RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	YBR090C	P38253	122 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	SKI6	P46948	246 aa	Predicted RBP	0.56	□□□□□ -2.32
YCS4	YLR272C	TOS6	P48560	102 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	YIL014C-A	Q02598	104 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	DYN2	Q02647	92 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	YDR102C	Q03864	110 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	GPI19	Q04082	140 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	RPS11A	P0CX47	156 aa	Known RBP	0.56	□□□□□ -2.32
YCS4	YLR272C	RPS11B	P0CX48	156 aa	Known RBP	0.56	□□□□□ -2.32
YCS4	YLR272C	PAU16	P35994	123 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	LST8	P41318	303 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	SPC1	P46965	94 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	MGR2	Q02889	113 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	YMR252C	Q04814	134 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	PAU23	Q07987	124 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	FIT3	Q08907	204 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	PAU17	Q12370	124 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	YNR034W-A	Q3E841	98 aa		0.56	□□□□□ -2.32
YCS4	YLR272C	RPL43A	P0CX25	92 aa	Known RBP	0.55	□□□□□ -2.32
YCS4	YLR272C	RPL43B	P0CX26	92 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	YHL005C	P38752	130 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	YGR035W-A	Q45U48	73 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	HUG1	Q6Q5K6	68 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	YER039C-A	P0CD97	72 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	YER181C	P40097	107 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	VPS55	P47111	140 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	DAD1	Q12248	94 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	COA3	Q3E7B2	85 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	MRPL38	P35996	138 aa	Predicted RBP	0.55	□□□□□ -2.32
YCS4	YLR272C	DAD3	P69850	94 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	YDR042C	Q03205	200 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	YMR175W-A	Q3E766	64 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	Q0297	Q9ZZV8	51 aa		0.55	□□□□□ -2.32
YCS4	YLR272C	RPL29	P05747	59 aa	Predicted RBP	0.54	□□□□□ -2.32
YCS4	YLR272C	YHR213W	P0CI67	198 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	ATG8	P38182	117 aa	RIP-Chip data	0.54	□□□□□ -2.32	not detected
YCS4	YLR272C	IMP2	P46972	177 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	SNN1	P48232	102 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	ERV14	P53173	138 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	YNL190W	P53872	204 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	PMP3	P87284	55 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	SAE3	P89114	91 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	COA4	Q05809	96 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	COA2	Q3E823	68 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	YMR105W-A	Q8TGS8	64 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	MRPL31	P14063	131 aa	Predicted RBP	0.54	□□□□□ -2.32
YCS4	YLR272C	MSL1	P40567	111 aa	Predicted RBP	0.54	□□□□□ -2.32
YCS4	YLR272C	VMA21	P41806	77 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	YCR085W	P25650	117 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	YMR141C	P40211	102 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	RPL37A	P49166	88 aa	Known RBP	0.54	□□□□□ -2.32
YCS4	YLR272C	SGF11	Q03067	99 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	YLR307C-A	Q3E825	87 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	YMR122W-A	Q3E842	84 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	ENV10	Q99382	181 aa		0.54	□□□□□ -2.32
YCS4	YLR272C	FUN14	P18411	198 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	YHR130C	P38834	111 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	YMR007W	Q03675	126 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	YCL048W-A	Q2V2Q2	79 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	YGL041C-B	Q3E750	60 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	YOR008C-A	Q3E7B9	74 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	YCL001W-B	Q96VH2	84 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	SSS1	P35179	80 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	RPC10	P40422	70 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	AIM19	P40502	157 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	PAM16	P42949	149 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	DAD4	P69851	72 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	COX12	Q01519	83 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	YDR210W	Q03482	75 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	YMR320W	Q04897	101 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	YLR194C	Q05777	254 aa		0.53	□□□□□ -2.32
YCS4	YLR272C	YBL039W-B	P0C268	59 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	YGL010W	P25338	174 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	SVP26	P38869	228 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	YIL102C-A	Q2V2P5	75 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	YLR363W-A	Q3E747	85 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	YBR200W-A	Q3E755	54 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	RPL39	P04650	51 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.52	□□□□□ -2.33	not detected
YCS4	YLR272C	MRPL11	P36521	249 aa	Predicted RBP	0.52	□□□□□ -2.33
YCS4	YLR272C	DCV1	P43595	202 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	THG1	P53215	237 aa	Known RBP	0.52	□□□□□ -2.33
YCS4	YLR272C	POC4	Q12245	148 aa	Predicted RBP	0.52	□□□□□ -2.33
YCS4	YLR272C	YGL194C-A	Q2V2P6	80 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	YOS1	Q3E834	85 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	BRR2	P32639	2163 aa	Known RBP	0.52	□□□□□ -2.33
YCS4	YLR272C	PAI3	P01094	68 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	RPL33A	P05744	107 aa	Known RBP	0.52	□□□□□ -2.33
YCS4	YLR272C	UBC4	P15731	148 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	YER187W	P40102	141 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	YNL200C	P40165	246 aa	Known RBP	0.52	□□□□□ -2.33
YCS4	YLR272C	CWP2	P43497	92 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	RPL37B	P51402	88 aa	Known RBP	0.52	□□□□□ -2.33
YCS4	YLR272C	RSM19	P53733	91 aa	Predicted RBP	0.52	□□□□□ -2.33
YCS4	YLR272C	ICY1	Q04329	127 aa		0.52	□□□□□ -2.33
YCS4	YLR272C	FYV5	P25585	152 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	SHU1	P38751	150 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	YIL102C	P40488	101 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	ELC1	Q03071	99 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	YOR192C-C	Q3E736	78 aa		0.51	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 132.9 ms