RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C AIM11P87275 137 aa4.39□□□□□ -1.71
PUP2YGR253C MBF1O14467 151 aaKnown RBP4.38□□□□□ -1.71
PUP2YGR253C RPL18AP0CX49 186 aaKnown RBP4.38□□□□□ -1.71
PUP2YGR253C RPL18BP0CX50 186 aaKnown RBP4.38□□□□□ -1.71
PUP2YGR253C CPR1P14832 162 aaKnown RBP4.38□□□□□ -1.71
PUP2YGR253C PEX17P40155 199 aa4.38□□□□□ -1.71
PUP2YGR253C POP3P53833 195 aaPredicted RBP4.38□□□□□ -1.71
PUP2YGR253C YML079WQ03629 201 aa4.37□□□□□ -1.71
PUP2YGR253C YKL023C-AQ2V2P3 75 aa4.37□□□□□ -1.71
PUP2YGR253C YLL006W-AQ3E814 58 aa4.37□□□□□ -1.71
PUP2YGR253C QCR8P08525 94 aa4.36□□□□□ -1.71
PUP2YGR253C YER134CP40081 178 aa4.36□□□□□ -1.71
PUP2YGR253C SPG1P50088 95 aa4.36□□□□□ -1.71
PUP2YGR253C KSH1Q8TGJ3 72 aa4.36□□□□□ -1.71
PUP2YGR253C FYV4P38783 130 aaPredicted RBP4.35□□□□□ -1.71
PUP2YGR253C ZEO1Q08245 113 aa4.35□□□□□ -1.71
PUP2YGR253C YJR085CP47131 105 aaKnown RBP4.34□□□□□ -1.71
PUP2YGR253C HHO1P53551 258 aa4.34□□□□□ -1.71
PUP2YGR253C DDR2P89113 61 aa4.34□□□□□ -1.71
PUP2YGR253C YPL261CQ08976 102 aa4.34□□□□□ -1.71
PUP2YGR253C YGR121W-AQ3E816 71 aa4.33□□□□□ -1.72
PUP2YGR253C RPL28P02406 149 aaKnown RBP4.32□□□□□ -1.72
PUP2YGR253C RPL29P05747 59 aaPredicted RBP4.32□□□□□ -1.72
PUP2YGR253C YDL022C-AP0C5L6 82 aa4.32□□□□□ -1.72
PUP2YGR253C HAP3P13434 144 aa4.32□□□□□ -1.72
PUP2YGR253C KRE1P17260 313 aa4.32□□□□□ -1.72
PUP2YGR253C MRPL33P20084 86 aa4.32□□□□□ -1.72
PUP2YGR253C MRPS12P53732 153 aa4.32□□□□□ -1.72
PUP2YGR253C YKR041WP36134 250 aa4.31□□□□□ -1.72
PUP2YGR253C YPL257WQ08974 193 aa4.31□□□□□ -1.72
PUP2YGR253C YNL162W-AQ3E7A8 72 aa4.31□□□□□ -1.72
PUP2YGR253C HOT13P36078 116 aa4.3□□□□□ -1.72
PUP2YGR253C UBC11P52492 156 aa4.3□□□□□ -1.72
PUP2YGR253C GTT1P40582 234 aa4.29□□□□□ -1.72
PUP2YGR253C HPA2Q06592 156 aa4.29□□□□□ -1.72
PUP2YGR253C MRPL11P36521 249 aaPredicted RBP4.28□□□□□ -1.72
PUP2YGR253C YNL190WP53872 204 aa4.28□□□□□ -1.72
PUP2YGR253C YNL042W-BQ3E7Z2 85 aa4.28□□□□□ -1.72
PUP2YGR253C RPL26AP05743 127 aaKnown RBP4.27□□□□□ -1.73
PUP2YGR253C SPT4P32914 102 aaPredicted RBP4.27□□□□□ -1.73
PUP2YGR253C MRPL24P36525 258 aaPredicted RBP4.27□□□□□ -1.73
PUP2YGR253C RPL26BP53221 127 aaKnown RBP4.27□□□□□ -1.73
PUP2YGR253C YOR020W-AQ3E824 90 aa4.27□□□□□ -1.73
PUP2YGR253C COX10P21592 462 aa4.25□□□□□ -1.73
PUP2YGR253C YCR007CP25354 239 aa4.25□□□□□ -1.73
PUP2YGR253C UGX2P32772 223 aa4.25□□□□□ -1.73
PUP2YGR253C ATP5P09457 212 aa4.24□□□□□ -1.73
PUP2YGR253C YPL073CP40323 161 aa4.24□□□□□ -1.73
PUP2YGR253C BSC4P53841 131 aa4.24□□□□□ -1.73
PUP2YGR253C ARL3Q02804 198 aa4.24□□□□□ -1.73
PUP2YGR253C YBR230W-AQ3E762 66 aa4.23□□□□□ -1.73
PUP2YGR253C YEL067CP39978 195 aa4.22□□□□□ -1.73
PUP2YGR253C YLR050CQ12155 161 aaKnown RBP4.22□□□□□ -1.73
PUP2YGR253C YJL127C-BQ3E828 52 aa4.22□□□□□ -1.73
PUP2YGR253C YHR007C-AQ07074 71 aa4.21□□□□□ -1.74
PUP2YGR253C PAU17Q12370 124 aa4.21□□□□□ -1.74
PUP2YGR253C YAL063C-AQ3E791 96 aa4.21□□□□□ -1.74
PUP2YGR253C YMR230W-AQ3E7B5 62 aa4.21□□□□□ -1.74
PUP2YGR253C SCS22Q6Q595 175 aa4.21□□□□□ -1.74
PUP2YGR253C IGO2Q9P305 131 aa4.21□□□□□ -1.74
PUP2YGR253C IRC21Q04772 201 aa4.2□□□□□ -1.74
PUP2YGR253C YBR027CP38220 110 aa4.19□□□□□ -1.74
PUP2YGR253C YNR077CP53758 84 aa4.19□□□□□ -1.74
PUP2YGR253C ICY1Q04329 127 aa4.19□□□□□ -1.74
PUP2YGR253C MID2P36027 376 aa4.18□□□□□ -1.74
PUP2YGR253C YHL018WP38744 120 aaPredicted RBP4.18□□□□□ -1.74
PUP2YGR253C RPL37BP51402 88 aaKnown RBP4.18□□□□□ -1.74
PUP2YGR253C YLR236CA0A023PZG4 107 aa4.17□□□□□ -1.74
PUP2YGR253C FYV5P25585 152 aa4.17□□□□□ -1.74
PUP2YGR253C DUT1P33317 147 aa4.17□□□□□ -1.74
PUP2YGR253C YKL044WP36092 106 aa4.17□□□□□ -1.74
PUP2YGR253C YIA6P40556 373 aa4.17□□□□□ -1.74
PUP2YGR253C RGM1Q00453 211 aa4.16□□□□□ -1.74
PUP2YGR253C YOR072WQ08486 104 aa4.16□□□□□ -1.74
PUP2YGR253C MRPL44P19956 98 aa4.15□□□□□ -1.75
PUP2YGR253C YFR057WP43625 151 aa4.15□□□□□ -1.75
PUP2YGR253C CNL1Q06333 122 aa4.15□□□□□ -1.75
PUP2YGR253C YHL005CP38752 130 aa4.14□□□□□ -1.75
PUP2YGR253C SEC11P15367 167 aa4.12□□□□□ -1.75
PUP2YGR253C BET1P22804 142 aa4.11□□□□□ -1.75
PUP2YGR253C CUE4Q04201 117 aaPredicted RBP4.11□□□□□ -1.75
PUP2YGR253C YHR139C-AO13536 103 aa4.1□□□□□ -1.75
PUP2YGR253C RPL36BO14455 100 aaKnown RBP4.1□□□□□ -1.75
PUP2YGR253C YOR034C-AQ3E735 80 aa4.1□□□□□ -1.75
PUP2YGR253C MSL1P40567 111 aaPredicted RBP4.09□□□□□ -1.75
PUP2YGR253C YNL122CP53921 115 aaPredicted RBP4.09□□□□□ -1.75
PUP2YGR253C SSS1P35179 80 aa4.08□□□□□ -1.76
PUP2YGR253C YGL230CP53074 147 aa4.08□□□□□ -1.76
PUP2YGR253C YNL184CP53876 108 aa4.08□□□□□ -1.76
PUP2YGR253C SEN15Q04675 128 aa4.08□□□□□ -1.76
PUP2YGR253C YIL134C-AQ45U18 67 aa4.08□□□□□ -1.76
PUP2YGR253C PAU23Q07987 124 aa4.07□□□□□ -1.76
PUP2YGR253C COX7P10174 60 aa4.06□□□□□ -1.76
PUP2YGR253C YHR130CP38834 111 aa4.05□□□□□ -1.76
PUP2YGR253C YDL157CQ12082 118 aa4.05□□□□□ -1.76
PUP2YGR253C SFT1P43682 97 aa4.03□□□□□ -1.76
PUP2YGR253C MSA2P36157 363 aa4.02□□□□□ -1.77
PUP2YGR253C MPC3P53311 146 aa4.02□□□□□ -1.77
PUP2YGR253C YEL045CP32616 141 aa4□□□□□ -1.77
PUP2YGR253C COA6Q3E846 104 aa4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms