RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SUMF1Q8NBK3 374 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 HNRNPABQ99729 332 aaKnown RBP20.04■□□□□ 0.8
COL5A1-203ENST00000460264 COMMD8Q9NX08 183 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 SMPD4Q9NXE4 827 aa20.04■□□□□ 0.8
COL5A1-203ENST00000460264 PSMA7O14818 248 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 PAPSS2O95340 614 aaPredicted RBP20.03■□□□□ 0.8
COL5A1-203ENST00000460264 CD44P16070 742 aaKnown RBP20.03■□□□□ 0.8
COL5A1-203ENST00000460264 NRLP54845 237 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 MAP3K7CLP57077 242 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 GRSF1Q12849 480 aaKnown RBP eCLIP20.03■□□□□ 0.8
COL5A1-203ENST00000460264 STIM1Q13586 685 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 CBWD6Q4V339 395 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 CBWD3Q5JTY5 395 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 CBWD5Q5RIA9 395 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 TCERG1LQ5VWI1 586 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 SNX30Q5VWJ9 437 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 NAIF1Q69YI7 327 aaPredicted RBP20.03■□□□□ 0.8
COL5A1-203ENST00000460264 ISM2Q6H9L7 571 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 KIAA1958Q8N8K9 716 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 FAXDC2Q96IV6 333 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 LINC00597Q9H2U6 94 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 C2orf42Q9NWW7 574 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 RAB20Q9NX57 234 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 GMIPQ9P107 970 aa20.03■□□□□ 0.8
COL5A1-203ENST00000460264 CHORDC1Q9UHD1 332 aaPredicted RBP20.03■□□□□ 0.8
COL5A1-203ENST00000460264 COCHO43405 550 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 NFATC1O95644 943 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 ZDHHC11BP0C7U3 371 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 MBL2P11226 248 aaPredicted RBP20.02■□□□□ 0.8
COL5A1-203ENST00000460264 TUBP50607 506 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 PKN3Q6P5Z2 889 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 CLEC20AQ6ZU45 233 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 GPRIN1Q7Z2K8 1008 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 CYFIP2Q96F07 1278 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 DHTKD1Q96HY7 919 aaPredicted RBP20.02■□□□□ 0.8
COL5A1-203ENST00000460264 ARID3AQ99856 593 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 P2RY13Q9BPV8 354 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 EPC1Q9H2F5 836 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 FBRSL1Q9HCM7 1045 aaKnown RBP20.02■□□□□ 0.8
COL5A1-203ENST00000460264 CFAP97Q9P2B7 532 aa20.02■□□□□ 0.8
COL5A1-203ENST00000460264 ARMCX3Q9UH62 379 aaPredicted RBP20.02■□□□□ 0.8
COL5A1-203ENST00000460264 MYOFQ9NZM1 2061 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 K7ESF4 209 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 EGFP01133 1207 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 BMP6P22004 513 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 GALK1P51570 392 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 HECTD3Q5T447 861 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 FILIP1Q7Z7B0 1213 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 DDX42Q86XP3 938 aaKnown RBP eCLIP20.01■□□□□ 0.79
COL5A1-203ENST00000460264 TTC39CQ8N584 583 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 SLC35C1Q96A29 364 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 ZFRQ96KR1 1074 aaKnown RBP20.01■□□□□ 0.79
COL5A1-203ENST00000460264 DNAI2Q9GZS0 605 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 FBXO44Q9H4M3 255 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 CCSER2Q9H7U1 834 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 CISHQ9NSE2 258 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 COQ4Q9Y3A0 265 aa20.01■□□□□ 0.79
COL5A1-203ENST00000460264 HHLA1C9JL84 531 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 SCAMP3O14828 347 aaKnown RBP20■□□□□ 0.79
COL5A1-203ENST00000460264 DRD1P21728 446 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 PPP1R2P41236 205 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 PGFP49763 221 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 DMWDQ09019 674 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 NR1H3Q13133 447 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 KLHL10Q6JEL2 608 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 TTI2Q6NXR4 508 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 TATDN2Q93075 761 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 EXOC4Q96A65 974 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 JAKMIP2Q96AA8 810 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 FAM124BQ9H5Z6 455 aaPredicted RBP20■□□□□ 0.79
COL5A1-203ENST00000460264 PNPLA8Q9NP80 782 aa20■□□□□ 0.79
COL5A1-203ENST00000460264 SMG5Q9UPR3 1016 aaKnown RBP20■□□□□ 0.79
COL5A1-203ENST00000460264 PPP1R3GB7ZBB8 358 aa19.99■□□□□ 0.79
COL5A1-203ENST00000460264 SLC9A3R1O14745 358 aaPredicted RBP19.99■□□□□ 0.79
COL5A1-203ENST00000460264 CYP17A1P05093 508 aa19.99■□□□□ 0.79
COL5A1-203ENST00000460264 MORC3Q14149 939 aa19.99■□□□□ 0.79
COL5A1-203ENST00000460264 GAB4Q2WGN9 574 aa19.99■□□□□ 0.79
COL5A1-203ENST00000460264 ZNF394Q53GI3 561 aa19.99■□□□□ 0.79
COL5A1-203ENST00000460264 PPP1R26Q5T8A7 1209 aaPredicted RBP19.99■□□□□ 0.79
COL5A1-203ENST00000460264 SLC4A11Q8NBS3 891 aa19.99■□□□□ 0.79
COL5A1-203ENST00000460264 RUBCNQ92622 972 aa19.99■□□□□ 0.79
COL5A1-203ENST00000460264 EZH1Q92800 747 aaPredicted RBP19.99■□□□□ 0.79
COL5A1-203ENST00000460264 CD101Q93033 1021 aa19.99■□□□□ 0.79
COL5A1-203ENST00000460264 CEP63Q96MT8 703 aa19.99■□□□□ 0.79
COL5A1-203ENST00000460264 DUSP9Q99956 384 aaKnown RBP19.99■□□□□ 0.79
COL5A1-203ENST00000460264 TLR8Q9NR97 1041 aaKnown RBP19.99■□□□□ 0.79
COL5A1-203ENST00000460264 SCML2Q9UQR0 700 aa19.99■□□□□ 0.79
COL5A1-203ENST00000460264 DMXL1Q9Y485 3027 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 CHURC1-FNTBB4DL54 471 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 BIN1O00499 593 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 CYP26A1O43174 497 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 RNF40O75150 1001 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 HOXA6P31267 233 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 FNTBP49356 437 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 RAD23BP54727 409 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 FOXR2Q6PJQ5 311 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 NELFBQ8WX92 580 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 TMEM176AQ96HP8 235 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 HINFPQ9BQA5 517 aa19.98■□□□□ 0.79
COL5A1-203ENST00000460264 METTL14Q9HCE5 456 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms