RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 DLL3Q9NYJ7 618 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 TMX2Q9Y320 296 aa6.06□□□□□ -1.44
HMGB3P5-201ENST00000428894 SLIT2O94813 1529 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 A0A088AWK7 358 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 LINC01548A6NM66 108 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 EIF5BO60841 1220 aaKnown RBP6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 ONECUT2O95948 504 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 NCLP19338 710 aaKnown RBP6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 VIPR2P41587 438 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 RAB27AP51159 221 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 PDE1AP54750 535 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 UCP3P55916 312 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 EEFSECP57772 596 aaKnown RBP6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 RAB1AP62820 205 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 LLGL1Q15334 1064 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 SRSF7Q16629 238 aaKnown RBP eCLIP6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 AARS2Q5JTZ9 985 aaKnown RBP6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 ZNF782Q6ZMW2 699 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 DENND1CQ8IV53 801 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 TBC1D5Q92609 795 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 PIH1D1Q9NWS0 290 aaKnown RBP6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 NDRG4Q9ULP0 352 aaKnown RBP6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 SHOC2Q9UQ13 582 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 MED16Q9Y2X0 877 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 NRXN3Q9Y4C0 1643 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 HFM1A2PYH4 1435 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 GLI3P10071 1580 aa6.05□□□□□ -1.44
HMGB3P5-201ENST00000428894 hCG_1984214I3L0E3 225 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 MYO1CO00159 1063 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 AKAP10O43572 662 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 ERBB2P04626 1255 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 THP07101 528 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 FESP07332 822 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 HTR1BP28222 390 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 PCID2Q5JVF3 399 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 LRCH2Q5VUJ6 765 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 TPH2Q8IWU9 490 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 FAM177A1Q8N128 213 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 LRRC71Q8N4P6 559 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 GLG1Q92896 1179 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 AIFM3Q96NN9 605 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 P2RX7Q99572 595 aaKnown RBP6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 RTFDC1Q9BY42 306 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 GLOD4Q9HC38 313 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 NMRK2Q9NPI5 230 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 FLRT1Q9NZU1 646 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 RNF7Q9UBF6 113 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 SH2B3Q9UQQ2 575 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 MRPS17Q9Y2R5 130 aaKnown RBP6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 NUP155O75694 1391 aa6.04□□□□□ -1.44
HMGB3P5-201ENST00000428894 RGPD1P0DJD0 1748 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 NWD2Q9ULI1 1742 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 A1L4Q6 167 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 WDR91A4D1P6 747 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 H3BML4 177 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 ZNF213O14771 459 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 UBXN7O94888 489 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 ENGP17813 658 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 SLC11A2P49281 568 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 SATB1Q01826 763 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 PROSER3Q2NL68 480 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 ZNF804AQ7Z570 1209 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 DAAM2Q86T65 1068 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 PPP1R35Q8TAP8 253 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 SLC35G2Q8TBE7 412 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 REPS1Q96D71 796 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 DUSP22Q9NRW4 184 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 GABBR1Q9UBS5 961 aa6.03□□□□□ -1.44
HMGB3P5-201ENST00000428894 PXDNQ92626 1479 aa6.02□□□□□ -1.44
HMGB3P5-201ENST00000428894 RPGRIP1LQ68CZ1 1315 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 KIF1BO60333 1816 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 LRPAP1P30533 357 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 ZNF81P51508 661 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 ATXN1P54253 815 aaKnown RBP6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 EZH2Q15910 746 aaKnown RBP6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 PAPD7Q5XG87 772 aaKnown RBP6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 B3GNT9Q6UX72 402 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 PARS2Q7L3T8 475 aaKnown RBP6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 KRT28Q7Z3Y7 464 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 ZNF280BQ86YH2 543 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 SLC15A4Q8N697 577 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 DNAJC5GQ8N7S2 189 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 VGLL2Q8N8G2 317 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 SMG7Q92540 1137 aaKnown RBP6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 R3HDM4Q96D70 268 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 NT5C1BQ96P26 610 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 ACO2Q99798 780 aaKnown RBP6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 CCNL1Q9UK58 526 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 FNDC1Q4ZHG4 1894 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 PARD3Q8TEW0 1356 aa6.02□□□□□ -1.45
HMGB3P5-201ENST00000428894 CCDC144AA2RUR9 1427 aa6.01□□□□□ -1.45
HMGB3P5-201ENST00000428894 PRAG1Q86YV5 1406 aa6.01□□□□□ -1.45
HMGB3P5-201ENST00000428894 SMIM22K7EJ46 135 aa6.01□□□□□ -1.45
HMGB3P5-201ENST00000428894 ERC2O15083 957 aa6.01□□□□□ -1.45
HMGB3P5-201ENST00000428894 NHLRC4P0CG21 123 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P5-201ENST00000428894 CYP2C9P11712 490 aa6.01□□□□□ -1.45
HMGB3P5-201ENST00000428894 XRCC6P12956 609 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB3P5-201ENST00000428894 MYO1EQ12965 1108 aa6.01□□□□□ -1.45
HMGB3P5-201ENST00000428894 PRAMEF17Q5VTA0 474 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms