RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C RPL28P02406 149 aaKnown RBP7.63□□□□□ -1.19
YKR040CYKR040C YKL044WP36092 106 aa7.63□□□□□ -1.19
YKR040CYKR040C MBF1O14467 151 aaKnown RBP7.62□□□□□ -1.19
YKR040CYKR040C YBL039W-BP0C268 59 aa7.62□□□□□ -1.19
YKR040CYKR040C HAP3P13434 144 aa7.62□□□□□ -1.19
YKR040CYKR040C MRPL44P19956 98 aa7.62□□□□□ -1.19
YKR040CYKR040C AIM19P40502 157 aa7.62□□□□□ -1.19
YKR040CYKR040C YFL019CP43576 117 aa7.62□□□□□ -1.19
YKR040CYKR040C YPL073CP40323 161 aa7.61□□□□□ -1.19
YKR040CYKR040C MSL1P40567 111 aaPredicted RBP7.6□□□□□ -1.19
YKR040CYKR040C YGL230CP53074 147 aa7.6□□□□□ -1.19
YKR040CYKR040C YML079WQ03629 201 aa7.59□□□□□ -1.19
YKR040CYKR040C YLL006W-AQ3E814 58 aa7.59□□□□□ -1.19
YKR040CYKR040C IGO2Q9P305 131 aa7.59□□□□□ -1.19
YKR040CYKR040C YEL067CP39978 195 aa7.58□□□□□ -1.2
YKR040CYKR040C IGD1P43598 195 aa7.57□□□□□ -1.2
YKR040CYKR040C DDR48P18899 430 aaKnown RBP7.56□□□□□ -1.2
YKR040CYKR040C UGX2P32772 223 aa7.56□□□□□ -1.2
YKR040CYKR040C YNL190WP53872 204 aa7.56□□□□□ -1.2
YKR040CYKR040C YNR077CP53758 84 aa7.55□□□□□ -1.2
YKR040CYKR040C UBC11P52492 156 aa7.54□□□□□ -1.2
YKR040CYKR040C YBL112CQ3E7Y4 105 aa7.54□□□□□ -1.2
YKR040CYKR040C YDL157CQ12082 118 aa7.53□□□□□ -1.2
YKR040CYKR040C YGL193CP53097 103 aa7.52□□□□□ -1.21
YKR040CYKR040C EOS1P53938 366 aa7.52□□□□□ -1.21
YKR040CYKR040C HPA2Q06592 156 aa7.52□□□□□ -1.21
YKR040CYKR040C RPL29P05747 59 aaPredicted RBP7.51□□□□□ -1.21
YKR040CYKR040C YFR057WP43625 151 aa7.51□□□□□ -1.21
YKR040CYKR040C YCR007CP25354 239 aa7.5□□□□□ -1.21
YKR040CYKR040C CGR1P53188 120 aa7.5□□□□□ -1.21
YKR040CYKR040C ATP5P09457 212 aa7.49□□□□□ -1.21
YKR040CYKR040C FUN14P18411 198 aa7.49□□□□□ -1.21
YKR040CYKR040C NAT5Q08689 176 aa7.49□□□□□ -1.21
YKR040CYKR040C YKL023C-AQ2V2P3 75 aa7.48□□□□□ -1.21
YKR040CYKR040C MID2P36027 376 aa7.47□□□□□ -1.21
YKR040CYKR040C FYV7Q12247 151 aa7.47□□□□□ -1.21
YKR040CYKR040C UBC4P15731 148 aa7.46□□□□□ -1.22
YKR040CYKR040C KNH1P50112 268 aa7.46□□□□□ -1.22
YKR040CYKR040C MHR1Q06630 226 aa7.45□□□□□ -1.22
YKR040CYKR040C YOR020W-AQ3E824 90 aa7.44□□□□□ -1.22
YKR040CYKR040C YLR415CO13578 112 aa7.43□□□□□ -1.22
YKR040CYKR040C YIA6P40556 373 aa7.43□□□□□ -1.22
YKR040CYKR040C YDR010CQ12426 110 aa7.43□□□□□ -1.22
YKR040CYKR040C YNL162W-AQ3E7A8 72 aa7.43□□□□□ -1.22
YKR040CYKR040C CPR1P14832 162 aaKnown RBP7.42□□□□□ -1.22
YKR040CYKR040C YGL149WP53116 101 aa7.42□□□□□ -1.22
YKR040CYKR040C HYP2P23301 157 aaKnown RBP7.41□□□□□ -1.22
YKR040CYKR040C PAU17Q12370 124 aa7.41□□□□□ -1.22
YKR040CYKR040C YER039C-AP0CD97 72 aa7.4□□□□□ -1.22
YKR040CYKR040C COX10P21592 462 aa7.4□□□□□ -1.22
YKR040CYKR040C RGM1Q00453 211 aa7.4□□□□□ -1.22
YKR040CYKR040C RPL26AP05743 127 aaKnown RBP7.39□□□□□ -1.23
YKR040CYKR040C RPL26BP53221 127 aaKnown RBP7.39□□□□□ -1.23
YKR040CYKR040C ELC1Q03071 99 aa7.38□□□□□ -1.23
YKR040CYKR040C ICY1Q04329 127 aa7.37□□□□□ -1.23
YKR040CYKR040C IRC21Q04772 201 aa7.37□□□□□ -1.23
YKR040CYKR040C YLR156WP0CE96 114 aa7.36□□□□□ -1.23
YKR040CYKR040C YLR159WP0CE97 114 aa7.36□□□□□ -1.23
YKR040CYKR040C YLR161WP0CE98 114 aa7.36□□□□□ -1.23
YKR040CYKR040C DDR2P89113 61 aa7.36□□□□□ -1.23
YKR040CYKR040C YPL257WQ08974 193 aa7.36□□□□□ -1.23
YKR040CYKR040C SCM4P32564 187 aa7.35□□□□□ -1.23
YKR040CYKR040C YNL042W-BQ3E7Z2 85 aa7.35□□□□□ -1.23
YKR040CYKR040C EDC2P40023 145 aaPredicted RBP7.34□□□□□ -1.23
YKR040CYKR040C LSM8P47093 109 aaKnown RBP7.34□□□□□ -1.23
YKR040CYKR040C YHR130CP38834 111 aa7.33□□□□□ -1.24
YKR040CYKR040C ARO2P28777 376 aaKnown RBP7.32□□□□□ -1.24
YKR040CYKR040C YOR268CQ08734 132 aa7.32□□□□□ -1.24
YKR040CYKR040C YBR230W-AQ3E762 66 aa7.32□□□□□ -1.24
YKR040CYKR040C SPT4P32914 102 aaPredicted RBP7.31□□□□□ -1.24
YKR040CYKR040C YJL127C-BQ3E828 52 aa7.31□□□□□ -1.24
YKR040CYKR040C YJL197C-AP0C5P0 93 aa7.3□□□□□ -1.24
YKR040CYKR040C SAE3P89114 91 aa7.3□□□□□ -1.24
YKR040CYKR040C PAU23Q07987 124 aa7.3□□□□□ -1.24
YKR040CYKR040C YDL085C-AQ3E7B7 68 aaKnown RBP7.3□□□□□ -1.24
YKR040CYKR040C SPG1P50088 95 aa7.29□□□□□ -1.24
YKR040CYKR040C YGR121W-AQ3E816 71 aa7.29□□□□□ -1.24
YKR040CYKR040C FYV5P25585 152 aa7.28□□□□□ -1.24
YKR040CYKR040C YOR034C-AQ3E735 80 aa7.27□□□□□ -1.25
YKR040CYKR040C YLR363W-AQ3E747 85 aa7.27□□□□□ -1.25
YKR040CYKR040C YER181CP40097 107 aa7.25□□□□□ -1.25
YKR040CYKR040C YLR236CA0A023PZG4 107 aa7.24□□□□□ -1.25
YKR040CYKR040C YJR085CP47131 105 aaKnown RBP7.24□□□□□ -1.25
YKR040CYKR040C KTI11Q3E840 82 aa7.24□□□□□ -1.25
YKR040CYKR040C NHP2P32495 156 aaPredicted RBP7.23□□□□□ -1.25
YKR040CYKR040C BSC4P53841 131 aa7.23□□□□□ -1.25
YKR040CYKR040C PAI3P01094 68 aa7.2□□□□□ -1.26
YKR040CYKR040C MRPL24P36525 258 aaPredicted RBP7.2□□□□□ -1.26
YKR040CYKR040C YHR007C-AQ07074 71 aa7.2□□□□□ -1.26
YKR040CYKR040C KRE1P17260 313 aa7.19□□□□□ -1.26
YKR040CYKR040C POP7P38291 140 aa7.18□□□□□ -1.26
YKR040CYKR040C MET32Q12041 191 aa7.18□□□□□ -1.26
YKR040CYKR040C HUR1P45820 110 aa7.17□□□□□ -1.26
YKR040CYKR040C LSM6Q06406 86 aaKnown RBP7.17□□□□□ -1.26
YKR040CYKR040C ISU2Q12056 156 aa7.17□□□□□ -1.26
YKR040CYKR040C BET1P22804 142 aa7.16□□□□□ -1.26
YKR040CYKR040C YOR072WQ08486 104 aa7.15□□□□□ -1.26
YKR040CYKR040C KSH1Q8TGJ3 72 aa7.15□□□□□ -1.26
YKR040CYKR040C MSA2P36157 363 aa7.14□□□□□ -1.27
YKR040CYKR040C MPC3P53311 146 aa7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms