RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	AGA1	P32323	725 aa		3.17	□□□□□ -1.9
ATG2	YNL242W	COA3	Q3E7B2	85 aa		3.17	□□□□□ -1.9
ATG2	YNL242W	YKL183C-A	Q3E765	70 aa		3.17	□□□□□ -1.9
ATG2	YNL242W	YHR213W	P0CI67	198 aa		3.17	□□□□□ -1.9
ATG2	YNL242W	YBR144C	P34215	104 aa		3.17	□□□□□ -1.9
ATG2	YNL242W	YAR029W	P39549	74 aa		3.17	□□□□□ -1.9
ATG2	YNL242W	HUR1	P45820	110 aa		3.17	□□□□□ -1.9
ATG2	YNL242W	RPS28B	P0C0X0	67 aa	Known RBP	3.16	□□□□□ -1.9
ATG2	YNL242W	YNL194C	P40169	301 aa		3.16	□□□□□ -1.9
ATG2	YNL242W	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.16	□□□□□ -1.9
ATG2	YNL242W	YLR342W-A	Q3E810	57 aa		3.16	□□□□□ -1.9
ATG2	YNL242W	YBR126W-A	Q8TGU7	68 aa		3.16	□□□□□ -1.9
ATG2	YNL242W	MGR2	Q02889	113 aa		3.16	□□□□□ -1.9
ATG2	YNL242W	RPL42A	P0CX27	106 aa	Known RBP	3.16	□□□□□ -1.9
ATG2	YNL242W	RPL42B	P0CX28	106 aa	Known RBP	3.16	□□□□□ -1.9
ATG2	YNL242W	YMR105W-A	Q8TGS8	64 aa		3.16	□□□□□ -1.9
ATG2	YNL242W	GAT3	Q07928	141 aa		3.15	□□□□□ -1.9
ATG2	YNL242W	SED1	Q01589	338 aa		3.15	□□□□□ -1.91
ATG2	YNL242W	YLR285C-A	Q3E771	56 aa		3.15	□□□□□ -1.91
ATG2	YNL242W	YOL085C	Q99345	113 aa		3.15	□□□□□ -1.91
ATG2	YNL242W	TOM6	P33448	61 aa		3.15	□□□□□ -1.91
ATG2	YNL242W	YSY6	P38374	65 aa		3.15	□□□□□ -1.91
ATG2	YNL242W	TOS6	P48560	102 aa		3.15	□□□□□ -1.91
ATG2	YNL242W	YNL046W	P53956	172 aa		3.15	□□□□□ -1.91
ATG2	YNL242W	SPG4	Q04438	115 aa		3.15	□□□□□ -1.91
ATG2	YNL242W	YKR045C	P36138	183 aa		3.14	□□□□□ -1.91
ATG2	YNL242W	PEX22	P39718	180 aa		3.14	□□□□□ -1.91
ATG2	YNL242W	YOL160W	Q08321	113 aa		3.14	□□□□□ -1.91
ATG2	YNL242W	YPL038W-A	Q3E7B4	63 aa		3.14	□□□□□ -1.91
ATG2	YNL242W	YCR001W	P25347	104 aa		3.14	□□□□□ -1.91
ATG2	YNL242W	CCW12	Q12127	133 aa		3.14	□□□□□ -1.91
ATG2	YNL242W	YER187W	P40102	141 aa		3.14	□□□□□ -1.91
ATG2	YNL242W	ARC15	P40518	154 aa	RIP-Chip data	3.13	□□□□□ -1.91	not detected
ATG2	YNL242W	YFL019C	P43576	117 aa		3.13	□□□□□ -1.91
ATG2	YNL242W	DCV1	P43595	202 aa		3.13	□□□□□ -1.91
ATG2	YNL242W	YNL234W	P53857	426 aa		3.13	□□□□□ -1.91
ATG2	YNL242W	SPI1	P40092	148 aa		3.13	□□□□□ -1.91
ATG2	YNL242W	YGR025W	P53216	100 aa		3.13	□□□□□ -1.91
ATG2	YNL242W	YOR034C-A	Q3E735	80 aa		3.13	□□□□□ -1.91
ATG2	YNL242W	SIM1	P40472	476 aa		3.13	□□□□□ -1.91
ATG2	YNL242W	YPR053C	Q6Q5F3	151 aa		3.13	□□□□□ -1.91
ATG2	YNL242W	SFT1	P43682	97 aa		3.12	□□□□□ -1.91
ATG2	YNL242W	IMP2	P46972	177 aa		3.12	□□□□□ -1.91
ATG2	YNL242W	KSH1	Q8TGJ3	72 aa		3.12	□□□□□ -1.91
ATG2	YNL242W	FMP27	Q06179	2628 aa		3.12	□□□□□ -1.91
ATG2	YNL242W	PBP4	Q07362	185 aa	Known RBP	3.12	□□□□□ -1.91
ATG2	YNL242W	COX12	Q01519	83 aa		3.11	□□□□□ -1.91
ATG2	YNL242W	CRC1	Q12289	327 aa		3.11	□□□□□ -1.91
ATG2	YNL242W	YDR381C-A	Q3E6R5	114 aa		3.11	□□□□□ -1.91
ATG2	YNL242W	RRT15	Q3E811	62 aa		3.11	□□□□□ -1.91
ATG2	YNL242W	EDC2	P40023	145 aa	Predicted RBP	3.11	□□□□□ -1.91
ATG2	YNL242W	POR2	P40478	281 aa		3.11	□□□□□ -1.91
ATG2	YNL242W	YDR034W-B	Q6Q5X2	51 aa		3.11	□□□□□ -1.91
ATG2	YNL242W	YCR041W	P37265	110 aa		3.11	□□□□□ -1.91
ATG2	YNL242W	YIR020C	P40575	100 aa		3.11	□□□□□ -1.91
ATG2	YNL242W	MPC2	P38857	129 aa		3.1	□□□□□ -1.91
ATG2	YNL242W	MMS2	P53152	137 aa		3.1	□□□□□ -1.91
ATG2	YNL242W	YML122C	Q03207	126 aa		3.1	□□□□□ -1.91
ATG2	YNL242W	YOR268C	Q08734	132 aa		3.1	□□□□□ -1.91
ATG2	YNL242W	KRE9	P39005	276 aa		3.09	□□□□□ -1.91
ATG2	YNL242W	YJL027C	P47063	138 aa	Predicted RBP	3.09	□□□□□ -1.91
ATG2	YNL242W	AIM4	P38305	123 aa	Predicted RBP	3.09	□□□□□ -1.91
ATG2	YNL242W	ICY1	Q04329	127 aa		3.09	□□□□□ -1.91
ATG2	YNL242W	SGF11	Q03067	99 aa		3.09	□□□□□ -1.92
ATG2	YNL242W	HOR7	Q05827	59 aa		3.09	□□□□□ -1.92
ATG2	YNL242W	YLR156W	P0CE96	114 aa		3.08	□□□□□ -1.92
ATG2	YNL242W	YLR159W	P0CE97	114 aa		3.08	□□□□□ -1.92
ATG2	YNL242W	YLR161W	P0CE98	114 aa		3.08	□□□□□ -1.92
ATG2	YNL242W	WWM1	P43582	211 aa	Known RBP	3.08	□□□□□ -1.92
ATG2	YNL242W	YGR219W	P53307	113 aa		3.08	□□□□□ -1.92
ATG2	YNL242W	HAL1	Q01766	294 aa		3.08	□□□□□ -1.92
ATG2	YNL242W	YOR020W-A	Q3E824	90 aa		3.08	□□□□□ -1.92
ATG2	YNL242W	YBL081W	P38180	368 aa	Known RBP	3.07	□□□□□ -1.92
ATG2	YNL242W	YJR146W	P47174	117 aa		3.07	□□□□□ -1.92
ATG2	YNL242W	YNL277W-A	Q3E7Z0	62 aa		3.07	□□□□□ -1.92
ATG2	YNL242W	RSM19	P53733	91 aa	Predicted RBP	3.07	□□□□□ -1.92
ATG2	YNL242W	YNL042W-B	Q3E7Z2	85 aa		3.07	□□□□□ -1.92
ATG2	YNL242W	YPR010C-A	A5Z2X5	72 aa		3.07	□□□□□ -1.92
ATG2	YNL242W	YER135C	P40082	130 aa		3.07	□□□□□ -1.92
ATG2	YNL242W	MRPS12	P53732	153 aa		3.07	□□□□□ -1.92
ATG2	YNL242W	EDC1	P53080	175 aa	Predicted RBP	3.07	□□□□□ -1.92
ATG2	YNL242W	ATP20	Q12233	115 aa		3.07	□□□□□ -1.92
ATG2	YNL242W	YBR200W-A	Q3E755	54 aa		3.07	□□□□□ -1.92
ATG2	YNL242W	YGL149W	P53116	101 aa		3.06	□□□□□ -1.92
ATG2	YNL242W	YEL008W	P40001	126 aa		3.06	□□□□□ -1.92
ATG2	YNL242W	YOR381W-A	Q3E804	55 aa		3.06	□□□□□ -1.92
ATG2	YNL242W	MIC10	Q96VH5	97 aa		3.06	□□□□□ -1.92
ATG2	YNL242W	QCR8	P08525	94 aa		3.05	□□□□□ -1.92
ATG2	YNL242W	RPS11A	P0CX47	156 aa	Known RBP	3.05	□□□□□ -1.92
ATG2	YNL242W	RPS11B	P0CX48	156 aa	Known RBP	3.05	□□□□□ -1.92
ATG2	YNL242W	YOR376W-A	Q3E805	51 aa		3.05	□□□□□ -1.92
ATG2	YNL242W	YJR107C-A	P0CT86	78 aa		3.05	□□□□□ -1.92
ATG2	YNL242W	SHH4	Q06236	168 aa		3.05	□□□□□ -1.92
ATG2	YNL242W	HUB1	Q6Q546	73 aa		3.05	□□□□□ -1.92
ATG2	YNL242W	ERI1	P62651	68 aa	Known RBP	3.05	□□□□□ -1.92
ATG2	YNL242W	YAL064W	P39711	94 aa		3.04	□□□□□ -1.92
ATG2	YNL242W	YGL041C-B	Q3E750	60 aa		3.04	□□□□□ -1.92
ATG2	YNL242W	AQY2	P0CD90	149 aa		3.04	□□□□□ -1.92
ATG2	YNL242W	DDR48	P18899	430 aa	Known RBP	3.04	□□□□□ -1.92
ATG2	YNL242W	RGM1	Q00453	211 aa		3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms