RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C YOL014WQ08110 124 aa2.81□□□□□ -1.96
CIT1YNR001C PHO85P17157 305 aa2.8□□□□□ -1.96
CIT1YNR001C YRA2P36036 203 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
CIT1YNR001C YHR125WP38831 101 aa2.8□□□□□ -1.96
CIT1YNR001C FIP1P45976 327 aa2.8□□□□□ -1.96
CIT1YNR001C SIP18P50263 79 aa2.8□□□□□ -1.96
CIT1YNR001C SBH1P52870 82 aa2.8□□□□□ -1.96
CIT1YNR001C YHP1Q04116 353 aa2.8□□□□□ -1.96
CIT1YNR001C YOL085CQ99345 113 aa2.8□□□□□ -1.96
CIT1YNR001C QCR8P08525 94 aa2.79□□□□□ -1.96
CIT1YNR001C RPS23AP0CX29 145 aaKnown RBP2.79□□□□□ -1.96
CIT1YNR001C RPS23BP0CX30 145 aa2.79□□□□□ -1.96
CIT1YNR001C SPI1P40092 148 aa2.79□□□□□ -1.96
CIT1YNR001C ECO1P43605 281 aa2.79□□□□□ -1.96
CIT1YNR001C SMD1Q02260 146 aaPredicted RBP2.79□□□□□ -1.96
CIT1YNR001C YOL118CQ08259 102 aa2.79□□□□□ -1.96
CIT1YNR001C YDR029WQ12111 104 aa2.79□□□□□ -1.96
CIT1YNR001C FZF1P32805 299 aa2.78□□□□□ -1.96
CIT1YNR001C YHR022CP38763 256 aa2.78□□□□□ -1.96
CIT1YNR001C CWP2P43497 92 aa2.78□□□□□ -1.96
CIT1YNR001C DCV1P43595 202 aa2.78□□□□□ -1.96
CIT1YNR001C YLR412C-AQ3E742 68 aa2.78□□□□□ -1.96
CIT1YNR001C POR2P40478 281 aa2.77□□□□□ -1.97
CIT1YNR001C AIM19P40502 157 aa2.77□□□□□ -1.97
CIT1YNR001C YFL051CP43552 160 aa2.77□□□□□ -1.97
CIT1YNR001C KNH1P50112 268 aa2.77□□□□□ -1.97
CIT1YNR001C YPL038W-AQ3E7B4 63 aa2.77□□□□□ -1.97
CIT1YNR001C CDC39P25655 2108 aaKnown RBP2.77□□□□□ -1.97
CIT1YNR001C YSY6P38374 65 aa2.76□□□□□ -1.97
CIT1YNR001C YAR029WP39549 74 aa2.76□□□□□ -1.97
CIT1YNR001C YER084WP40057 128 aa2.76□□□□□ -1.97
CIT1YNR001C HUR1P45820 110 aa2.76□□□□□ -1.97
CIT1YNR001C YDR274CP87283 123 aa2.76□□□□□ -1.97
CIT1YNR001C HAL1Q01766 294 aa2.76□□□□□ -1.97
CIT1YNR001C ATP15P21306 62 aa2.76□□□□□ -1.97
CIT1YNR001C YEL045CP32616 141 aa2.76□□□□□ -1.97
CIT1YNR001C DSE2P38844 325 aa2.76□□□□□ -1.97
CIT1YNR001C CIS3P47001 227 aa2.76□□□□□ -1.97
CIT1YNR001C YMR320WQ04897 101 aa2.76□□□□□ -1.97
CIT1YNR001C COA3Q3E7B2 85 aa2.76□□□□□ -1.97
CIT1YNR001C CYR1P08678 2026 aaKnown RBP2.75□□□□□ -1.97
CIT1YNR001C YHR032W-AP0C5N6 59 aa2.75□□□□□ -1.97
CIT1YNR001C YKR032WP36127 104 aa2.75□□□□□ -1.97
CIT1YNR001C MPC2P38857 129 aa2.75□□□□□ -1.97
CIT1YNR001C PIR5P46999 287 aa2.75□□□□□ -1.97
CIT1YNR001C YGL193CP53097 103 aa2.75□□□□□ -1.97
CIT1YNR001C YGR219WP53307 113 aa2.75□□□□□ -1.97
CIT1YNR001C BLM10P43583 2143 aa2.74□□□□□ -1.97
CIT1YNR001C UBC5P15732 148 aa2.74□□□□□ -1.97
CIT1YNR001C MID2P36027 376 aa2.74□□□□□ -1.97
CIT1YNR001C YFL019CP43576 117 aa2.74□□□□□ -1.97
CIT1YNR001C VPS55P47111 140 aa2.74□□□□□ -1.97
CIT1YNR001C IRC23Q08416 157 aa2.74□□□□□ -1.97
CIT1YNR001C YAR023CD6VPM8 179 aa2.73□□□□□ -1.97
CIT1YNR001C YCL042WP25572 119 aa2.73□□□□□ -1.97
CIT1YNR001C YMR141CP40211 102 aa2.73□□□□□ -1.97
CIT1YNR001C IMP2P46972 177 aa2.73□□□□□ -1.97
CIT1YNR001C YMR295CQ03559 197 aa2.73□□□□□ -1.97
CIT1YNR001C MRPS8Q03799 155 aa2.73□□□□□ -1.97
CIT1YNR001C POL2P21951 2222 aaKnown RBP2.72□□□□□ -1.97
CIT1YNR001C BRR2P32639 2163 aaKnown RBP2.72□□□□□ -1.97
CIT1YNR001C YHR213WP0CI67 198 aa2.72□□□□□ -1.97
CIT1YNR001C MRPL38P35996 138 aaPredicted RBP2.72□□□□□ -1.97
CIT1YNR001C YHL018WP38744 120 aaPredicted RBP2.72□□□□□ -1.97
CIT1YNR001C SHU1P38751 150 aa2.72□□□□□ -1.97
CIT1YNR001C VTC1P40046 129 aaRIP-Chip data2.72□□□□□ -1.97not detected
CIT1YNR001C HUA1P40325 198 aa2.72□□□□□ -1.97
CIT1YNR001C RSM19P53733 91 aaPredicted RBP2.72□□□□□ -1.97
CIT1YNR001C YNR077CP53758 84 aa2.72□□□□□ -1.97
CIT1YNR001C TMC1Q08422 150 aaPredicted RBP2.72□□□□□ -1.97
CIT1YNR001C YDR119W-AQ2V2P9 66 aa2.72□□□□□ -1.97
CIT1YNR001C YCR050CP25630 102 aa2.71□□□□□ -1.98
CIT1YNR001C UTH1P36135 365 aa2.71□□□□□ -1.98
CIT1YNR001C CTR2P38865 189 aa2.71□□□□□ -1.98
CIT1YNR001C YDR381C-AQ3E6R5 114 aa2.71□□□□□ -1.98
CIT1YNR001C YER039C-AP0CD97 72 aa2.7□□□□□ -1.98
CIT1YNR001C YGR164WP53291 111 aa2.7□□□□□ -1.98
CIT1YNR001C PMP3P87284 55 aa2.7□□□□□ -1.98
CIT1YNR001C YLR042CQ07990 161 aa2.7□□□□□ -1.98
CIT1YNR001C FAS1P07149 2051 aaKnown RBP2.7□□□□□ -1.98
CIT1YNR001C YJR107C-AP0CT86 78 aa2.69□□□□□ -1.98
CIT1YNR001C SVP26P38869 228 aa2.69□□□□□ -1.98
CIT1YNR001C TDA2P40045 126 aa2.69□□□□□ -1.98
CIT1YNR001C YER135CP40082 130 aa2.69□□□□□ -1.98
CIT1YNR001C RGM1Q00453 211 aa2.69□□□□□ -1.98
CIT1YNR001C YDR114CQ04597 100 aa2.69□□□□□ -1.98
CIT1YNR001C CCW12Q12127 133 aa2.69□□□□□ -1.98
CIT1YNR001C YLR285C-AQ3E771 56 aa2.69□□□□□ -1.98
CIT1YNR001C YNL277W-AQ3E7Z0 62 aa2.69□□□□□ -1.98
CIT1YNR001C RPL26AP05743 127 aaKnown RBP2.68□□□□□ -1.98
CIT1YNR001C YER187WP40102 141 aa2.68□□□□□ -1.98
CIT1YNR001C RPL26BP53221 127 aaKnown RBP2.68□□□□□ -1.98
CIT1YNR001C IRC21Q04772 201 aa2.68□□□□□ -1.98
CIT1YNR001C FYV12Q08559 129 aa2.68□□□□□ -1.98
CIT1YNR001C YOR314WQ12506 109 aa2.68□□□□□ -1.98
CIT1YNR001C RPL39P04650 51 aa2.68□□□□□ -1.98
CIT1YNR001C YBR209WP38311 105 aa2.68□□□□□ -1.98
CIT1YNR001C SFT1P43682 97 aa2.68□□□□□ -1.98
CIT1YNR001C YJL027CP47063 138 aaPredicted RBP2.68□□□□□ -1.98
CIT1YNR001C YJR146WP47174 117 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms