RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W YLR412C-AQ3E742 68 aa3.96□□□□□ -1.78
SPG4YMR107W TAO3P40468 2376 aa3.96□□□□□ -1.78
SPG4YMR107W RPL16BP26785 198 aaKnown RBP3.95□□□□□ -1.78
SPG4YMR107W YEL008WP40001 126 aa3.95□□□□□ -1.78
SPG4YMR107W YNL194CP40169 301 aa3.95□□□□□ -1.78
SPG4YMR107W EDC1P53080 175 aaPredicted RBP3.95□□□□□ -1.78
SPG4YMR107W NRM1P53718 249 aa3.95□□□□□ -1.78
SPG4YMR107W YOR034C-AQ3E735 80 aa3.95□□□□□ -1.78
SPG4YMR107W RPL15AP05748 204 aaKnown RBP3.94□□□□□ -1.78
SPG4YMR107W RPS23AP0CX29 145 aaKnown RBP3.94□□□□□ -1.78
SPG4YMR107W RPS23BP0CX30 145 aa3.94□□□□□ -1.78
SPG4YMR107W UBC4P15731 148 aa3.94□□□□□ -1.78
SPG4YMR107W POR2P40478 281 aa3.94□□□□□ -1.78
SPG4YMR107W SED1Q01589 338 aa3.94□□□□□ -1.78
SPG4YMR107W HAL1Q01766 294 aa3.94□□□□□ -1.78
SPG4YMR107W KTI11Q3E840 82 aa3.94□□□□□ -1.78
SPG4YMR107W QCR8P08525 94 aa3.93□□□□□ -1.78
SPG4YMR107W YFR035CP43608 114 aa3.93□□□□□ -1.78
SPG4YMR107W YNL046WP53956 172 aa3.93□□□□□ -1.78
SPG4YMR107W EMC6Q12431 108 aa3.93□□□□□ -1.78
SPG4YMR107W YLR156WP0CE96 114 aa3.92□□□□□ -1.78
SPG4YMR107W YLR159WP0CE97 114 aa3.92□□□□□ -1.78
SPG4YMR107W YLR161WP0CE98 114 aa3.92□□□□□ -1.78
SPG4YMR107W YBR209WP38311 105 aa3.91□□□□□ -1.78
SPG4YMR107W ERI1P62651 68 aaKnown RBP3.91□□□□□ -1.78
SPG4YMR107W SRL1Q08673 210 aa3.91□□□□□ -1.78
SPG4YMR107W BPH1P25356 2167 aa3.9□□□□□ -1.78
SPG4YMR107W YBR219CP38317 127 aa3.9□□□□□ -1.79
SPG4YMR107W COX14P39103 70 aa3.9□□□□□ -1.79
SPG4YMR107W IRC21Q04772 201 aa3.9□□□□□ -1.79
SPG4YMR107W YLR042CQ07990 161 aa3.9□□□□□ -1.79
SPG4YMR107W YLR285C-AQ3E771 56 aa3.9□□□□□ -1.79
SPG4YMR107W YNL146C-AQ3E7Z1 64 aa3.9□□□□□ -1.79
SPG4YMR107W YAL065CO13511 128 aa3.89□□□□□ -1.79
SPG4YMR107W YJR107C-AP0CT86 78 aa3.89□□□□□ -1.79
SPG4YMR107W YOL166W-AQ8TGJ1 51 aa3.89□□□□□ -1.79
SPG4YMR107W SPS100P13130 326 aa3.88□□□□□ -1.79
SPG4YMR107W RPR2P40571 144 aa3.88□□□□□ -1.79
SPG4YMR107W SPG4Q04438 115 aa3.88□□□□□ -1.79
SPG4YMR107W YLR281CQ05863 155 aa3.88□□□□□ -1.79
SPG4YMR107W DAP1Q12091 152 aa3.88□□□□□ -1.79
SPG4YMR107W YCL048W-AQ2V2Q2 79 aa3.88□□□□□ -1.79
SPG4YMR107W HHF1P02309 103 aaKnown RBP3.87□□□□□ -1.79
SPG4YMR107W YER135CP40082 130 aa3.87□□□□□ -1.79
SPG4YMR107W YFL019CP43576 117 aa3.87□□□□□ -1.79
SPG4YMR107W SFT1P43682 97 aa3.87□□□□□ -1.79
SPG4YMR107W YGL088WP53151 121 aa3.87□□□□□ -1.79
SPG4YMR107W YMR295CQ03559 197 aa3.87□□□□□ -1.79
SPG4YMR107W YMR320WQ04897 101 aa3.87□□□□□ -1.79
SPG4YMR107W YFR009W-AP0C5M9 85 aa3.86□□□□□ -1.79
SPG4YMR107W BET1P22804 142 aa3.86□□□□□ -1.79
SPG4YMR107W YLR162WQ06235 118 aa3.86□□□□□ -1.79
SPG4YMR107W ATP20Q12233 115 aa3.86□□□□□ -1.79
SPG4YMR107W RRT15Q3E811 62 aa3.86□□□□□ -1.79
SPG4YMR107W YOR020W-AQ3E824 90 aa3.86□□□□□ -1.79
SPG4YMR107W NOP10Q6Q547 58 aaPredicted RBP3.86□□□□□ -1.79
SPG4YMR107W FMP27Q06179 2628 aa3.85□□□□□ -1.79
SPG4YMR107W YRA2P36036 203 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SPG4YMR107W AIM4P38305 123 aaPredicted RBP3.85□□□□□ -1.79
SPG4YMR107W YGR121W-AQ3E816 71 aa3.85□□□□□ -1.79
SPG4YMR107W MPC3P53311 146 aa3.84□□□□□ -1.79
SPG4YMR107W RSM19P53733 91 aaPredicted RBP3.84□□□□□ -1.79
SPG4YMR107W YNL277W-AQ3E7Z0 62 aa3.84□□□□□ -1.79
SPG4YMR107W YLL006W-AQ3E814 58 aa3.84□□□□□ -1.79
SPG4YMR107W KEG1P43614 200 aa3.83□□□□□ -1.8
SPG4YMR107W ATP18P81450 59 aa3.83□□□□□ -1.8
SPG4YMR107W YMR244WQ04018 355 aa3.83□□□□□ -1.8
SPG4YMR107W YOR268CQ08734 132 aa3.83□□□□□ -1.8
SPG4YMR107W YOR011W-AQ3E807 68 aa3.83□□□□□ -1.8
SPG4YMR107W YDR182W-AQ3E796 67 aa3.82□□□□□ -1.8
SPG4YMR107W YPS5P53057 165 aa3.81□□□□□ -1.8
SPG4YMR107W ICY1Q04329 127 aa3.81□□□□□ -1.8
SPG4YMR107W VAM10Q08474 114 aa3.81□□□□□ -1.8
SPG4YMR107W YGR035W-AQ45U48 73 aa3.81□□□□□ -1.8
SPG4YMR107W YOL014WQ08110 124 aa3.8□□□□□ -1.8
SPG4YMR107W TAR1Q8TGM6 124 aa3.8□□□□□ -1.8
SPG4YMR107W MRPS8Q03799 155 aa3.79□□□□□ -1.8
SPG4YMR107W RPL29P05747 59 aaPredicted RBP3.78□□□□□ -1.8
SPG4YMR107W RSM18P40033 138 aa3.78□□□□□ -1.8
SPG4YMR107W ICS3P47034 131 aa3.78□□□□□ -1.8
SPG4YMR107W CRC1Q12289 327 aa3.78□□□□□ -1.8
SPG4YMR107W MIC10Q96VH5 97 aa3.78□□□□□ -1.8
SPG4YMR107W GCN1P33892 2672 aaKnown RBP3.77□□□□□ -1.81
SPG4YMR107W RPL36BO14455 100 aaKnown RBP3.77□□□□□ -1.81
SPG4YMR107W RPL36AP05745 100 aaPredicted RBP3.77□□□□□ -1.81
SPG4YMR107W YOR314WQ12506 109 aa3.77□□□□□ -1.81
SPG4YMR107W YAR029WP39549 74 aa3.76□□□□□ -1.81
SPG4YMR107W YDR274CP87283 123 aa3.76□□□□□ -1.81
SPG4YMR107W YMR122W-AQ3E842 84 aa3.76□□□□□ -1.81
SPG4YMR107W RPB9P27999 122 aa3.75□□□□□ -1.81
SPG4YMR107W YKL183C-AQ3E765 70 aa3.75□□□□□ -1.81
SPG4YMR107W YNL162W-AQ3E7A8 72 aa3.75□□□□□ -1.81
SPG4YMR107W RPL26AP05743 127 aaKnown RBP3.74□□□□□ -1.81
SPG4YMR107W SPT4P32914 102 aaPredicted RBP3.74□□□□□ -1.81
SPG4YMR107W YHL005CP38752 130 aa3.74□□□□□ -1.81
SPG4YMR107W RPL26BP53221 127 aaKnown RBP3.74□□□□□ -1.81
SPG4YMR107W SMD1Q02260 146 aaPredicted RBP3.73□□□□□ -1.81
SPG4YMR107W YIR020CP40575 100 aa3.72□□□□□ -1.81
SPG4YMR107W PMP3P87284 55 aa3.72□□□□□ -1.81
SPG4YMR107W RDS3Q06835 107 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms