RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 TSPAN18Q96SJ8 248 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 CCSER2Q9H7U1 834 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 ABCB10Q9NRK6 738 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 PSMC3IPQ9P2W1 217 aaPredicted RBP11.46□□□□□ -0.57
MSH6-201ENST00000234420 RCOR1Q9UKL0 485 aa11.46□□□□□ -0.57
MSH6-201ENST00000234420 FTLP02792 175 aaPredicted RBP11.46□□□□□ -0.58
MSH6-201ENST00000234420 TUFMP49411 452 aaKnown RBP11.46□□□□□ -0.58
MSH6-201ENST00000234420 CASP4P49662 377 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 PRELPP51888 382 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 JAK3P52333 1124 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 CUL4AQ13619 759 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 POLD3Q15054 466 aaPredicted RBP11.46□□□□□ -0.58
MSH6-201ENST00000234420 PROSER3Q2NL68 480 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 TAF2Q6P1X5 1199 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 LRRC6Q86X45 466 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 AK8Q96MA6 479 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 ZNF224Q9NZL3 707 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 COPG2Q9UBF2 871 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 PADI4Q9UM07 663 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 FZD1Q9UP38 647 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 NCKAP1Q9Y2A7 1128 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 PNMA8CA0A1B0GUJ8 204 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 POMCP01189 267 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 PGK2P07205 417 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 VCLP18206 1134 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 SNX17Q15036 470 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 P3H1Q32P28 736 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 GALNT17Q6IS24 598 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 PARGQ86W56 976 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 SKA1Q96BD8 255 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 KLHL1Q9NR64 748 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 SLC30A1Q9Y6M5 507 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 CITO14578 2027 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 ASB14A6NK59 587 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 PTGES3LE9PB15 166 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 ERICH5Q6P6B1 374 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 R3HCC1LQ7Z5L2 792 aaKnown RBP11.46□□□□□ -0.58
MSH6-201ENST00000234420 MIB1Q86YT6 1006 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 C11orf70Q9BRQ4 267 aa11.46□□□□□ -0.58
MSH6-201ENST00000234420 EVPLLA8MZ36 301 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 FAM20BO75063 409 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 ATP4AP20648 1035 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 EIF3EP60228 445 aaKnown RBP11.45□□□□□ -0.58
MSH6-201ENST00000234420 ACTR2P61160 394 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 AP3B2Q13367 1082 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 ARID3BQ8IVW6 561 aaPredicted RBP11.45□□□□□ -0.58
MSH6-201ENST00000234420 PIF1Q9H611 641 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 ERAP1Q9NZ08 941 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 SMARCAL1Q9NZC9 954 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 SLC9A2Q9UBY0 812 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 POTEIP0CG38 1075 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 CETPP11597 493 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 CDH3P22223 829 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 OCLNQ16625 522 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 POTEGQ6S5H5 508 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 EPHX4Q8IUS5 362 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 ADGRF4Q8IZF3 695 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 POC5Q8NA72 575 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 IPMKQ8NFU5 416 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 PIGBQ92521 554 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 GORASP1Q9BQQ3 440 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 CARD8Q9Y2G2 431 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 SSNA1O43805 119 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 ACSL4O60488 711 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 JAK1P23458 1154 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 STIP1P31948 543 aaKnown RBP11.45□□□□□ -0.58
MSH6-201ENST00000234420 PTK7Q13308 1070 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 C1DQ13901 141 aaKnown RBP11.45□□□□□ -0.58
MSH6-201ENST00000234420 LPIN1Q14693 890 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 FAAH2Q6GMR7 532 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 LRRC74BQ6ZQY2 392 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 MYCBPAPQ8TBZ2 947 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 UCMAQ8WVF2 138 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 ANKRD27Q96NW4 1050 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 RBM15Q96T37 977 aaKnown RBP eCLIP11.45□□□□□ -0.588e-10■■□□□ 12.9
MSH6-201ENST00000234420 WNT8AQ9H1J5 351 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 JPH1Q9HDC5 661 aaPredicted RBP11.45□□□□□ -0.58
MSH6-201ENST00000234420 AASDHPPTQ9NRN7 309 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 VAV3Q9UKW4 847 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 PRXQ9BXM0 1461 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 LAD1O00515 517 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 LRRC63Q05C16 580 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 C15orf59Q2T9L4 293 aaPredicted RBP11.45□□□□□ -0.58
MSH6-201ENST00000234420 EHD3Q9NZN3 535 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 EFCAB5A4FU69 1503 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 RRN3P2A6NIE6 340 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 LGALS16A8MUM7 142 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 AMD1P17707 334 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 GSSP48637 474 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 SUGP1Q8IWZ8 645 aaKnown RBP11.45□□□□□ -0.58
MSH6-201ENST00000234420 RHOBTB2Q9BYZ6 727 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 TMEM39BQ9GZU3 492 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 SH3GLB1Q9Y371 365 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 ARAP1Q96P48 1450 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 H2AFYO75367 372 aaKnown RBP11.45□□□□□ -0.58
MSH6-201ENST00000234420 LDHAP00338 332 aaKnown RBP11.45□□□□□ -0.58
MSH6-201ENST00000234420 APRTP07741 180 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.45□□□□□ -0.58
MSH6-201ENST00000234420 TMC4Q7Z404 712 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 OSBPL6Q9BZF3 934 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms