RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W YOL164W-AQ3E7A5 60 aa1.18□□□□□ -2.22
HSH49YOR319W GDB1Q06625 1536 aa1.17□□□□□ -2.22
HSH49YOR319W ECM12O13529 151 aa1.16□□□□□ -2.22
HSH49YOR319W RPA12P32529 125 aaKnown RBP1.15□□□□□ -2.23
HSH49YOR319W POL1P13382 1468 aa1.14□□□□□ -2.23
HSH49YOR319W YMR082CQ04276 118 aa1.14□□□□□ -2.23
HSH49YOR319W TY1B-BRQ12193 1756 aa1.13□□□□□ -2.23
HSH49YOR319W ESC1Q03661 1658 aaKnown RBP1.13□□□□□ -2.23
HSH49YOR319W NHP2P32495 156 aaPredicted RBP1.13□□□□□ -2.23
HSH49YOR319W BSC4P53841 131 aa1.13□□□□□ -2.23
HSH49YOR319W YGL194C-AQ2V2P6 80 aa1.11□□□□□ -2.23
HSH49YOR319W RPS29BP41058 56 aaKnown RBP1.1□□□□□ -2.23
HSH49YOR319W SCP1Q08873 200 aa1.1□□□□□ -2.23
HSH49YOR319W YNL042W-BQ3E7Z2 85 aa1.1□□□□□ -2.23
HSH49YOR319W DNF3Q12674 1656 aa1.1□□□□□ -2.23
HSH49YOR319W PDX3P38075 228 aaKnown RBP1.09□□□□□ -2.23
HSH49YOR319W LTE1P07866 1435 aa1.08□□□□□ -2.24
HSH49YOR319W Q0032Q9ZZX7 96 aa1.08□□□□□ -2.24
HSH49YOR319W RPC10P40422 70 aa1.07□□□□□ -2.24
HSH49YOR319W COX7P10174 60 aa1.06□□□□□ -2.24
HSH49YOR319W RPL38P49167 78 aaKnown RBP1.06□□□□□ -2.24
HSH49YOR319W YNL190WP53872 204 aa1.06□□□□□ -2.24
HSH49YOR319W ECM29P38737 1868 aa1.05□□□□□ -2.24
HSH49YOR319W YNL198CP40166 100 aa1.05□□□□□ -2.24
HSH49YOR319W TY1B-PR2P0C2J0 1756 aa1.04□□□□□ -2.24
HSH49YOR319W YBR201C-AQ2V2Q3 67 aa1.04□□□□□ -2.24
HSH49YOR319W TY1B-DR6P0C2I3 1755 aa1.03□□□□□ -2.24
HSH49YOR319W TY1B-LR2P0C2I5 1755 aa1.03□□□□□ -2.24
HSH49YOR319W TY1B-PR3P0C2J1 1755 aaKnown RBP1.03□□□□□ -2.24
HSH49YOR319W TY1B-JR2P47100 1755 aaKnown RBP1.03□□□□□ -2.24
HSH49YOR319W TY1B-MR1Q04214 1755 aa1.03□□□□□ -2.24
HSH49YOR319W TY1B-MR2Q04670 1755 aaKnown RBP1.03□□□□□ -2.24
HSH49YOR319W TY1B-NL1Q12112 1755 aa1.03□□□□□ -2.24
HSH49YOR319W TY1B-GR1Q12141 1755 aa1.03□□□□□ -2.24
HSH49YOR319W TY1B-GR3Q12316 1755 aa1.03□□□□□ -2.24
HSH49YOR319W TY1B-PLQ12414 1755 aaKnown RBP1.03□□□□□ -2.24
HSH49YOR319W TY1B-ORQ92393 1755 aa1.03□□□□□ -2.24
HSH49YOR319W YHR214C-DP0CX93 97 aa1.03□□□□□ -2.24
HSH49YOR319W MOT1P32333 1867 aa1.03□□□□□ -2.25
HSH49YOR319W FPR2P32472 135 aa1.02□□□□□ -2.25
HSH49YOR319W YMR175W-AQ3E766 64 aa1.02□□□□□ -2.25
HSH49YOR319W YSP2Q06681 1438 aa1.01□□□□□ -2.25
HSH49YOR319W YJR107C-AP0CT86 78 aa1.01□□□□□ -2.25
HSH49YOR319W TOM6P33448 61 aa1□□□□□ -2.25
HSH49YOR319W PAU23Q07987 124 aa1□□□□□ -2.25
HSH49YOR319W PAU17Q12370 124 aa1□□□□□ -2.25
HSH49YOR319W YOR343CQ12484 108 aa1□□□□□ -2.25
HSH49YOR319W TY1B-LR3P0C2I6 1755 aaKnown RBP1□□□□□ -2.25
HSH49YOR319W YAL065CO13511 128 aa0.99□□□□□ -2.25
HSH49YOR319W YMR122W-AQ3E842 84 aa0.99□□□□□ -2.25
HSH49YOR319W ATP18P81450 59 aa0.97□□□□□ -2.25
HSH49YOR319W CWP2P43497 92 aa0.96□□□□□ -2.26
HSH49YOR319W MLP1Q02455 1875 aaKnown RBP0.95□□□□□ -2.26
HSH49YOR319W UTP10P42945 1769 aaKnown RBP0.95□□□□□ -2.26
HSH49YOR319W STT4P37297 1900 aa0.95□□□□□ -2.26
HSH49YOR319W YKL068W-AQ3E826 78 aa0.94□□□□□ -2.26
HSH49YOR319W ATX1P38636 73 aa0.93□□□□□ -2.26
HSH49YOR319W SDH6Q3E785 79 aa0.93□□□□□ -2.26
HSH49YOR319W NOP10Q6Q547 58 aaPredicted RBP0.93□□□□□ -2.26
HSH49YOR319W HKR1P41809 1802 aa0.93□□□□□ -2.26
HSH49YOR319W YFR009W-AP0C5M9 85 aa0.92□□□□□ -2.26
HSH49YOR319W YCR085WP25650 117 aa0.92□□□□□ -2.26
HSH49YOR319W YOR105WQ08504 108 aa0.92□□□□□ -2.26
HSH49YOR319W XRN1P22147 1528 aaKnown RBP0.92□□□□□ -2.26
HSH49YOR319W TY1B-DR5P0C2I2 1755 aa0.92□□□□□ -2.26
HSH49YOR319W TY1B-PR1P0C2I9 1755 aaKnown RBP0.92□□□□□ -2.26
HSH49YOR319W TY1B-JR1P47098 1755 aa0.92□□□□□ -2.26
HSH49YOR319W TY1B-ML2Q03434 1755 aaKnown RBP0.92□□□□□ -2.26
HSH49YOR319W TY1B-ER1Q03612 1755 aa0.92□□□□□ -2.26
HSH49YOR319W TY1B-ER2Q03619 1755 aa0.92□□□□□ -2.26
HSH49YOR319W TY1B-DR1Q03855 1755 aa0.92□□□□□ -2.26
HSH49YOR319W TY1B-ML1Q04711 1755 aaKnown RBP0.92□□□□□ -2.26
HSH49YOR319W TY1B-LR1Q12088 1755 aaKnown RBP0.92□□□□□ -2.26
HSH49YOR319W TY1B-GR2Q12269 1755 aa0.92□□□□□ -2.26
HSH49YOR319W TY1B-OLQ12273 1755 aa0.92□□□□□ -2.26
HSH49YOR319W TY1B-DR3Q99231 1755 aa0.92□□□□□ -2.26
HSH49YOR319W ESP1Q03018 1630 aa0.91□□□□□ -2.26
HSH49YOR319W POC4Q12245 148 aaPredicted RBP0.91□□□□□ -2.26
HSH49YOR319W MMS22Q06164 1454 aa0.89□□□□□ -2.27
HSH49YOR319W YBR016WP38216 128 aa0.89□□□□□ -2.27
HSH49YOR319W YIL156W-BQ2V2P4 73 aa0.89□□□□□ -2.27
HSH49YOR319W YIL134C-AQ45U18 67 aa0.89□□□□□ -2.27
HSH49YOR319W YPR145C-AQ2V2P0 78 aa0.88□□□□□ -2.27
HSH49YOR319W YKL065W-AQ2V2P2 73 aa0.88□□□□□ -2.27
HSH49YOR319W TAO3P40468 2376 aa0.88□□□□□ -2.27
HSH49YOR319W SGF11Q03067 99 aa0.87□□□□□ -2.27
HSH49YOR319W YOL097W-AQ3E7Y9 61 aa0.86□□□□□ -2.27
HSH49YOR319W YOR314WQ12506 109 aa0.85□□□□□ -2.27
HSH49YOR319W YPR108W-AQ3E7B3 70 aa0.84□□□□□ -2.27
HSH49YOR319W YDR381C-AQ3E6R5 114 aa0.83□□□□□ -2.28
HSH49YOR319W PMD1P32634 1753 aa0.81□□□□□ -2.28
HSH49YOR319W SIN3P22579 1536 aa0.81□□□□□ -2.28
HSH49YOR319W BPH1P25356 2167 aa0.81□□□□□ -2.28
HSH49YOR319W YBR032WP38223 100 aa0.79□□□□□ -2.28
HSH49YOR319W APC1P53886 1748 aa0.78□□□□□ -2.28
HSH49YOR319W TY2B-CP25384 1770 aa0.78□□□□□ -2.28
HSH49YOR319W TY2B-DR1Q12472 1770 aa0.78□□□□□ -2.28
HSH49YOR319W EDC1P53080 175 aaPredicted RBP0.78□□□□□ -2.28
HSH49YOR319W SWM2P40342 146 aa0.76□□□□□ -2.29
HSH49YOR319W YDL022C-AP0C5L6 82 aa0.75□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms