RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ITGB1P05556 798 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 PDHA1P08559 390 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 LMO2P25791 158 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 LONP1P36776 959 aaKnown RBP5.94□□□□□ -1.46
CD47-201ENST00000355354 SNRPNP63162 240 aaKnown RBP5.94□□□□□ -1.46
CD47-201ENST00000355354 GRM1Q13255 1194 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 BAATQ14032 418 aaPredicted RBP5.94□□□□□ -1.46
CD47-201ENST00000355354 PAN2Q504Q3 1202 aaKnown RBP5.94□□□□□ -1.46
CD47-201ENST00000355354 C8orf74Q6P047 294 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 NAPRTQ6XQN6 538 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 ZNF444Q8N0Y2 327 aaPredicted RBP5.94□□□□□ -1.46
CD47-201ENST00000355354 C3orf58Q8NDZ4 430 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 ZNF483Q8TF39 744 aaPredicted RBP5.94□□□□□ -1.46
CD47-201ENST00000355354 MARK4Q96L34 752 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 HBEGFQ99075 208 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 ALOXE3Q9BYJ1 711 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 RNF208Q9H0X6 261 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 TRAF3IP3Q9Y228 551 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 MUC22E2RYF6 1773 aaPredicted RBP5.94□□□□□ -1.46
CD47-201ENST00000355354 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.94□□□□□ -1.46
CD47-201ENST00000355354 ZBTB14O43829 449 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 HSPA9P38646 679 aaKnown RBP5.94□□□□□ -1.46
CD47-201ENST00000355354 MMP13P45452 471 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 NCOA4Q13772 614 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 C11orf63Q6NUN7 778 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 ADGRF2Q8IZF7 708 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 MCOLN2Q8IZK6 566 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 MYOCDQ8IZQ8 938 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 TMEM151AQ8N4L1 468 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 ATXN7L3BQ96GX2 97 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 UBAP1Q9NZ09 502 aa5.94□□□□□ -1.46
CD47-201ENST00000355354 G3BP2Q9UN86 482 aaKnown RBP5.94□□□□□ -1.46
CD47-201ENST00000355354 WDR46O15213 610 aaKnown RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 ANP32DO95626 131 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 LTFP02788 710 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 ZCCHC18P0CG32 403 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 GSTO1P78417 241 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 KRT71Q3SY84 523 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 NECAB2Q7Z6G3 386 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 CMC1Q7Z7K0 106 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 UBLCP1Q8WVY7 318 aaPredicted RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 DRG1Q9Y295 367 aaKnown RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 MALRD1Q5VYJ5 2156 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 ATXN2Q99700 1313 aaKnown RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 KRIT1O00522 736 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 TIMP1P01033 207 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 TFPTP0C1Z6 253 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 CSH1P0DML2 217 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 CSH2P0DML3 217 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 CYP11B1P15538 503 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 TGFBR1P36897 503 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 PBX3P40426 434 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 MBTPS1Q14703 1052 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 KIF22Q14807 665 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 ARL6IP4Q66PJ3 421 aaKnown RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 NOX5Q96PH1 765 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 DPEP3Q9H4B8 488 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 MROH8Q9H579 483 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 HMX1Q9NP08 348 aaPredicted RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 PCMTD2Q9NV79 361 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 PRKAG3Q9UGI9 489 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 SWAP70Q9UH65 585 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 PLA2G4CQ9UP65 541 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.93□□□□□ -1.46
CD47-201ENST00000355354 SORL1Q92673 2214 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 ANAPC1Q9H1A4 1944 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 BRD2P25440 801 aaKnown RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 HOXD10P28358 340 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 SKOR1P84550 965 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 SOX4Q06945 474 aaPredicted RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 TRIM29Q14134 588 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 EDRF1Q3B7T1 1238 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 FILIP1LQ4L180 1135 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 OTUD1Q5VV17 481 aaPredicted RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 OTOAQ7RTW8 1153 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 AFAP1L1Q8TED9 768 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 HIVEP1P15822 2718 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 RIPK2O43353 540 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 RGS2P41220 211 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 PSMC5P62195 406 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 SPARCL1Q14515 664 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 TUBB8Q3ZCM7 444 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 PCNX4Q63HM2 1172 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 POTEHQ6S545 545 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 C15orf39Q6ZRI6 1047 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 TMCO2Q7Z6W1 182 aaPredicted RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 ZSCAN18Q8TBC5 510 aaPredicted RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 ATP6V1G3Q96LB4 118 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 ZFP42Q96MM3 310 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 FAM213AQ9BRX8 229 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 HTATIP2Q9BUP3 242 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 RPAP3Q9H6T3 665 aaPredicted RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 BAIAP2L1Q9UHR4 511 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 AGO1Q9UL18 857 aaKnown RBP5.93□□□□□ -1.46
CD47-201ENST00000355354 TNCP24821 2201 aa5.93□□□□□ -1.46
CD47-201ENST00000355354 PSMA7O14818 248 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 MGRN1O60291 552 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 LRCH4O75427 683 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 WFS1O76024 890 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 FYNP06241 537 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms