPL42Q9Y6G3 142 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-219ENST00000495955 PER2O15055 1255 aa9.85□□□□□ -0.83
GAPVD1-219ENST00000495955 NBNO60934 754 aa9.85□□□□□ -0.83
GAPVD1-219ENST00000495955 ZNF623O75123 536 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms