RNA–Protein interactions for RNA: YLR410W-B

YLR410W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR410W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR410W-BYLR410W-B YDL012CQ12489 107 aa1.9□□□□□ -2.1
YLR410W-BYLR410W-B RPS30AP0CX33 63 aaKnown RBP1.9□□□□□ -2.11
YLR410W-BYLR410W-B RPS30BP0CX34 63 aaKnown RBP1.9□□□□□ -2.11
YLR410W-BYLR410W-B EDC1P53080 175 aaPredicted RBP1.9□□□□□ -2.11
YLR410W-BYLR410W-B YPR153WQ06537 140 aa1.9□□□□□ -2.11
YLR410W-BYLR410W-B YCF1P39109 1515 aaKnown RBP1.9□□□□□ -2.11
YLR410W-BYLR410W-B YPL038W-AQ3E7B4 63 aa1.9□□□□□ -2.11
YLR410W-BYLR410W-B HIR3P47171 1648 aa1.9□□□□□ -2.11
YLR410W-BYLR410W-B SNF2P22082 1703 aa1.9□□□□□ -2.11
YLR410W-BYLR410W-B POR2P40478 281 aa1.9□□□□□ -2.11
YLR410W-BYLR410W-B SOM1Q05676 74 aa1.89□□□□□ -2.11
YLR410W-BYLR410W-B PEP1P32319 1579 aa1.89□□□□□ -2.11
YLR410W-BYLR410W-B RKR1Q04781 1562 aa1.89□□□□□ -2.11
YLR410W-BYLR410W-B NTE1Q04958 1679 aa1.89□□□□□ -2.11
YLR410W-BYLR410W-B PFY1P07274 126 aa1.89□□□□□ -2.11
YLR410W-BYLR410W-B PRM7Q12459 698 aa1.89□□□□□ -2.11
YLR410W-BYLR410W-B YOR314WQ12506 109 aa1.89□□□□□ -2.11
YLR410W-BYLR410W-B COA2Q3E823 68 aa1.89□□□□□ -2.11
YLR410W-BYLR410W-B RPB7P34087 171 aa1.89□□□□□ -2.11
YLR410W-BYLR410W-B BPT1P14772 1559 aa1.88□□□□□ -2.11
YLR410W-BYLR410W-B YGR269WP40326 108 aa1.88□□□□□ -2.11
YLR410W-BYLR410W-B SED1Q01589 338 aa1.88□□□□□ -2.11
YLR410W-BYLR410W-B HUB1Q6Q546 73 aa1.88□□□□□ -2.11
YLR410W-BYLR410W-B RIF1P29539 1916 aa1.88□□□□□ -2.11
YLR410W-BYLR410W-B DNF1P32660 1571 aa1.88□□□□□ -2.11
YLR410W-BYLR410W-B YMR122CQ03879 124 aa1.88□□□□□ -2.11
YLR410W-BYLR410W-B HUG1Q6Q5K6 68 aa1.88□□□□□ -2.11
YLR410W-BYLR410W-B YHR213WP0CI67 198 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B TY1B-GR3Q12316 1755 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B TY1B-ORQ92393 1755 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B DNF2Q12675 1612 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B TY1B-JR2P47100 1755 aaKnown RBP1.87□□□□□ -2.11
YLR410W-BYLR410W-B TY1B-ER2Q03619 1755 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B TY1B-MR1Q04214 1755 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B TY1B-MR2Q04670 1755 aaKnown RBP1.87□□□□□ -2.11
YLR410W-BYLR410W-B TY1B-LR1Q12088 1755 aaKnown RBP1.87□□□□□ -2.11
YLR410W-BYLR410W-B TY1B-NL1Q12112 1755 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B TY1B-GR1Q12141 1755 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B TY1B-BLQ12490 1755 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B RPO21P04050 1733 aaKnown RBP1.87□□□□□ -2.11
YLR410W-BYLR410W-B YJL144WP47009 104 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B YOL118CQ08259 102 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B YIL156W-BQ2V2P4 73 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B BNI1P41832 1953 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B YLR157W-DP0CE99 70 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B YMR321CQ04898 105 aa1.87□□□□□ -2.11
YLR410W-BYLR410W-B NOP10Q6Q547 58 aaPredicted RBP1.86□□□□□ -2.11
YLR410W-BYLR410W-B CHC1P22137 1653 aaKnown RBP1.86□□□□□ -2.11
YLR410W-BYLR410W-B YBR219CP38317 127 aa1.86□□□□□ -2.11
YLR410W-BYLR410W-B BRP1P53194 125 aa1.86□□□□□ -2.11
YLR410W-BYLR410W-B ESP1Q03018 1630 aa1.86□□□□□ -2.11
YLR410W-BYLR410W-B LCL2Q08045 131 aa1.86□□□□□ -2.11
YLR410W-BYLR410W-B SDH6Q3E785 79 aa1.86□□□□□ -2.11
YLR410W-BYLR410W-B FPR1P20081 114 aaKnown RBP1.85□□□□□ -2.11
YLR410W-BYLR410W-B YNL122CP53921 115 aaPredicted RBP1.85□□□□□ -2.11
YLR410W-BYLR410W-B HSP150P32478 413 aa1.85□□□□□ -2.11
YLR410W-BYLR410W-B MLP2P40457 1679 aa1.85□□□□□ -2.11
YLR410W-BYLR410W-B YRF1-1P0CX20 1796 aa1.85□□□□□ -2.11
YLR410W-BYLR410W-B YRF1-5P0CX21 1796 aa1.85□□□□□ -2.11
YLR410W-BYLR410W-B YRF1-8P0CX22 1796 aa1.85□□□□□ -2.11
YLR410W-BYLR410W-B YMR141CP40211 102 aa1.85□□□□□ -2.11
YLR410W-BYLR410W-B FAB1P34756 2278 aa1.85□□□□□ -2.11
YLR410W-BYLR410W-B YER188C-AP0C0V2 99 aa1.85□□□□□ -2.11
YLR410W-BYLR410W-B SHU1P38751 150 aa1.85□□□□□ -2.11
YLR410W-BYLR410W-B MIX14Q04341 121 aa1.84□□□□□ -2.11
YLR410W-BYLR410W-B NUP188P52593 1655 aaKnown RBP1.84□□□□□ -2.11
YLR410W-BYLR410W-B YJR107C-AP0CT86 78 aa1.84□□□□□ -2.11
YLR410W-BYLR410W-B PDR15Q04182 1529 aaKnown RBP1.84□□□□□ -2.11
YLR410W-BYLR410W-B RTC6O14464 93 aa1.84□□□□□ -2.12
YLR410W-BYLR410W-B BSC4P53841 131 aa1.84□□□□□ -2.12
YLR410W-BYLR410W-B YKL023C-AQ2V2P3 75 aa1.84□□□□□ -2.12
YLR410W-BYLR410W-B YOR008C-AQ3E7B9 74 aa1.84□□□□□ -2.12
YLR410W-BYLR410W-B GDB1Q06625 1536 aa1.84□□□□□ -2.12
YLR410W-BYLR410W-B TY1B-NL2Q99337 1749 aaKnown RBP1.84□□□□□ -2.12
YLR410W-BYLR410W-B Q0032Q9ZZX7 96 aa1.84□□□□□ -2.12
YLR410W-BYLR410W-B RGM1Q00453 211 aa1.83□□□□□ -2.12
YLR410W-BYLR410W-B YEL014CP39999 101 aa1.83□□□□□ -2.12
YLR410W-BYLR410W-B MIX17Q03667 156 aa1.82□□□□□ -2.12
YLR410W-BYLR410W-B YEL008WP40001 126 aa1.82□□□□□ -2.12
YLR410W-BYLR410W-B ULS1Q08562 1619 aa1.82□□□□□ -2.12
YLR410W-BYLR410W-B YKL065W-AQ2V2P2 73 aa1.82□□□□□ -2.12
YLR410W-BYLR410W-B QCR8P08525 94 aa1.81□□□□□ -2.12
YLR410W-BYLR410W-B MVB12P42939 101 aa1.81□□□□□ -2.12
YLR410W-BYLR410W-B ARO1P08566 1588 aaKnown RBP1.81□□□□□ -2.12
YLR410W-BYLR410W-B YRF1-2P40105 1681 aa1.81□□□□□ -2.12
YLR410W-BYLR410W-B CDC39P25655 2108 aaKnown RBP1.81□□□□□ -2.12
YLR410W-BYLR410W-B SIP18P50263 79 aa1.81□□□□□ -2.12
YLR410W-BYLR410W-B YLR162WQ06235 118 aa1.81□□□□□ -2.12
YLR410W-BYLR410W-B YGR121W-AQ3E816 71 aa1.81□□□□□ -2.12
YLR410W-BYLR410W-B MRX7P53869 86 aa1.81□□□□□ -2.12
YLR410W-BYLR410W-B RRP5Q05022 1729 aaKnown RBP1.81□□□□□ -2.12
YLR410W-BYLR410W-B COX12Q01519 83 aa1.81□□□□□ -2.12
YLR410W-BYLR410W-B YMR175W-AQ3E766 64 aa1.81□□□□□ -2.12
YLR410W-BYLR410W-B YNL042W-BQ3E7Z2 85 aa1.81□□□□□ -2.12
YLR410W-BYLR410W-B MYO1P08964 1928 aa1.8□□□□□ -2.12
YLR410W-BYLR410W-B COX9P07255 59 aa1.8□□□□□ -2.12
YLR410W-BYLR410W-B GIS2P53849 153 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
YLR410W-BYLR410W-B YBL044WP38194 122 aa1.8□□□□□ -2.12
YLR410W-BYLR410W-B YBR201C-AQ2V2Q3 67 aa1.8□□□□□ -2.12
YLR410W-BYLR410W-B TAR1Q8TGM6 124 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms