RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 CISHQ9NSE2 258 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 RBM12Q9NTZ6 932 aaKnown RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 GMIPQ9P107 970 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 COQ4Q9Y3A0 265 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 WNT6Q9Y6F9 365 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 NUP210Q8TEM1 1887 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-221ENST00000477561 MYO15AQ9UKN7 3530 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 PTPRDP23468 1912 aa8.76□□□□□ -1.01
HDAC6-221ENST00000477561 OBSL1O75147 1896 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 COL4A2P08572 1712 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 LEFTY2O00292 366 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 LAMTOR5O43504 91 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 MBL2P11226 248 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-221ENST00000477561 CTHP32929 405 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 IFNAR2P48551 515 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 RAD23BP54727 409 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 CSTF1Q05048 431 aaKnown RBP8.75□□□□□ -1.01
HDAC6-221ENST00000477561 MTAPQ13126 283 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 CUL2Q13617 745 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 RUNX3Q13761 415 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 IQCB1Q15051 598 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 NAIF1Q69YI7 327 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-221ENST00000477561 TSSK4Q6SA08 328 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 CLEC20AQ6ZU45 233 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 LUZP1Q86V48 1076 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 RALGPS2Q86X27 583 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-221ENST00000477561 MAML2Q8IZL2 1156 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-221ENST00000477561 OSCP1Q8WVF1 389 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 CLDN23Q96B33 292 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 TMEM176AQ96HP8 235 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 CCSER2Q9H7U1 834 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 CSNK1G1Q9HCP0 422 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 DUS2Q9NX74 493 aaKnown RBP8.75□□□□□ -1.01
HDAC6-221ENST00000477561 IL37Q9NZH6 218 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 ARHGAP26Q9UNA1 814 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 FARP1Q9Y4F1 1045 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-221ENST00000477561 CPQQ9Y646 472 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 R4GN57 208 aa8.75□□□□□ -1.01
HDAC6-221ENST00000477561 GREB1Q4ZG55 1949 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 DENND4CQ5VZ89 1909 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 HHLA1C9JL84 531 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 COCHO43405 550 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 OAS1P00973 400 aaKnown RBP8.74□□□□□ -1.01
HDAC6-221ENST00000477561 SP9P0CG40 484 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 CHRNB1P11230 501 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 ACO1P21399 889 aaKnown RBP8.74□□□□□ -1.01
HDAC6-221ENST00000477561 RPS9P46781 194 aaKnown RBP8.74□□□□□ -1.01
HDAC6-221ENST00000477561 PPP3CCP48454 512 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 PDE6CP51160 858 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 MLLT6P55198 1093 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-221ENST00000477561 MYL5Q02045 173 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 KCNH2Q12809 1159 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 USP4Q13107 963 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 GAS6Q14393 721 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 PDGFRLQ15198 375 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 EML3Q32P44 896 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 HECTD3Q5T447 861 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 Q6ZS52 159 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 RRAGAQ7L523 313 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 TRIM59Q8IWR1 403 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 DHX40Q8IX18 779 aaKnown RBP8.74□□□□□ -1.01
HDAC6-221ENST00000477561 AOPEPQ8N6M6 819 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 PDZD8Q8NEN9 1154 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 ENOX1Q8TC92 643 aaKnown RBP8.74□□□□□ -1.01
HDAC6-221ENST00000477561 KAT5Q92993 513 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 CHFRQ96EP1 664 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 MED15Q96RN5 788 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 DUSP16Q9BY84 665 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 DNAI2Q9GZS0 605 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 ECT2Q9H8V3 914 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 CFAP97Q9P2B7 532 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 RWDD2AQ9UIY3 292 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 NUDT5Q9UKK9 219 aa8.74□□□□□ -1.01
HDAC6-221ENST00000477561 A0A1W2PQH9 124 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 FAM92AA1XBS5 289 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 CYP26A1O43174 497 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 GNA14O95837 355 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 OLFM2O95897 454 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 TBX18O95935 607 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 CALCAP01258 141 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 AFPP02771 609 aaKnown RBP8.73□□□□□ -1.01
HDAC6-221ENST00000477561 ZDHHC11BP0C7U3 371 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 IRF1P10914 325 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 CD19P15391 556 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 GJA4P35212 333 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 NBL1P41271 181 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 GALK1P51570 392 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 SLC7A9P82251 487 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 CCDC173Q0VFZ6 552 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 GOLGA7BQ2TAP0 167 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 FOXR2Q6PJQ5 311 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 TMEM270Q6UE05 265 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 ARHGEF19Q8IW93 802 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 PPM1KQ8N3J5 372 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 CPA6Q8N4T0 437 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 TTC39CQ8N584 583 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 EHBP1Q8NDI1 1231 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 LMO3Q8TAP4 145 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 UBA3Q8TBC4 463 aa8.73□□□□□ -1.01
HDAC6-221ENST00000477561 OVCA2Q8WZ82 227 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms