RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C YNR034W-AQ3E841 98 aa0.88□□□□□ -2.27
RPB11YOL005C RPL33AP05744 107 aaKnown RBP0.87□□□□□ -2.27
RPB11YOL005C RPS22AP0C0W1 130 aaKnown RBP0.87□□□□□ -2.27
RPB11YOL005C SEC59P20048 519 aa0.87□□□□□ -2.27
RPB11YOL005C PRE1P22141 198 aaKnown RBP0.87□□□□□ -2.27
RPB11YOL005C YHL042WP38729 150 aa0.87□□□□□ -2.27
RPB11YOL005C SRP14P38985 146 aa0.87□□□□□ -2.27
RPB11YOL005C VMA7P39111 118 aa0.87□□□□□ -2.27
RPB11YOL005C SPC25P40014 221 aa0.87□□□□□ -2.27
RPB11YOL005C CYB5P40312 120 aa0.87□□□□□ -2.27
RPB11YOL005C BRP1P53194 125 aa0.87□□□□□ -2.27
RPB11YOL005C GPI19Q04082 140 aa0.87□□□□□ -2.27
RPB11YOL005C GIM5Q04493 163 aa0.87□□□□□ -2.27
RPB11YOL005C YDR029WQ12111 104 aa0.87□□□□□ -2.27
RPB11YOL005C ATP14Q12349 124 aa0.87□□□□□ -2.27
RPB11YOL005C VMA9Q3E7B6 73 aa0.87□□□□□ -2.27
RPB11YOL005C YLR307C-AQ3E825 87 aa0.87□□□□□ -2.27
RPB11YOL005C UBC5P15732 148 aa0.86□□□□□ -2.27
RPB11YOL005C SRB6P32570 121 aa0.86□□□□□ -2.27
RPB11YOL005C SEC72P39742 193 aaKnown RBP0.86□□□□□ -2.27
RPB11YOL005C YEL008WP40001 126 aa0.86□□□□□ -2.27
RPB11YOL005C CIN5P40917 295 aa0.86□□□□□ -2.27
RPB11YOL005C VMA21P41806 77 aa0.86□□□□□ -2.27
RPB11YOL005C CWP2P43497 92 aa0.86□□□□□ -2.27
RPB11YOL005C YFL065CP43539 102 aa0.86□□□□□ -2.27
RPB11YOL005C YFL019CP43576 117 aa0.86□□□□□ -2.27
RPB11YOL005C YGL149WP53116 101 aa0.86□□□□□ -2.27
RPB11YOL005C YDR010CQ12426 110 aa0.86□□□□□ -2.27
RPB11YOL005C HMRA2P0CY13 119 aa0.85□□□□□ -2.27
RPB11YOL005C SRP21P32342 167 aa0.85□□□□□ -2.27
RPB11YOL005C ACP1P32463 125 aa0.85□□□□□ -2.27
RPB11YOL005C HSP10P38910 106 aa0.85□□□□□ -2.27
RPB11YOL005C PAU7P39545 55 aa0.85□□□□□ -2.27
RPB11YOL005C NSE4P43124 402 aa0.85□□□□□ -2.27
RPB11YOL005C PAU5P43575 122 aa0.85□□□□□ -2.27
RPB11YOL005C ATP19P81451 68 aa0.85□□□□□ -2.27
RPB11YOL005C YIL014C-AQ02598 104 aa0.85□□□□□ -2.27
RPB11YOL005C LCL1Q02786 101 aa0.85□□□□□ -2.27
RPB11YOL005C FYV12Q08559 129 aa0.85□□□□□ -2.27
RPB11YOL005C YMR122W-AQ3E842 84 aa0.85□□□□□ -2.27
RPB11YOL005C SCS22Q6Q595 175 aa0.85□□□□□ -2.27
RPB11YOL005C YPR010C-AA5Z2X5 72 aa0.84□□□□□ -2.27
RPB11YOL005C HYP2P23301 157 aaKnown RBP0.84□□□□□ -2.27
RPB11YOL005C YKR070WP36151 352 aaKnown RBP0.84□□□□□ -2.27
RPB11YOL005C ATG8P38182 117 aaRIP-Chip data0.84□□□□□ -2.27not detected
RPB11YOL005C YBR013CP38215 129 aa0.84□□□□□ -2.27
RPB11YOL005C PHS1P40857 217 aa0.84□□□□□ -2.27
RPB11YOL005C MOG1P47123 218 aa0.84□□□□□ -2.27
RPB11YOL005C ERI1P62651 68 aaKnown RBP0.84□□□□□ -2.27
RPB11YOL005C APS2Q00381 147 aa0.84□□□□□ -2.27
RPB11YOL005C PKR1Q03880 122 aaKnown RBP0.84□□□□□ -2.27
RPB11YOL005C YDL085C-AQ3E7B7 68 aaKnown RBP0.84□□□□□ -2.27
RPB11YOL005C YOR008C-AQ3E7B9 74 aa0.84□□□□□ -2.27
RPB11YOL005C KTI11Q3E840 82 aa0.84□□□□□ -2.27
RPB11YOL005C Q0032Q9ZZX7 96 aa0.84□□□□□ -2.27
RPB11YOL005C PFY1P07274 126 aa0.83□□□□□ -2.28
RPB11YOL005C HMRA1P0CY11 126 aa0.83□□□□□ -2.28
RPB11YOL005C NHP6AP11632 93 aaKnown RBP0.83□□□□□ -2.28
RPB11YOL005C RPC10P40422 70 aa0.83□□□□□ -2.28
RPB11YOL005C AIM19P40502 157 aa0.83□□□□□ -2.28
RPB11YOL005C ARL3Q02804 198 aa0.83□□□□□ -2.28
RPB11YOL005C YLR194CQ05777 254 aa0.83□□□□□ -2.28
RPB11YOL005C SHH4Q06236 168 aa0.83□□□□□ -2.28
RPB11YOL005C YPL261CQ08976 102 aa0.83□□□□□ -2.28
RPB11YOL005C YLR118CQ12354 227 aa0.83□□□□□ -2.28
RPB11YOL005C CMC2Q3E7A4 109 aa0.83□□□□□ -2.28
RPB11YOL005C ENV10Q99382 181 aa0.83□□□□□ -2.28
RPB11YOL005C ECM12O13529 151 aa0.82□□□□□ -2.28
RPB11YOL005C PAU19P0CE85 124 aa0.82□□□□□ -2.28
RPB11YOL005C PAU21P0CE86 164 aa0.82□□□□□ -2.28
RPB11YOL005C PAU22P0CE87 164 aa0.82□□□□□ -2.28
RPB11YOL005C PAU3P25610 124 aa0.82□□□□□ -2.28
RPB11YOL005C MRP49P32388 137 aa0.82□□□□□ -2.28
RPB11YOL005C GSP1P32835 219 aaKnown RBP0.82□□□□□ -2.28
RPB11YOL005C PAU16P35994 123 aa0.82□□□□□ -2.28
RPB11YOL005C FYV4P38783 130 aaPredicted RBP0.82□□□□□ -2.28
RPB11YOL005C PAU15P40585 124 aa0.82□□□□□ -2.28
RPB11YOL005C RPL37BP51402 88 aaKnown RBP0.82□□□□□ -2.28
RPB11YOL005C ERV14P53173 138 aa0.82□□□□□ -2.28
RPB11YOL005C HHO1P53551 258 aa0.82□□□□□ -2.28
RPB11YOL005C YNL190WP53872 204 aa0.82□□□□□ -2.28
RPB11YOL005C AIM11P87275 137 aa0.82□□□□□ -2.28
RPB11YOL005C YAL065CO13511 128 aa0.81□□□□□ -2.28
RPB11YOL005C YDL022C-AP0C5L6 82 aa0.81□□□□□ -2.28
RPB11YOL005C UBC4P15731 148 aa0.81□□□□□ -2.28
RPB11YOL005C SHU1P38751 150 aa0.81□□□□□ -2.28
RPB11YOL005C MVB12P42939 101 aa0.81□□□□□ -2.28
RPB11YOL005C YML079WQ03629 201 aa0.81□□□□□ -2.28
RPB11YOL005C YMR103CQ04436 120 aa0.81□□□□□ -2.28
RPB11YOL005C SEN15Q04675 128 aa0.81□□□□□ -2.28
RPB11YOL005C ZEO1Q08245 113 aa0.81□□□□□ -2.28
RPB11YOL005C YLR412C-AQ3E742 68 aa0.81□□□□□ -2.28
RPB11YOL005C YGL041C-BQ3E750 60 aa0.81□□□□□ -2.28
RPB11YOL005C COA3Q3E7B2 85 aa0.81□□□□□ -2.28
RPB11YOL005C RPS22BQ3E7Y3 130 aaKnown RBP0.81□□□□□ -2.28
RPB11YOL005C YLL006W-AQ3E814 58 aa0.81□□□□□ -2.28
RPB11YOL005C YBL039W-BP0C268 59 aa0.8□□□□□ -2.28
RPB11YOL005C TOS6P48560 102 aa0.8□□□□□ -2.28
RPB11YOL005C BSC4P53841 131 aa0.8□□□□□ -2.28
RPB11YOL005C MGR2Q02889 113 aa0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms