RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C YHL018WP38744 120 aaPredicted RBP3.36□□□□□ -1.87
UBI4YLL039C CCW12Q12127 133 aa3.36□□□□□ -1.87
UBI4YLL039C EMC6Q12431 108 aa3.36□□□□□ -1.87
UBI4YLL039C YDR381C-AQ3E6R5 114 aa3.36□□□□□ -1.87
UBI4YLL039C COA3Q3E7B2 85 aa3.36□□□□□ -1.87
UBI4YLL039C HOT13P36078 116 aa3.35□□□□□ -1.87
UBI4YLL039C SMP1P38128 452 aa3.35□□□□□ -1.87
UBI4YLL039C SVP26P38869 228 aa3.35□□□□□ -1.87
UBI4YLL039C PET8P38921 284 aa3.35□□□□□ -1.87
UBI4YLL039C MIG3P39943 394 aa3.35□□□□□ -1.87
UBI4YLL039C PEX17P40155 199 aa3.35□□□□□ -1.87
UBI4YLL039C KNH1P50112 268 aa3.35□□□□□ -1.87
UBI4YLL039C YNR077CP53758 84 aa3.35□□□□□ -1.87
UBI4YLL039C MRPS8Q03799 155 aa3.35□□□□□ -1.87
UBI4YLL039C TIM22Q12328 207 aa3.35□□□□□ -1.87
UBI4YLL039C YOR008C-AQ3E7B9 74 aa3.35□□□□□ -1.87
UBI4YLL039C YCL021W-AQ96VH3 125 aa3.35□□□□□ -1.87
UBI4YLL039C TRP1P00912 224 aa3.34□□□□□ -1.87
UBI4YLL039C RPL16BP26785 198 aaKnown RBP3.34□□□□□ -1.87
UBI4YLL039C YKR032WP36127 104 aa3.34□□□□□ -1.87
UBI4YLL039C YSY6P38374 65 aa3.34□□□□□ -1.87
UBI4YLL039C YHR022CP38763 256 aa3.34□□□□□ -1.87
UBI4YLL039C YMR141CP40211 102 aa3.34□□□□□ -1.87
UBI4YLL039C DCV1P43595 202 aa3.34□□□□□ -1.87
UBI4YLL039C RSM19P53733 91 aaPredicted RBP3.34□□□□□ -1.87
UBI4YLL039C QCR8P08525 94 aa3.33□□□□□ -1.88
UBI4YLL039C RPL42AP0CX27 106 aaKnown RBP3.33□□□□□ -1.88
UBI4YLL039C RPL42BP0CX28 106 aaKnown RBP3.33□□□□□ -1.88
UBI4YLL039C RPL2AP0CX45 254 aaKnown RBP3.33□□□□□ -1.88
UBI4YLL039C RPL2BP0CX46 254 aaKnown RBP3.33□□□□□ -1.88
UBI4YLL039C HMRA2P0CY13 119 aa3.33□□□□□ -1.88
UBI4YLL039C YRA2P36036 203 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
UBI4YLL039C YIA6P40556 373 aa3.33□□□□□ -1.88
UBI4YLL039C ATP23P53722 227 aa3.33□□□□□ -1.88
UBI4YLL039C KTI12P34253 313 aaKnown RBP3.32□□□□□ -1.88
UBI4YLL039C RDS3Q06835 107 aaPredicted RBP3.32□□□□□ -1.88
UBI4YLL039C YOL085CQ99345 113 aa3.32□□□□□ -1.88
UBI4YLL039C RPS11AP0CX47 156 aaKnown RBP3.31□□□□□ -1.88
UBI4YLL039C RPS11BP0CX48 156 aaKnown RBP3.31□□□□□ -1.88
UBI4YLL039C YCR050CP25630 102 aa3.31□□□□□ -1.88
UBI4YLL039C MSA2P36157 363 aa3.31□□□□□ -1.88
UBI4YLL039C YEL067CP39978 195 aa3.31□□□□□ -1.88
UBI4YLL039C YFR035CP43608 114 aa3.31□□□□□ -1.88
UBI4YLL039C AGA1P32323 725 aa3.3□□□□□ -1.88
UBI4YLL039C ERG28P40030 148 aa3.3□□□□□ -1.88
UBI4YLL039C RRT13P40042 185 aa3.3□□□□□ -1.88
UBI4YLL039C VHS2P40463 436 aa3.3□□□□□ -1.88
UBI4YLL039C YNL277W-AQ3E7Z0 62 aa3.3□□□□□ -1.88
UBI4YLL039C UBC4P15731 148 aa3.29□□□□□ -1.88
UBI4YLL039C DSE2P38844 325 aa3.29□□□□□ -1.88
UBI4YLL039C KEG1P43614 200 aa3.29□□□□□ -1.88
UBI4YLL039C YFR057WP43625 151 aa3.29□□□□□ -1.88
UBI4YLL039C HUR1P45820 110 aa3.29□□□□□ -1.88
UBI4YLL039C HAL1Q01766 294 aa3.29□□□□□ -1.88
UBI4YLL039C PBA1Q05778 276 aa3.29□□□□□ -1.88
UBI4YLL039C VAM10Q08474 114 aa3.29□□□□□ -1.88
UBI4YLL039C YBL112CQ3E7Y4 105 aa3.29□□□□□ -1.88
UBI4YLL039C YOR020W-AQ3E824 90 aa3.29□□□□□ -1.88
UBI4YLL039C RPL18AP0CX49 186 aaKnown RBP3.28□□□□□ -1.88
UBI4YLL039C RPL18BP0CX50 186 aaKnown RBP3.28□□□□□ -1.88
UBI4YLL039C YCR001WP25347 104 aa3.28□□□□□ -1.88
UBI4YLL039C YKL183C-AQ3E765 70 aa3.28□□□□□ -1.88
UBI4YLL039C YDL022C-AP0C5L6 82 aa3.27□□□□□ -1.89
UBI4YLL039C YAR029WP39549 74 aa3.27□□□□□ -1.89
UBI4YLL039C YER187WP40102 141 aa3.27□□□□□ -1.89
UBI4YLL039C SGF11Q03067 99 aa3.27□□□□□ -1.89
UBI4YLL039C YBR200W-AQ3E755 54 aa3.27□□□□□ -1.89
UBI4YLL039C YMR175W-AQ3E766 64 aa3.27□□□□□ -1.89
UBI4YLL039C YPL229WQ99395 206 aa3.27□□□□□ -1.89
UBI4YLL039C BET1P22804 142 aa3.26□□□□□ -1.89
UBI4YLL039C RGM1Q00453 211 aa3.26□□□□□ -1.89
UBI4YLL039C PPT2Q12036 173 aa3.26□□□□□ -1.89
UBI4YLL039C KSH1Q8TGJ3 72 aa3.26□□□□□ -1.89
UBI4YLL039C VTC1P40046 129 aaRIP-Chip data3.25□□□□□ -1.89not detected
UBI4YLL039C YPS5P53057 165 aa3.25□□□□□ -1.89
UBI4YLL039C MRPS12P53732 153 aa3.25□□□□□ -1.89
UBI4YLL039C YLR042CQ07990 161 aa3.25□□□□□ -1.89
UBI4YLL039C YDR182W-AQ3E796 67 aa3.25□□□□□ -1.89
UBI4YLL039C ATP15P21306 62 aa3.24□□□□□ -1.89
UBI4YLL039C SHU1P38751 150 aa3.24□□□□□ -1.89
UBI4YLL039C YJR146WP47174 117 aa3.24□□□□□ -1.89
UBI4YLL039C YLR236CA0A023PZG4 107 aa3.23□□□□□ -1.89
UBI4YLL039C YAL065CO13511 128 aa3.23□□□□□ -1.89
UBI4YLL039C YKL065W-AQ2V2P2 73 aa3.23□□□□□ -1.89
UBI4YLL039C YGR240C-AQ3E786 66 aa3.23□□□□□ -1.89
UBI4YLL039C RPL28P02406 149 aaKnown RBP3.22□□□□□ -1.89
UBI4YLL039C KRE9P39005 276 aa3.22□□□□□ -1.89
UBI4YLL039C GAT4P40569 121 aa3.22□□□□□ -1.89
UBI4YLL039C RPR2P40571 144 aa3.22□□□□□ -1.89
UBI4YLL039C SFT1P43682 97 aa3.22□□□□□ -1.89
UBI4YLL039C IRC21Q04772 201 aa3.22□□□□□ -1.89
UBI4YLL039C YLR285C-AQ3E771 56 aa3.22□□□□□ -1.89
UBI4YLL039C YJR107C-AP0CT86 78 aa3.21□□□□□ -1.9
UBI4YLL039C AIM4P38305 123 aaPredicted RBP3.21□□□□□ -1.9
UBI4YLL039C ARC15P40518 154 aaRIP-Chip data3.21□□□□□ -1.9not detected
UBI4YLL039C MMS2P53152 137 aa3.21□□□□□ -1.9
UBI4YLL039C RPL16AP26784 199 aaKnown RBP3.2□□□□□ -1.9
UBI4YLL039C YMR320WQ04897 101 aa3.2□□□□□ -1.9
UBI4YLL039C CRC1Q12289 327 aa3.2□□□□□ -1.9
UBI4YLL039C YOR314WQ12506 109 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms