RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W IGD1P43598 195 aa2.38□□□□□ -2.03
RET3YPL010W SPG1P50088 95 aa2.38□□□□□ -2.03
RET3YPL010W YIL014C-AQ02598 104 aa2.38□□□□□ -2.03
RET3YPL010W RPS22BQ3E7Y3 130 aaKnown RBP2.38□□□□□ -2.03
RET3YPL010W HMRA2P0CY13 119 aa2.37□□□□□ -2.03
RET3YPL010W MRPL24P36525 258 aaPredicted RBP2.37□□□□□ -2.03
RET3YPL010W MBF1O14467 151 aaKnown RBP2.36□□□□□ -2.03
RET3YPL010W ATP15P21306 62 aa2.36□□□□□ -2.03
RET3YPL010W SHU1P38751 150 aa2.36□□□□□ -2.03
RET3YPL010W FMP16Q12497 93 aa2.36□□□□□ -2.03
RET3YPL010W YGR121W-AQ3E816 71 aa2.36□□□□□ -2.03
RET3YPL010W SEC4P07560 215 aaKnown RBP2.35□□□□□ -2.03
RET3YPL010W ATP16Q12165 160 aa2.35□□□□□ -2.03
RET3YPL010W ADH1P00330 348 aaKnown RBP2.34□□□□□ -2.03
RET3YPL010W QCR8P08525 94 aa2.34□□□□□ -2.03
RET3YPL010W YGL118CP53132 145 aa2.34□□□□□ -2.03
RET3YPL010W DDR2P89113 61 aa2.34□□□□□ -2.03
RET3YPL010W YML079WQ03629 201 aa2.34□□□□□ -2.03
RET3YPL010W ATP14Q12349 124 aa2.34□□□□□ -2.03
RET3YPL010W YKL023C-AQ2V2P3 75 aa2.34□□□□□ -2.03
RET3YPL010W COA3Q3E7B2 85 aa2.34□□□□□ -2.03
RET3YPL010W YCR024C-BQ3E7Z8 88 aa2.34□□□□□ -2.03
RET3YPL010W HAP3P13434 144 aa2.33□□□□□ -2.04
RET3YPL010W RPL29P05747 59 aaPredicted RBP2.32□□□□□ -2.04
RET3YPL010W RPL27BP0C2H7 136 aaKnown RBP2.32□□□□□ -2.04
RET3YPL010W KRE1P17260 313 aa2.32□□□□□ -2.04
RET3YPL010W COX10P21592 462 aa2.32□□□□□ -2.04
RET3YPL010W GSP1P32835 219 aaKnown RBP2.32□□□□□ -2.04
RET3YPL010W PEX17P40155 199 aa2.32□□□□□ -2.04
RET3YPL010W VMA21P41806 77 aa2.32□□□□□ -2.04
RET3YPL010W RPL26AP05743 127 aaKnown RBP2.31□□□□□ -2.04
RET3YPL010W RPL18AP0CX49 186 aaKnown RBP2.31□□□□□ -2.04
RET3YPL010W RPL18BP0CX50 186 aaKnown RBP2.31□□□□□ -2.04
RET3YPL010W SPT4P32914 102 aaPredicted RBP2.31□□□□□ -2.04
RET3YPL010W YHL018WP38744 120 aaPredicted RBP2.31□□□□□ -2.04
RET3YPL010W RPL26BP53221 127 aaKnown RBP2.31□□□□□ -2.04
RET3YPL010W YNL190WP53872 204 aa2.31□□□□□ -2.04
RET3YPL010W AIM11P87275 137 aa2.31□□□□□ -2.04
RET3YPL010W YAL063C-AQ3E791 96 aa2.31□□□□□ -2.04
RET3YPL010W YNL042W-BQ3E7Z2 85 aa2.31□□□□□ -2.04
RET3YPL010W ATG8P38182 117 aaRIP-Chip data2.3□□□□□ -2.04not detected
RET3YPL010W YMR103CQ04436 120 aa2.3□□□□□ -2.04
RET3YPL010W YPL257WQ08974 193 aa2.3□□□□□ -2.04
RET3YPL010W YLL006W-AQ3E814 58 aa2.3□□□□□ -2.04
RET3YPL010W YOR020W-AQ3E824 90 aa2.29□□□□□ -2.04
RET3YPL010W UGX2P32772 223 aa2.28□□□□□ -2.04
RET3YPL010W HPA2Q06592 156 aa2.28□□□□□ -2.04
RET3YPL010W RPL37BP51402 88 aaKnown RBP2.27□□□□□ -2.05
RET3YPL010W POP3P53833 195 aaPredicted RBP2.27□□□□□ -2.05
RET3YPL010W YPL261CQ08976 102 aa2.27□□□□□ -2.05
RET3YPL010W GSP2P32836 220 aaKnown RBP2.26□□□□□ -2.05
RET3YPL010W CYT2Q00873 224 aa2.26□□□□□ -2.05
RET3YPL010W ZEO1Q08245 113 aa2.26□□□□□ -2.05
RET3YPL010W PAU17Q12370 124 aa2.26□□□□□ -2.05
RET3YPL010W YLR236CA0A023PZG4 107 aa2.25□□□□□ -2.05
RET3YPL010W ATP5P09457 212 aa2.25□□□□□ -2.05
RET3YPL010W MRPL11P36521 249 aaPredicted RBP2.25□□□□□ -2.05
RET3YPL010W YPL073CP40323 161 aa2.25□□□□□ -2.05
RET3YPL010W BSC4P53841 131 aa2.25□□□□□ -2.05
RET3YPL010W YJL127C-BQ3E828 52 aa2.25□□□□□ -2.05
RET3YPL010W COX7P10174 60 aa2.24□□□□□ -2.05
RET3YPL010W YKR041WP36134 250 aa2.24□□□□□ -2.05
RET3YPL010W YHL005CP38752 130 aa2.24□□□□□ -2.05
RET3YPL010W RPL28P02406 149 aaKnown RBP2.23□□□□□ -2.05
RET3YPL010W FYV5P25585 152 aa2.23□□□□□ -2.05
RET3YPL010W YBR027CP38220 110 aa2.23□□□□□ -2.05
RET3YPL010W FYV4P38783 130 aaPredicted RBP2.23□□□□□ -2.05
RET3YPL010W MRPS12P53732 153 aa2.23□□□□□ -2.05
RET3YPL010W YNL122CP53921 115 aaPredicted RBP2.23□□□□□ -2.05
RET3YPL010W ICY1Q04329 127 aa2.23□□□□□ -2.05
RET3YPL010W YHR007C-AQ07074 71 aa2.23□□□□□ -2.05
RET3YPL010W YOR072WQ08486 104 aa2.23□□□□□ -2.05
RET3YPL010W YBR230W-AQ3E762 66 aa2.23□□□□□ -2.05
RET3YPL010W YDL022C-AP0C5L6 82 aa2.22□□□□□ -2.05
RET3YPL010W HHO1P53551 258 aa2.22□□□□□ -2.05
RET3YPL010W SCS22Q6Q595 175 aa2.22□□□□□ -2.05
RET3YPL010W YHR139C-AO13536 103 aa2.21□□□□□ -2.06
RET3YPL010W YER134CP40081 178 aa2.21□□□□□ -2.06
RET3YPL010W YFR057WP43625 151 aa2.21□□□□□ -2.06
RET3YPL010W IRC21Q04772 201 aa2.21□□□□□ -2.06
RET3YPL010W YLR050CQ12155 161 aaKnown RBP2.21□□□□□ -2.06
RET3YPL010W IGO2Q9P305 131 aa2.21□□□□□ -2.06
RET3YPL010W RPL36BO14455 100 aaKnown RBP2.2□□□□□ -2.06
RET3YPL010W YEL067CP39978 195 aa2.2□□□□□ -2.06
RET3YPL010W YIA6P40556 373 aa2.2□□□□□ -2.06
RET3YPL010W NSE4P43124 402 aa2.2□□□□□ -2.06
RET3YPL010W RGM1Q00453 211 aa2.2□□□□□ -2.06
RET3YPL010W BET1P22804 142 aa2.19□□□□□ -2.06
RET3YPL010W SFT1P43682 97 aa2.19□□□□□ -2.06
RET3YPL010W YKL044WP36092 106 aa2.18□□□□□ -2.06
RET3YPL010W GTT1P40582 234 aa2.18□□□□□ -2.06
RET3YPL010W MSA2P36157 363 aa2.17□□□□□ -2.06
RET3YPL010W YNL184CP53876 108 aa2.17□□□□□ -2.06
RET3YPL010W ARL3Q02804 198 aa2.17□□□□□ -2.06
RET3YPL010W CNL1Q06333 122 aa2.17□□□□□ -2.06
RET3YPL010W PAU23Q07987 124 aa2.17□□□□□ -2.06
RET3YPL010W FYV7Q12247 151 aa2.17□□□□□ -2.06
RET3YPL010W YLR157W-DP0CE99 70 aa2.16□□□□□ -2.06
RET3YPL010W OST2P46964 130 aa2.16□□□□□ -2.06
RET3YPL010W FYV12Q08559 129 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms