RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W PAU4P53427 120 aa1.14□□□□□ -2.23
SNX4YJL036W YSP2Q06681 1438 aa1.13□□□□□ -2.23
SNX4YJL036W RIM15P43565 1770 aa1.12□□□□□ -2.23
SNX4YJL036W SCP1Q08873 200 aa1.12□□□□□ -2.23
SNX4YJL036W YRF1-2P40105 1681 aa1.12□□□□□ -2.23
SNX4YJL036W NHP2P32495 156 aaPredicted RBP1.1□□□□□ -2.23
SNX4YJL036W BSC4P53841 131 aa1.1□□□□□ -2.23
SNX4YJL036W YMR175W-AQ3E766 64 aa1.1□□□□□ -2.23
SNX4YJL036W TY1B-BLQ12490 1755 aa1.1□□□□□ -2.23
SNX4YJL036W DNF3Q12674 1656 aa1.09□□□□□ -2.24
SNX4YJL036W TY1B-BRQ12193 1756 aa1.08□□□□□ -2.24
SNX4YJL036W BLM10P43583 2143 aa1.08□□□□□ -2.24
SNX4YJL036W SNF2P22082 1703 aa1.06□□□□□ -2.24
SNX4YJL036W YNL042W-BQ3E7Z2 85 aa1.06□□□□□ -2.24
SNX4YJL036W PDX3P38075 228 aaKnown RBP1.05□□□□□ -2.24
SNX4YJL036W YOR343CQ12484 108 aa1.04□□□□□ -2.24
SNX4YJL036W YOL164W-AQ3E7A5 60 aa1.04□□□□□ -2.24
SNX4YJL036W Q0032Q9ZZX7 96 aa1.03□□□□□ -2.24
SNX4YJL036W ESP1Q03018 1630 aa1.03□□□□□ -2.24
SNX4YJL036W COX7P10174 60 aa1.02□□□□□ -2.25
SNX4YJL036W RPA12P32529 125 aaKnown RBP1.02□□□□□ -2.25
SNX4YJL036W YNL190WP53872 204 aa1.02□□□□□ -2.25
SNX4YJL036W RPC10P40422 70 aa1.01□□□□□ -2.25
SNX4YJL036W FAS2P19097 1887 aaKnown RBP1.01□□□□□ -2.25
SNX4YJL036W RPS29BP41058 56 aaKnown RBP1□□□□□ -2.25
SNX4YJL036W YBR201C-AQ2V2Q3 67 aa1□□□□□ -2.25
SNX4YJL036W YMR122W-AQ3E842 84 aa1□□□□□ -2.25
SNX4YJL036W ECM29P38737 1868 aa1□□□□□ -2.25
SNX4YJL036W TY1B-DR6P0C2I3 1755 aa1□□□□□ -2.25
SNX4YJL036W TY1B-LR2P0C2I5 1755 aa1□□□□□ -2.25
SNX4YJL036W TY1B-PR3P0C2J1 1755 aaKnown RBP1□□□□□ -2.25
SNX4YJL036W TY1B-JR2P47100 1755 aaKnown RBP1□□□□□ -2.25
SNX4YJL036W TY1B-MR1Q04214 1755 aa1□□□□□ -2.25
SNX4YJL036W TY1B-MR2Q04670 1755 aaKnown RBP1□□□□□ -2.25
SNX4YJL036W TY1B-NL1Q12112 1755 aa1□□□□□ -2.25
SNX4YJL036W TY1B-GR1Q12141 1755 aa1□□□□□ -2.25
SNX4YJL036W TY1B-GR3Q12316 1755 aa1□□□□□ -2.25
SNX4YJL036W TY1B-PLQ12414 1755 aaKnown RBP1□□□□□ -2.25
SNX4YJL036W TY1B-ORQ92393 1755 aa1□□□□□ -2.25
SNX4YJL036W TY1B-PR2P0C2J0 1756 aa0.99□□□□□ -2.25
SNX4YJL036W YCR085WP25650 117 aa0.99□□□□□ -2.25
SNX4YJL036W CWP2P43497 92 aa0.99□□□□□ -2.25
SNX4YJL036W RPL38P49167 78 aaKnown RBP0.99□□□□□ -2.25
SNX4YJL036W POC4Q12245 148 aaPredicted RBP0.99□□□□□ -2.25
SNX4YJL036W MOT1P32333 1867 aa0.99□□□□□ -2.25
SNX4YJL036W YAL065CO13511 128 aa0.98□□□□□ -2.25
SNX4YJL036W FPR2P32472 135 aa0.98□□□□□ -2.25
SNX4YJL036W YHR214C-DP0CX93 97 aa0.97□□□□□ -2.25
SNX4YJL036W PAU23Q07987 124 aa0.97□□□□□ -2.25
SNX4YJL036W PAU17Q12370 124 aa0.97□□□□□ -2.25
SNX4YJL036W TY1B-LR3P0C2I6 1755 aaKnown RBP0.96□□□□□ -2.26
SNX4YJL036W XRN1P22147 1528 aaKnown RBP0.96□□□□□ -2.26
SNX4YJL036W TOM6P33448 61 aa0.96□□□□□ -2.26
SNX4YJL036W YNL198CP40166 100 aa0.96□□□□□ -2.26
SNX4YJL036W MMS22Q06164 1454 aa0.95□□□□□ -2.26
SNX4YJL036W YKL068W-AQ3E826 78 aa0.95□□□□□ -2.26
SNX4YJL036W UTP10P42945 1769 aaKnown RBP0.94□□□□□ -2.26
SNX4YJL036W ATP18P81450 59 aa0.94□□□□□ -2.26
SNX4YJL036W NOP10Q6Q547 58 aaPredicted RBP0.94□□□□□ -2.26
SNX4YJL036W MLP1Q02455 1875 aaKnown RBP0.94□□□□□ -2.26
SNX4YJL036W YKL065W-AQ2V2P2 73 aa0.92□□□□□ -2.26
SNX4YJL036W YJR107C-AP0CT86 78 aa0.91□□□□□ -2.26
SNX4YJL036W YOR105WQ08504 108 aa0.91□□□□□ -2.26
SNX4YJL036W YPR145C-AQ2V2P0 78 aa0.91□□□□□ -2.26
SNX4YJL036W YIL156W-BQ2V2P4 73 aa0.91□□□□□ -2.26
SNX4YJL036W STT4P37297 1900 aa0.9□□□□□ -2.27
SNX4YJL036W YOR314WQ12506 109 aa0.9□□□□□ -2.27
SNX4YJL036W YDR381C-AQ3E6R5 114 aa0.9□□□□□ -2.27
SNX4YJL036W TY1B-DR5P0C2I2 1755 aa0.89□□□□□ -2.27
SNX4YJL036W TY1B-PR1P0C2I9 1755 aaKnown RBP0.89□□□□□ -2.27
SNX4YJL036W TY1B-JR1P47098 1755 aa0.89□□□□□ -2.27
SNX4YJL036W TY1B-ML2Q03434 1755 aaKnown RBP0.89□□□□□ -2.27
SNX4YJL036W TY1B-ER1Q03612 1755 aa0.89□□□□□ -2.27
SNX4YJL036W TY1B-ER2Q03619 1755 aa0.89□□□□□ -2.27
SNX4YJL036W TY1B-DR1Q03855 1755 aa0.89□□□□□ -2.27
SNX4YJL036W TY1B-ML1Q04711 1755 aaKnown RBP0.89□□□□□ -2.27
SNX4YJL036W TY1B-LR1Q12088 1755 aaKnown RBP0.89□□□□□ -2.27
SNX4YJL036W TY1B-GR2Q12269 1755 aa0.89□□□□□ -2.27
SNX4YJL036W TY1B-OLQ12273 1755 aa0.89□□□□□ -2.27
SNX4YJL036W TY1B-DR3Q99231 1755 aa0.89□□□□□ -2.27
SNX4YJL036W YBR016WP38216 128 aa0.88□□□□□ -2.27
SNX4YJL036W SDH6Q3E785 79 aa0.88□□□□□ -2.27
SNX4YJL036W HKR1P41809 1802 aa0.87□□□□□ -2.27
SNX4YJL036W YOL097W-AQ3E7Y9 61 aa0.86□□□□□ -2.27
SNX4YJL036W YFR009W-AP0C5M9 85 aa0.84□□□□□ -2.27
SNX4YJL036W TY1B-NL2Q99337 1749 aaKnown RBP0.84□□□□□ -2.28
SNX4YJL036W TAO3P40468 2376 aa0.83□□□□□ -2.28
SNX4YJL036W SWM2P40342 146 aa0.83□□□□□ -2.28
SNX4YJL036W SGF11Q03067 99 aa0.83□□□□□ -2.28
SNX4YJL036W SIN3P22579 1536 aa0.83□□□□□ -2.28
SNX4YJL036W ATX1P38636 73 aa0.82□□□□□ -2.28
SNX4YJL036W YPR108W-AQ3E7B3 70 aa0.82□□□□□ -2.28
SNX4YJL036W YGR121W-AQ3E816 71 aa0.82□□□□□ -2.28
SNX4YJL036W TY2B-CP25384 1770 aa0.82□□□□□ -2.28
SNX4YJL036W TY2B-DR1Q12472 1770 aa0.82□□□□□ -2.28
SNX4YJL036W YDL022C-AP0C5L6 82 aa0.81□□□□□ -2.28
SNX4YJL036W YDR119W-AQ2V2P9 66 aa0.81□□□□□ -2.28
SNX4YJL036W YBR032WP38223 100 aa0.8□□□□□ -2.28
SNX4YJL036W QCR9P22289 66 aa0.79□□□□□ -2.28
SNX4YJL036W EDC1P53080 175 aaPredicted RBP0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms