RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C COX14P39103 70 aa2.23□□□□□ -2.05
SGN1YIR001C EDC2P40023 145 aaPredicted RBP2.23□□□□□ -2.05
SGN1YIR001C HTL1Q9URQ5 78 aa2.23□□□□□ -2.05
SGN1YIR001C ADH1P00330 348 aaKnown RBP2.22□□□□□ -2.05
SGN1YIR001C YER039C-AP0CD97 72 aa2.22□□□□□ -2.05
SGN1YIR001C SCM4P32564 187 aa2.22□□□□□ -2.05
SGN1YIR001C IGD1P43598 195 aa2.22□□□□□ -2.05
SGN1YIR001C VMA21P41806 77 aa2.21□□□□□ -2.06
SGN1YIR001C SPG1P50088 95 aa2.21□□□□□ -2.06
SGN1YIR001C ATP16Q12165 160 aa2.21□□□□□ -2.06
SGN1YIR001C YCR024C-BQ3E7Z8 88 aa2.21□□□□□ -2.06
SGN1YIR001C GSP1P32835 219 aaKnown RBP2.2□□□□□ -2.06
SGN1YIR001C MRPL24P36525 258 aaPredicted RBP2.2□□□□□ -2.06
SGN1YIR001C YGL118CP53132 145 aa2.2□□□□□ -2.06
SGN1YIR001C DDR2P89113 61 aa2.2□□□□□ -2.06
SGN1YIR001C YML079WQ03629 201 aa2.2□□□□□ -2.06
SGN1YIR001C COA3Q3E7B2 85 aa2.2□□□□□ -2.06
SGN1YIR001C MBF1O14467 151 aaKnown RBP2.19□□□□□ -2.06
SGN1YIR001C QCR8P08525 94 aa2.19□□□□□ -2.06
SGN1YIR001C ATG8P38182 117 aaRIP-Chip data2.19□□□□□ -2.06not detected
SGN1YIR001C YJR085CP47131 105 aaKnown RBP2.19□□□□□ -2.06
SGN1YIR001C YGR121W-AQ3E816 71 aa2.19□□□□□ -2.06
SGN1YIR001C RPL27BP0C2H7 136 aaKnown RBP2.18□□□□□ -2.06
SGN1YIR001C RPL18AP0CX49 186 aaKnown RBP2.18□□□□□ -2.06
SGN1YIR001C RPL18BP0CX50 186 aaKnown RBP2.18□□□□□ -2.06
SGN1YIR001C KRE1P17260 313 aa2.18□□□□□ -2.06
SGN1YIR001C PEX17P40155 199 aa2.18□□□□□ -2.06
SGN1YIR001C HAP3P13434 144 aa2.17□□□□□ -2.06
SGN1YIR001C COX10P21592 462 aa2.17□□□□□ -2.06
SGN1YIR001C YMR103CQ04436 120 aa2.17□□□□□ -2.06
SGN1YIR001C YPL257WQ08974 193 aa2.17□□□□□ -2.06
SGN1YIR001C YKL023C-AQ2V2P3 75 aa2.17□□□□□ -2.06
SGN1YIR001C YLL006W-AQ3E814 58 aa2.17□□□□□ -2.06
SGN1YIR001C RPL26AP05743 127 aaKnown RBP2.16□□□□□ -2.06
SGN1YIR001C RPL29P05747 59 aaPredicted RBP2.16□□□□□ -2.06
SGN1YIR001C RPL26BP53221 127 aaKnown RBP2.16□□□□□ -2.06
SGN1YIR001C AIM11P87275 137 aa2.16□□□□□ -2.06
SGN1YIR001C HPA2Q06592 156 aa2.16□□□□□ -2.06
SGN1YIR001C YPL261CQ08976 102 aa2.16□□□□□ -2.06
SGN1YIR001C YAL063C-AQ3E791 96 aa2.16□□□□□ -2.06
SGN1YIR001C SPT4P32914 102 aaPredicted RBP2.15□□□□□ -2.07
SGN1YIR001C YHL018WP38744 120 aaPredicted RBP2.15□□□□□ -2.07
SGN1YIR001C POP3P53833 195 aaPredicted RBP2.15□□□□□ -2.07
SGN1YIR001C YNL190WP53872 204 aa2.15□□□□□ -2.07
SGN1YIR001C CYT2Q00873 224 aa2.15□□□□□ -2.07
SGN1YIR001C YOR020W-AQ3E824 90 aa2.15□□□□□ -2.07
SGN1YIR001C GSP2P32836 220 aaKnown RBP2.14□□□□□ -2.07
SGN1YIR001C ZEO1Q08245 113 aa2.14□□□□□ -2.07
SGN1YIR001C YNL042W-BQ3E7Z2 85 aa2.14□□□□□ -2.07
SGN1YIR001C RPL28P02406 149 aaKnown RBP2.13□□□□□ -2.07
SGN1YIR001C UGX2P32772 223 aa2.13□□□□□ -2.07
SGN1YIR001C BSC4P53841 131 aa2.13□□□□□ -2.07
SGN1YIR001C ATP5P09457 212 aa2.12□□□□□ -2.07
SGN1YIR001C YKR041WP36134 250 aa2.12□□□□□ -2.07
SGN1YIR001C MRPL11P36521 249 aaPredicted RBP2.12□□□□□ -2.07
SGN1YIR001C FYV4P38783 130 aaPredicted RBP2.12□□□□□ -2.07
SGN1YIR001C YER134CP40081 178 aa2.12□□□□□ -2.07
SGN1YIR001C YPL073CP40323 161 aa2.12□□□□□ -2.07
SGN1YIR001C NSE4P43124 402 aa2.12□□□□□ -2.07
SGN1YIR001C RPL37BP51402 88 aaKnown RBP2.12□□□□□ -2.07
SGN1YIR001C YHR007C-AQ07074 71 aa2.12□□□□□ -2.07
SGN1YIR001C YJL127C-BQ3E828 52 aa2.12□□□□□ -2.07
SGN1YIR001C YDL022C-AP0C5L6 82 aa2.11□□□□□ -2.07
SGN1YIR001C HHO1P53551 258 aa2.11□□□□□ -2.07
SGN1YIR001C MRPS12P53732 153 aa2.11□□□□□ -2.07
SGN1YIR001C PAU17Q12370 124 aa2.11□□□□□ -2.07
SGN1YIR001C YBR230W-AQ3E762 66 aa2.11□□□□□ -2.07
SGN1YIR001C YLR236CA0A023PZG4 107 aa2.1□□□□□ -2.07
SGN1YIR001C FYV5P25585 152 aa2.1□□□□□ -2.07
SGN1YIR001C YBR027CP38220 110 aa2.1□□□□□ -2.07
SGN1YIR001C YHL005CP38752 130 aa2.1□□□□□ -2.07
SGN1YIR001C COX7P10174 60 aa2.09□□□□□ -2.07
SGN1YIR001C ICY1Q04329 127 aa2.09□□□□□ -2.07
SGN1YIR001C YOR072WQ08486 104 aa2.09□□□□□ -2.07
SGN1YIR001C IGO2Q9P305 131 aa2.09□□□□□ -2.07
SGN1YIR001C YHR139C-AO13536 103 aa2.08□□□□□ -2.08
SGN1YIR001C YIA6P40556 373 aa2.08□□□□□ -2.08
SGN1YIR001C GTT1P40582 234 aa2.08□□□□□ -2.08
SGN1YIR001C YNL122CP53921 115 aaPredicted RBP2.08□□□□□ -2.08
SGN1YIR001C IRC21Q04772 201 aa2.08□□□□□ -2.08
SGN1YIR001C YLR050CQ12155 161 aaKnown RBP2.08□□□□□ -2.08
SGN1YIR001C BET1P22804 142 aa2.07□□□□□ -2.08
SGN1YIR001C MID2P36027 376 aa2.07□□□□□ -2.08
SGN1YIR001C YEL067CP39978 195 aa2.07□□□□□ -2.08
SGN1YIR001C SCS22Q6Q595 175 aa2.07□□□□□ -2.08
SGN1YIR001C RPL36BO14455 100 aaKnown RBP2.06□□□□□ -2.08
SGN1YIR001C RGM1Q00453 211 aa2.06□□□□□ -2.08
SGN1YIR001C ARL3Q02804 198 aa2.05□□□□□ -2.08
SGN1YIR001C YKL044WP36092 106 aa2.04□□□□□ -2.08
SGN1YIR001C MSA2P36157 363 aa2.04□□□□□ -2.08
SGN1YIR001C YNR077CP53758 84 aa2.04□□□□□ -2.08
SGN1YIR001C YNL184CP53876 108 aa2.04□□□□□ -2.08
SGN1YIR001C CNL1Q06333 122 aa2.04□□□□□ -2.08
SGN1YIR001C PAU23Q07987 124 aa2.04□□□□□ -2.08
SGN1YIR001C MRPL44P19956 98 aa2.03□□□□□ -2.08
SGN1YIR001C YFR057WP43625 151 aa2.03□□□□□ -2.08
SGN1YIR001C SFT1P43682 97 aa2.03□□□□□ -2.08
SGN1YIR001C FYV7Q12247 151 aa2.03□□□□□ -2.08
SGN1YIR001C YLR157W-DP0CE99 70 aa2.02□□□□□ -2.09
SGN1YIR001C YHR130CP38834 111 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms