RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W AIM11P87275 137 aa2.56□□□□□ -2
PTM1YKL039W COX12Q01519 83 aa2.56□□□□□ -2
PTM1YKL039W COF1Q03048 143 aaKnown RBP2.56□□□□□ -2
PTM1YKL039W ENV10Q99382 181 aa2.56□□□□□ -2
PTM1YKL039W Q0255P03881 472 aa2.55□□□□□ -2
PTM1YKL039W PHO85P17157 305 aa2.55□□□□□ -2
PTM1YKL039W YHL042WP38729 150 aa2.55□□□□□ -2
PTM1YKL039W DSE2P38844 325 aa2.55□□□□□ -2
PTM1YKL039W CWP2P43497 92 aa2.55□□□□□ -2
PTM1YKL039W IMP2P46972 177 aa2.55□□□□□ -2
PTM1YKL039W YMR105W-AQ8TGS8 64 aa2.55□□□□□ -2
PTM1YKL039W YHR139C-AO13536 103 aa2.54□□□□□ -2
PTM1YKL039W YEL067CP39978 195 aa2.54□□□□□ -2
PTM1YKL039W PEX17P40155 199 aa2.54□□□□□ -2
PTM1YKL039W YBL112CQ3E7Y4 105 aa2.54□□□□□ -2
PTM1YKL039W ECM12O13529 151 aa2.53□□□□□ -2
PTM1YKL039W RPL39P04650 51 aa2.53□□□□□ -2
PTM1YKL039W PBI2P0CT04 75 aaKnown RBP2.53□□□□□ -2
PTM1YKL039W MRPL38P35996 138 aaPredicted RBP2.53□□□□□ -2
PTM1YKL039W NRG2P38082 220 aa2.53□□□□□ -2
PTM1YKL039W GLE2P40066 365 aa2.53□□□□□ -2
PTM1YKL039W POR2P40478 281 aa2.53□□□□□ -2
PTM1YKL039W AIM34Q03673 198 aa2.53□□□□□ -2
PTM1YKL039W IRC23Q08416 157 aa2.53□□□□□ -2
PTM1YKL039W YDL022C-AP0C5L6 82 aa2.53□□□□□ -2.01
PTM1YKL039W ATP15P21306 62 aa2.53□□□□□ -2.01
PTM1YKL039W YKR045CP36138 183 aa2.53□□□□□ -2.01
PTM1YKL039W AIM19P40502 157 aa2.53□□□□□ -2.01
PTM1YKL039W DCV1P43595 202 aa2.53□□□□□ -2.01
PTM1YKL039W YJL027CP47063 138 aaPredicted RBP2.53□□□□□ -2.01
PTM1YKL039W KNH1P50112 268 aa2.53□□□□□ -2.01
PTM1YKL039W YGR219WP53307 113 aa2.53□□□□□ -2.01
PTM1YKL039W EMC6Q12431 108 aa2.53□□□□□ -2.01
PTM1YKL039W YPL229WQ99395 206 aa2.53□□□□□ -2.01
PTM1YKL039W RPL28P02406 149 aaKnown RBP2.52□□□□□ -2.01
PTM1YKL039W QCR8P08525 94 aa2.52□□□□□ -2.01
PTM1YKL039W TOM6P33448 61 aa2.52□□□□□ -2.01
PTM1YKL039W MIC12P38341 106 aa2.52□□□□□ -2.01
PTM1YKL039W CTR2P38865 189 aa2.52□□□□□ -2.01
PTM1YKL039W VTC1P40046 129 aaRIP-Chip data2.52□□□□□ -2.01not detected
PTM1YKL039W VPS55P47111 140 aa2.52□□□□□ -2.01
PTM1YKL039W SHH4Q06236 168 aa2.52□□□□□ -2.01
PTM1YKL039W YOL160WQ08321 113 aa2.52□□□□□ -2.01
PTM1YKL039W YDR029WQ12111 104 aa2.52□□□□□ -2.01
PTM1YKL039W YOR029WQ12243 111 aa2.52□□□□□ -2.01
PTM1YKL039W YDR119W-AQ2V2P9 66 aa2.52□□□□□ -2.01
PTM1YKL039W RPL26AP05743 127 aaKnown RBP2.51□□□□□ -2.01
PTM1YKL039W HUR1P45820 110 aa2.51□□□□□ -2.01
PTM1YKL039W RPL26BP53221 127 aaKnown RBP2.51□□□□□ -2.01
PTM1YKL039W YOR268CQ08734 132 aa2.51□□□□□ -2.01
PTM1YKL039W YPL038W-AQ3E7B4 63 aa2.51□□□□□ -2.01
PTM1YKL039W SHU1P38751 150 aa2.5□□□□□ -2.01
PTM1YKL039W YJR146WP47174 117 aa2.5□□□□□ -2.01
PTM1YKL039W YDR381C-AQ3E6R5 114 aa2.5□□□□□ -2.01
PTM1YKL039W RPS28BP0C0X0 67 aaKnown RBP2.49□□□□□ -2.01
PTM1YKL039W MPC2P38857 129 aa2.49□□□□□ -2.01
PTM1YKL039W RDS3Q06835 107 aaPredicted RBP2.49□□□□□ -2.01
PTM1YKL039W RPS28AQ3E7X9 67 aaPredicted RBP2.49□□□□□ -2.01
PTM1YKL039W YBR121C-AP0C5L4 52 aa2.49□□□□□ -2.01
PTM1YKL039W UBC5P15732 148 aa2.49□□□□□ -2.01
PTM1YKL039W YSY6P38374 65 aa2.49□□□□□ -2.01
PTM1YKL039W SBH1P52870 82 aa2.49□□□□□ -2.01
PTM1YKL039W MRPS12P53732 153 aa2.49□□□□□ -2.01
PTM1YKL039W YNL190WP53872 204 aa2.49□□□□□ -2.01
PTM1YKL039W CCW12Q12127 133 aa2.49□□□□□ -2.01
PTM1YKL039W YBR200W-AQ3E755 54 aa2.49□□□□□ -2.01
PTM1YKL039W KTI11Q3E840 82 aa2.49□□□□□ -2.01
PTM1YKL039W YER039C-AP0CD97 72 aa2.48□□□□□ -2.01
PTM1YKL039W YBR209WP38311 105 aa2.48□□□□□ -2.01
PTM1YKL039W YHR022CP38763 256 aa2.48□□□□□ -2.01
PTM1YKL039W SVP26P38869 228 aa2.48□□□□□ -2.01
PTM1YKL039W YLR042CQ07990 161 aa2.48□□□□□ -2.01
PTM1YKL039W YOR020W-AQ3E824 90 aa2.48□□□□□ -2.01
PTM1YKL039W RPL2AP0CX45 254 aaKnown RBP2.47□□□□□ -2.01
PTM1YKL039W RPL2BP0CX46 254 aaKnown RBP2.47□□□□□ -2.01
PTM1YKL039W MSA2P36157 363 aa2.47□□□□□ -2.01
PTM1YKL039W YCR050CP25630 102 aa2.46□□□□□ -2.02
PTM1YKL039W YHL018WP38744 120 aaPredicted RBP2.46□□□□□ -2.02
PTM1YKL039W SPG4Q04438 115 aa2.46□□□□□ -2.02
PTM1YKL039W YAR029WP39549 74 aa2.45□□□□□ -2.02
PTM1YKL039W YEL008WP40001 126 aa2.45□□□□□ -2.02
PTM1YKL039W PMP3P87284 55 aa2.45□□□□□ -2.02
PTM1YKL039W YLR285C-AQ3E771 56 aa2.45□□□□□ -2.02
PTM1YKL039W YNL146C-AQ3E7Z1 64 aa2.45□□□□□ -2.02
PTM1YKL039W YJR107C-AP0CT86 78 aa2.44□□□□□ -2.02
PTM1YKL039W AUA1P32450 94 aa2.44□□□□□ -2.02
PTM1YKL039W YER187WP40102 141 aa2.44□□□□□ -2.02
PTM1YKL039W YNL194CP40169 301 aa2.44□□□□□ -2.02
PTM1YKL039W ARC15P40518 154 aaRIP-Chip data2.44□□□□□ -2.02not detected
PTM1YKL039W IRC21Q04772 201 aa2.44□□□□□ -2.02
PTM1YKL039W YOR011W-AQ3E807 68 aa2.44□□□□□ -2.02
PTM1YKL039W YRA2P36036 203 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
PTM1YKL039W ERG28P40030 148 aa2.44□□□□□ -2.02
PTM1YKL039W YER135CP40082 130 aa2.44□□□□□ -2.02
PTM1YKL039W YKL183C-AQ3E765 70 aa2.44□□□□□ -2.02
PTM1YKL039W BET1P22804 142 aa2.43□□□□□ -2.02
PTM1YKL039W YGR025WP53216 100 aa2.43□□□□□ -2.02
PTM1YKL039W TSC3Q3E790 80 aa2.43□□□□□ -2.02
PTM1YKL039W YLR236CA0A023PZG4 107 aa2.42□□□□□ -2.02
PTM1YKL039W YHR212W-AP0CX91 67 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms