RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C SEC7P11075 2009 aaKnown RBP0.33□□□□□ -2.36
SWT1YOR166C TY4B-HP0C2J7 1802 aa0.32□□□□□ -2.36
SWT1YOR166C ESP1Q03018 1630 aa0.32□□□□□ -2.36
SWT1YOR166C DNF3Q12674 1656 aa0.32□□□□□ -2.36
SWT1YOR166C RPA12P32529 125 aaKnown RBP0.32□□□□□ -2.36
SWT1YOR166C LAA1P39526 2014 aa0.32□□□□□ -2.36
SWT1YOR166C CWP2P43497 92 aa0.32□□□□□ -2.36
SWT1YOR166C POC4Q12245 148 aaPredicted RBP0.32□□□□□ -2.36
SWT1YOR166C YOR343CQ12484 108 aa0.32□□□□□ -2.36
SWT1YOR166C YNL042W-BQ3E7Z2 85 aa0.32□□□□□ -2.36
SWT1YOR166C MYO1P08964 1928 aa0.31□□□□□ -2.36
SWT1YOR166C XRN1P22147 1528 aaKnown RBP0.31□□□□□ -2.36
SWT1YOR166C YHR214C-DP0CX93 97 aa0.31□□□□□ -2.36
SWT1YOR166C COX7P10174 60 aa0.31□□□□□ -2.36
SWT1YOR166C YCR085WP25650 117 aa0.31□□□□□ -2.36
SWT1YOR166C FPR2P32472 135 aa0.31□□□□□ -2.36
SWT1YOR166C PDX3P38075 228 aaKnown RBP0.31□□□□□ -2.36
SWT1YOR166C Q0032Q9ZZX7 96 aa0.31□□□□□ -2.36
SWT1YOR166C MMS22Q06164 1454 aa0.3□□□□□ -2.36
SWT1YOR166C YRF1-2P40105 1681 aa0.3□□□□□ -2.36
SWT1YOR166C RIM15P43565 1770 aa0.3□□□□□ -2.36
SWT1YOR166C TY1B-BLQ12490 1755 aa0.3□□□□□ -2.36
SWT1YOR166C BRR2P32639 2163 aaKnown RBP0.3□□□□□ -2.36
SWT1YOR166C YAL065CO13511 128 aa0.3□□□□□ -2.36
SWT1YOR166C TOM6P33448 61 aa0.3□□□□□ -2.36
SWT1YOR166C RPC10P40422 70 aa0.3□□□□□ -2.36
SWT1YOR166C RPL38P49167 78 aaKnown RBP0.3□□□□□ -2.36
SWT1YOR166C YNL190WP53872 204 aa0.3□□□□□ -2.36
SWT1YOR166C PAU23Q07987 124 aa0.3□□□□□ -2.36
SWT1YOR166C PAU17Q12370 124 aa0.3□□□□□ -2.36
SWT1YOR166C YKL065W-AQ2V2P2 73 aa0.3□□□□□ -2.36
SWT1YOR166C YBR201C-AQ2V2Q3 67 aa0.3□□□□□ -2.36
SWT1YOR166C YOL164W-AQ3E7A5 60 aa0.3□□□□□ -2.36
SWT1YOR166C YKL068W-AQ3E826 78 aa0.3□□□□□ -2.36
SWT1YOR166C YMR122W-AQ3E842 84 aa0.3□□□□□ -2.36
SWT1YOR166C TY1B-BRQ12193 1756 aa0.29□□□□□ -2.36
SWT1YOR166C ATP18P81450 59 aa0.29□□□□□ -2.36
SWT1YOR166C YOR105WQ08504 108 aa0.29□□□□□ -2.36
SWT1YOR166C YOR314WQ12506 109 aa0.29□□□□□ -2.36
SWT1YOR166C YPR145C-AQ2V2P0 78 aa0.29□□□□□ -2.36
SWT1YOR166C YDR381C-AQ3E6R5 114 aa0.29□□□□□ -2.36
SWT1YOR166C NOP10Q6Q547 58 aaPredicted RBP0.29□□□□□ -2.36
SWT1YOR166C URA2P07259 2214 aaKnown RBP0.29□□□□□ -2.36
SWT1YOR166C POL2P21951 2222 aaKnown RBP0.28□□□□□ -2.36
SWT1YOR166C SNF2P22082 1703 aa0.28□□□□□ -2.36
SWT1YOR166C YNL198CP40166 100 aa0.28□□□□□ -2.36
SWT1YOR166C YIL156W-BQ2V2P4 73 aa0.28□□□□□ -2.36
SWT1YOR166C TY1B-NL2Q99337 1749 aaKnown RBP0.27□□□□□ -2.37
SWT1YOR166C TY1B-DR6P0C2I3 1755 aa0.27□□□□□ -2.37
SWT1YOR166C TY1B-LR2P0C2I5 1755 aa0.27□□□□□ -2.37
SWT1YOR166C TY1B-PR2P0C2J0 1756 aa0.27□□□□□ -2.37
SWT1YOR166C TY1B-PR3P0C2J1 1755 aaKnown RBP0.27□□□□□ -2.37
SWT1YOR166C TY1B-JR2P47100 1755 aaKnown RBP0.27□□□□□ -2.37
SWT1YOR166C TY1B-MR1Q04214 1755 aa0.27□□□□□ -2.37
SWT1YOR166C TY1B-MR2Q04670 1755 aaKnown RBP0.27□□□□□ -2.37
SWT1YOR166C TY1B-NL1Q12112 1755 aa0.27□□□□□ -2.37
SWT1YOR166C TY1B-GR1Q12141 1755 aa0.27□□□□□ -2.37
SWT1YOR166C TY1B-GR3Q12316 1755 aa0.27□□□□□ -2.37
SWT1YOR166C TY1B-PLQ12414 1755 aaKnown RBP0.27□□□□□ -2.37
SWT1YOR166C TY1B-ORQ92393 1755 aa0.27□□□□□ -2.37
SWT1YOR166C NUP159P40477 1460 aa0.27□□□□□ -2.37
SWT1YOR166C SIN3P22579 1536 aa0.27□□□□□ -2.37
SWT1YOR166C YJR107C-AP0CT86 78 aa0.27□□□□□ -2.37
SWT1YOR166C SWM2P40342 146 aa0.27□□□□□ -2.37
SWT1YOR166C SGF11Q03067 99 aa0.27□□□□□ -2.37
SWT1YOR166C YDR119W-AQ2V2P9 66 aa0.27□□□□□ -2.37
SWT1YOR166C SDH6Q3E785 79 aa0.27□□□□□ -2.37
SWT1YOR166C YOL097W-AQ3E7Y9 61 aa0.27□□□□□ -2.37
SWT1YOR166C YGR121W-AQ3E816 71 aa0.27□□□□□ -2.37
SWT1YOR166C YHR213W-AQ8TGT4 77 aa0.27□□□□□ -2.37
SWT1YOR166C TY1B-LR3P0C2I6 1755 aaKnown RBP0.27□□□□□ -2.37
SWT1YOR166C ECM29P38737 1868 aa0.26□□□□□ -2.37
SWT1YOR166C DOP1Q03921 1698 aa0.26□□□□□ -2.37
SWT1YOR166C TY1B-DR5P0C2I2 1755 aa0.26□□□□□ -2.37
SWT1YOR166C TY1B-PR1P0C2I9 1755 aaKnown RBP0.26□□□□□ -2.37
SWT1YOR166C UTP10P42945 1769 aaKnown RBP0.26□□□□□ -2.37
SWT1YOR166C TY1B-ER2Q03619 1755 aa0.26□□□□□ -2.37
SWT1YOR166C TY1B-DR1Q03855 1755 aa0.26□□□□□ -2.37
SWT1YOR166C TY1B-ML1Q04711 1755 aaKnown RBP0.26□□□□□ -2.37
SWT1YOR166C TY1B-LR1Q12088 1755 aaKnown RBP0.26□□□□□ -2.37
SWT1YOR166C TY1B-GR2Q12269 1755 aa0.26□□□□□ -2.37
SWT1YOR166C TY1B-DR3Q99231 1755 aa0.26□□□□□ -2.37
SWT1YOR166C YDL022C-AP0C5L6 82 aa0.26□□□□□ -2.37
SWT1YOR166C QCR9P22289 66 aa0.26□□□□□ -2.37
SWT1YOR166C MOT1P32333 1867 aa0.26□□□□□ -2.37
SWT1YOR166C MLP1Q02455 1875 aaKnown RBP0.26□□□□□ -2.37
SWT1YOR166C TY2B-CP25384 1770 aa0.25□□□□□ -2.37
SWT1YOR166C TY2B-DR1Q12472 1770 aa0.25□□□□□ -2.37
SWT1YOR166C LSM2P38203 95 aaKnown RBP0.25□□□□□ -2.37
SWT1YOR166C YBR016WP38216 128 aa0.25□□□□□ -2.37
SWT1YOR166C EDC1P53080 175 aaPredicted RBP0.25□□□□□ -2.37
SWT1YOR166C YPR108W-AQ3E7B3 70 aa0.25□□□□□ -2.37
SWT1YOR166C YGR035W-AQ45U48 73 aa0.25□□□□□ -2.37
SWT1YOR166C TY1B-JR1P47098 1755 aa0.25□□□□□ -2.37
SWT1YOR166C TY1B-ML2Q03434 1755 aaKnown RBP0.25□□□□□ -2.37
SWT1YOR166C TY1B-ER1Q03612 1755 aa0.25□□□□□ -2.37
SWT1YOR166C TY1B-OLQ12273 1755 aa0.25□□□□□ -2.37
SWT1YOR166C HKR1P41809 1802 aa0.25□□□□□ -2.37
SWT1YOR166C YFR009W-AP0C5M9 85 aa0.24□□□□□ -2.37
SWT1YOR166C TIM12P32830 109 aa0.24□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms