RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C SUS1Q6WNK7 96 aa0.78□□□□□ -2.28
WHI3YNL197C YBR292CP38357 123 aa0.77□□□□□ -2.29
WHI3YNL197C RSM18P40033 138 aa0.77□□□□□ -2.29
WHI3YNL197C RPS29BP41058 56 aaKnown RBP0.77□□□□□ -2.29
WHI3YNL197C YDR029WQ12111 104 aa0.77□□□□□ -2.29
WHI3YNL197C YCR075W-AQ3E830 75 aa0.77□□□□□ -2.29
WHI3YNL197C SWR1Q05471 1514 aa0.77□□□□□ -2.29
WHI3YNL197C RIM15P43565 1770 aa0.76□□□□□ -2.29
WHI3YNL197C SNU13P39990 126 aaKnown RBP0.76□□□□□ -2.29
WHI3YNL197C PAU4P53427 120 aa0.76□□□□□ -2.29
WHI3YNL197C YDR042CQ03205 200 aa0.76□□□□□ -2.29
WHI3YNL197C YMR082CQ04276 118 aa0.76□□□□□ -2.29
WHI3YNL197C GDB1Q06625 1536 aa0.75□□□□□ -2.29
WHI3YNL197C RPC10P40422 70 aa0.75□□□□□ -2.29
WHI3YNL197C YNL190WP53872 204 aa0.75□□□□□ -2.29
WHI3YNL197C TAO3P40468 2376 aa0.75□□□□□ -2.29
WHI3YNL197C LTE1P07866 1435 aa0.75□□□□□ -2.29
WHI3YNL197C MON2P48563 1636 aaPredicted RBP0.74□□□□□ -2.29
WHI3YNL197C ECM12O13529 151 aa0.74□□□□□ -2.29
WHI3YNL197C MHF2Q3E829 80 aa0.74□□□□□ -2.29
WHI3YNL197C PDX3P38075 228 aaKnown RBP0.73□□□□□ -2.29
WHI3YNL197C TY1B-BLQ12490 1755 aa0.73□□□□□ -2.29
WHI3YNL197C POL1P13382 1468 aa0.73□□□□□ -2.29
WHI3YNL197C ESC1Q03661 1658 aaKnown RBP0.72□□□□□ -2.29
WHI3YNL197C YRF1-2P40105 1681 aa0.72□□□□□ -2.29
WHI3YNL197C BSC4P53841 131 aa0.7□□□□□ -2.3
WHI3YNL197C YSP2Q06681 1438 aa0.69□□□□□ -2.3
WHI3YNL197C YMR175W-AQ3E766 64 aa0.69□□□□□ -2.3
WHI3YNL197C DNF3Q12674 1656 aa0.69□□□□□ -2.3
WHI3YNL197C NHP2P32495 156 aaPredicted RBP0.68□□□□□ -2.3
WHI3YNL197C SCP1Q08873 200 aa0.68□□□□□ -2.3
WHI3YNL197C ESP1Q03018 1630 aa0.68□□□□□ -2.3
WHI3YNL197C YOR343CQ12484 108 aa0.68□□□□□ -2.3
WHI3YNL197C YGL194C-AQ2V2P6 80 aa0.68□□□□□ -2.3
WHI3YNL197C YNL042W-BQ3E7Z2 85 aa0.68□□□□□ -2.3
WHI3YNL197C YNL198CP40166 100 aa0.67□□□□□ -2.3
WHI3YNL197C Q0032Q9ZZX7 96 aa0.67□□□□□ -2.3
WHI3YNL197C YJR107C-AP0CT86 78 aa0.66□□□□□ -2.3
WHI3YNL197C YKL068W-AQ3E826 78 aa0.66□□□□□ -2.3
WHI3YNL197C COX7P10174 60 aa0.65□□□□□ -2.31
WHI3YNL197C RPL38P49167 78 aaKnown RBP0.65□□□□□ -2.31
WHI3YNL197C YBR201C-AQ2V2Q3 67 aa0.65□□□□□ -2.31
WHI3YNL197C TY1B-BRQ12193 1756 aa0.63□□□□□ -2.31
WHI3YNL197C TOR2P32600 2474 aaKnown RBP0.63□□□□□ -2.31
WHI3YNL197C TOM6P33448 61 aa0.63□□□□□ -2.31
WHI3YNL197C IRC20Q06554 1556 aa0.62□□□□□ -2.31
WHI3YNL197C YCR085WP25650 117 aa0.62□□□□□ -2.31
WHI3YNL197C XRN1P22147 1528 aaKnown RBP0.62□□□□□ -2.31
WHI3YNL197C MMS22Q06164 1454 aa0.61□□□□□ -2.31
WHI3YNL197C YHR214C-DP0CX93 97 aa0.61□□□□□ -2.31
WHI3YNL197C CWP2P43497 92 aa0.61□□□□□ -2.31
WHI3YNL197C YKL065W-AQ2V2P2 73 aa0.61□□□□□ -2.31
WHI3YNL197C YAL065CO13511 128 aa0.61□□□□□ -2.31
WHI3YNL197C FPR2P32472 135 aa0.61□□□□□ -2.31
WHI3YNL197C YMR122W-AQ3E842 84 aa0.61□□□□□ -2.31
WHI3YNL197C DNF1P32660 1571 aa0.61□□□□□ -2.31
WHI3YNL197C YFR009W-AP0C5M9 85 aa0.6□□□□□ -2.31
WHI3YNL197C POC4Q12245 148 aaPredicted RBP0.6□□□□□ -2.31
WHI3YNL197C YOR314WQ12506 109 aa0.59□□□□□ -2.31
WHI3YNL197C YOL097W-AQ3E7Y9 61 aa0.59□□□□□ -2.31
WHI3YNL197C TEL1P38110 2787 aa0.59□□□□□ -2.31
WHI3YNL197C TY1B-DR6P0C2I3 1755 aa0.59□□□□□ -2.32
WHI3YNL197C TY1B-LR2P0C2I5 1755 aa0.59□□□□□ -2.32
WHI3YNL197C TY1B-PR3P0C2J1 1755 aaKnown RBP0.59□□□□□ -2.32
WHI3YNL197C TY1B-JR2P47100 1755 aaKnown RBP0.59□□□□□ -2.32
WHI3YNL197C TY1B-MR1Q04214 1755 aa0.59□□□□□ -2.32
WHI3YNL197C TY1B-MR2Q04670 1755 aaKnown RBP0.59□□□□□ -2.32
WHI3YNL197C TY1B-NL1Q12112 1755 aa0.59□□□□□ -2.32
WHI3YNL197C TY1B-GR1Q12141 1755 aa0.59□□□□□ -2.32
WHI3YNL197C TY1B-GR3Q12316 1755 aa0.59□□□□□ -2.32
WHI3YNL197C TY1B-PLQ12414 1755 aaKnown RBP0.59□□□□□ -2.32
WHI3YNL197C TY1B-ORQ92393 1755 aa0.59□□□□□ -2.32
WHI3YNL197C ATX1P38636 73 aa0.59□□□□□ -2.32
WHI3YNL197C ATP18P81450 59 aa0.59□□□□□ -2.32
WHI3YNL197C PAU23Q07987 124 aa0.59□□□□□ -2.32
WHI3YNL197C PAU17Q12370 124 aa0.59□□□□□ -2.32
WHI3YNL197C NOP10Q6Q547 58 aaPredicted RBP0.58□□□□□ -2.32
WHI3YNL197C TY1B-LR3P0C2I6 1755 aaKnown RBP0.58□□□□□ -2.32
WHI3YNL197C MOT1P32333 1867 aa0.57□□□□□ -2.32
WHI3YNL197C TY1B-PR2P0C2J0 1756 aa0.57□□□□□ -2.32
WHI3YNL197C YBR016WP38216 128 aa0.57□□□□□ -2.32
WHI3YNL197C YOR105WQ08504 108 aa0.57□□□□□ -2.32
WHI3YNL197C YDR381C-AQ3E6R5 114 aa0.57□□□□□ -2.32
WHI3YNL197C SDH6Q3E785 79 aa0.57□□□□□ -2.32
WHI3YNL197C ECM29P38737 1868 aa0.56□□□□□ -2.32
WHI3YNL197C YIL134C-AQ45U18 67 aa0.55□□□□□ -2.32
WHI3YNL197C EDC1P53080 175 aaPredicted RBP0.54□□□□□ -2.32
WHI3YNL197C YBR032WP38223 100 aa0.54□□□□□ -2.32
WHI3YNL197C SWM2P40342 146 aa0.54□□□□□ -2.32
WHI3YNL197C YPR145C-AQ2V2P0 78 aa0.54□□□□□ -2.32
WHI3YNL197C YIL156W-BQ2V2P4 73 aa0.54□□□□□ -2.32
WHI3YNL197C UTP10P42945 1769 aaKnown RBP0.53□□□□□ -2.32
WHI3YNL197C TY1B-DR5P0C2I2 1755 aa0.52□□□□□ -2.33
WHI3YNL197C TY1B-PR1P0C2I9 1755 aaKnown RBP0.52□□□□□ -2.33
WHI3YNL197C TY1B-JR1P47098 1755 aa0.52□□□□□ -2.33
WHI3YNL197C TY1B-ML2Q03434 1755 aaKnown RBP0.52□□□□□ -2.33
WHI3YNL197C TY1B-ER1Q03612 1755 aa0.52□□□□□ -2.33
WHI3YNL197C TY1B-ER2Q03619 1755 aa0.52□□□□□ -2.33
WHI3YNL197C TY1B-DR1Q03855 1755 aa0.52□□□□□ -2.33
WHI3YNL197C TY1B-ML1Q04711 1755 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms