RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 GRAPQ13588 217 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 EFHC1Q5JVL4 640 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 SPATA21Q7Z572 469 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 GRAPLQ8TC17 118 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 CDK5RAP1Q96SZ6 601 aaKnown RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 LRRC4BQ9NT99 713 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 PAK5Q9P286 719 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 RAD54BQ9Y620 910 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 ARID1BQ8NFD5 2236 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 ECE2O60344 883 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 MTA2O94776 668 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 PDGFRAP16234 1089 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 S100A1P23297 94 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 GGCXP38435 758 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 HALP42357 657 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 ARF3P61204 181 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 ARF1P84077 181 aaKnown RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 PTH1RQ03431 593 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 DMPKQ09013 629 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 TERF2Q15554 542 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 OLFML2AQ68BL7 652 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 ZNF746Q6NUN9 644 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 ITIH5Q86UX2 942 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 STK39Q9UEW8 545 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 TDRKHQ9Y2W6 561 aaKnown RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 PIK3C2GO75747 1445 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 FLT1P17948 1338 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 CYP27B1O15528 508 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 HOXA2O43364 376 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 FGFR2P21802 821 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 HOXC12P31275 282 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 GCLCP48506 637 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 RPL19P84098 196 aaKnown RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 PTK7Q13308 1070 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 REPS1Q96D71 796 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 EPB41L4BQ9H329 900 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 WDCPQ9H6R7 721 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 MARCOQ9UEW3 520 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 SPEF1Q9Y4P9 236 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 MAP3K1Q13233 1512 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 SHROOM3Q8TF72 1996 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 NCF1BA6NI72 391 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 NCF1CA8MVU1 366 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 URODP06132 367 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 NCF1P14598 390 aaPredicted RBP7.78□□□□□ -1.16
PRDM2-201ENST00000235372 SCP2P22307 547 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 FGFR4P22455 802 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 FCGRTP55899 365 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 FAM171BQ6P995 826 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 NT5C1AQ9BXI3 368 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 EMSYQ7Z589 1322 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 KPNA6O60684 536 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 ATP6V1B2P21281 511 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 CDC25AP30304 524 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 LGALS3BPQ08380 585 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 DPCR1Q3MIW9 517 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 NOTUMQ6P988 496 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 MSANTD1Q6ZTZ1 278 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 VSTM4Q8IW00 320 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 DUSP12Q9UNI6 340 aa7.78□□□□□ -1.16
PRDM2-201ENST00000235372 E2F8A0AVK6 867 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 KPNA5O15131 536 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 KCNA6P17658 529 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 CYP2A7P20853 494 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 TAF2Q6P1X5 1199 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 RASSF6Q6ZTQ3 369 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 ZCCHC2Q9C0B9 1178 aaKnown RBP7.77□□□□□ -1.16
PRDM2-201ENST00000235372 POLR1BQ9H9Y6 1135 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 SOHLH2Q9NX45 425 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 TMEM63CQ9P1W3 806 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 ZNF232Q9UNY5 417 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 ARIH1Q9Y4X5 557 aaPredicted RBP7.77□□□□□ -1.16
PRDM2-201ENST00000235372 PCDHA10Q9Y5I2 948 aa7.77□□□□□ -1.16
PRDM2-201ENST00000235372 DNMT1P26358 1616 aaKnown RBP7.77□□□□□ -1.17
PRDM2-201ENST00000235372 BCLAF3A2AJT9 711 aaKnown RBP7.77□□□□□ -1.17
PRDM2-201ENST00000235372 KHDRBS3O75525 346 aaKnown RBP7.77□□□□□ -1.17
PRDM2-201ENST00000235372 STARP49675 285 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 TRIP10Q15642 601 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 TRMT11Q7Z4G4 463 aaKnown RBP7.77□□□□□ -1.17
PRDM2-201ENST00000235372 AGGF1Q8N302 714 aaeCLIP7.77□□□□□ -1.173e-6■■□□□ 14
PRDM2-201ENST00000235372 MCEEQ96PE7 176 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 INTS7Q9NVH2 962 aaKnown RBP7.77□□□□□ -1.17
PRDM2-201ENST00000235372 EVPLQ92817 2033 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 EFCAB10A6NFE3 127 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 CRTAMO95727 393 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 PTSQ03393 145 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 SPP2Q13103 211 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 ZNHIT3Q15649 155 aaPredicted RBP7.77□□□□□ -1.17
PRDM2-201ENST00000235372 SCARA3Q6AZY7 606 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 DSG4Q86SJ6 1040 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 UBASH3BQ8TF42 649 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 GPRASP2Q96D09 838 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 SLC35C2Q9NQQ7 365 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 COMMD8Q9NX08 183 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 IL1RAPL1Q9NZN1 696 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 MTMR6Q9Y217 621 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 ENTPD4Q9Y227 616 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 ERBB4Q15303 1308 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 GRXCR2A6NFK2 248 aa7.77□□□□□ -1.17
PRDM2-201ENST00000235372 TEX46H3BTG2 121 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms