RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W AIM11P87275 137 aa5.39□□□□□ -1.55
CPD1YGR247W KSH1Q8TGJ3 72 aa5.39□□□□□ -1.55
CPD1YGR247W QCR8P08525 94 aa5.38□□□□□ -1.55
CPD1YGR247W GSP2P32836 220 aaKnown RBP5.38□□□□□ -1.55
CPD1YGR247W YJR085CP47131 105 aaKnown RBP5.38□□□□□ -1.55
CPD1YGR247W YMR103CQ04436 120 aa5.38□□□□□ -1.55
CPD1YGR247W RPL18AP0CX49 186 aaKnown RBP5.37□□□□□ -1.55
CPD1YGR247W RPL18BP0CX50 186 aaKnown RBP5.37□□□□□ -1.55
CPD1YGR247W CYT2Q00873 224 aa5.37□□□□□ -1.55
CPD1YGR247W YML079WQ03629 201 aa5.36□□□□□ -1.55
CPD1YGR247W YLL006W-AQ3E814 58 aa5.36□□□□□ -1.55
CPD1YGR247W YGR121W-AQ3E816 71 aa5.36□□□□□ -1.55
CPD1YGR247W RPL29P05747 59 aaPredicted RBP5.35□□□□□ -1.55
CPD1YGR247W POP3P53833 195 aaPredicted RBP5.35□□□□□ -1.55
CPD1YGR247W HAP3P13434 144 aa5.33□□□□□ -1.56
CPD1YGR247W DDR2P89113 61 aa5.33□□□□□ -1.56
CPD1YGR247W KRE1P17260 313 aa5.32□□□□□ -1.56
CPD1YGR247W NSE4P43124 402 aa5.31□□□□□ -1.56
CPD1YGR247W YNL162W-AQ3E7A8 72 aa5.31□□□□□ -1.56
CPD1YGR247W YER134CP40081 178 aa5.3□□□□□ -1.56
CPD1YGR247W YNL190WP53872 204 aa5.3□□□□□ -1.56
CPD1YGR247W ZEO1Q08245 113 aa5.3□□□□□ -1.56
CPD1YGR247W YPL257WQ08974 193 aa5.3□□□□□ -1.56
CPD1YGR247W YPL261CQ08976 102 aa5.3□□□□□ -1.56
CPD1YGR247W FYV4P38783 130 aaPredicted RBP5.29□□□□□ -1.56
CPD1YGR247W UBC11P52492 156 aa5.29□□□□□ -1.56
CPD1YGR247W YDL022C-AP0C5L6 82 aa5.28□□□□□ -1.56
CPD1YGR247W MRPL33P20084 86 aa5.28□□□□□ -1.56
CPD1YGR247W SPT4P32914 102 aaPredicted RBP5.28□□□□□ -1.56
CPD1YGR247W MRPL24P36525 258 aaPredicted RBP5.28□□□□□ -1.56
CPD1YGR247W HHO1P53551 258 aa5.28□□□□□ -1.56
CPD1YGR247W MRPS12P53732 153 aa5.28□□□□□ -1.56
CPD1YGR247W YNL042W-BQ3E7Z2 85 aa5.28□□□□□ -1.56
CPD1YGR247W HOT13P36078 116 aa5.27□□□□□ -1.57
CPD1YGR247W YKR041WP36134 250 aa5.27□□□□□ -1.57
CPD1YGR247W HPA2Q06592 156 aa5.27□□□□□ -1.57
CPD1YGR247W RPL28P02406 149 aaKnown RBP5.26□□□□□ -1.57
CPD1YGR247W RPL26AP05743 127 aaKnown RBP5.26□□□□□ -1.57
CPD1YGR247W RPL26BP53221 127 aaKnown RBP5.26□□□□□ -1.57
CPD1YGR247W YOR020W-AQ3E824 90 aa5.26□□□□□ -1.57
CPD1YGR247W MRPL11P36521 249 aaPredicted RBP5.25□□□□□ -1.57
CPD1YGR247W COX10P21592 462 aa5.24□□□□□ -1.57
CPD1YGR247W GTT1P40582 234 aa5.22□□□□□ -1.57
CPD1YGR247W YPL073CP40323 161 aa5.2□□□□□ -1.58
CPD1YGR247W YBR230W-AQ3E762 66 aa5.2□□□□□ -1.58
CPD1YGR247W YAL063C-AQ3E791 96 aa5.2□□□□□ -1.58
CPD1YGR247W ATP5P09457 212 aa5.19□□□□□ -1.58
CPD1YGR247W UGX2P32772 223 aa5.19□□□□□ -1.58
CPD1YGR247W RPL37BP51402 88 aaKnown RBP5.19□□□□□ -1.58
CPD1YGR247W BSC4P53841 131 aa5.19□□□□□ -1.58
CPD1YGR247W YJL127C-BQ3E828 52 aa5.19□□□□□ -1.58
CPD1YGR247W YCR007CP25354 239 aa5.18□□□□□ -1.58
CPD1YGR247W DUT1P33317 147 aa5.18□□□□□ -1.58
CPD1YGR247W YLR050CQ12155 161 aaKnown RBP5.18□□□□□ -1.58
CPD1YGR247W YHL018WP38744 120 aaPredicted RBP5.17□□□□□ -1.58
CPD1YGR247W IGO2Q9P305 131 aa5.17□□□□□ -1.58
CPD1YGR247W PAU17Q12370 124 aa5.16□□□□□ -1.58
CPD1YGR247W ICY1Q04329 127 aa5.15□□□□□ -1.59
CPD1YGR247W FYV5P25585 152 aa5.14□□□□□ -1.59
CPD1YGR247W YBR027CP38220 110 aa5.14□□□□□ -1.59
CPD1YGR247W YEL067CP39978 195 aa5.14□□□□□ -1.59
CPD1YGR247W ARL3Q02804 198 aa5.14□□□□□ -1.59
CPD1YGR247W IRC21Q04772 201 aa5.14□□□□□ -1.59
CPD1YGR247W YHR007C-AQ07074 71 aa5.14□□□□□ -1.59
CPD1YGR247W YMR230W-AQ3E7B5 62 aa5.14□□□□□ -1.59
CPD1YGR247W YLR236CA0A023PZG4 107 aa5.13□□□□□ -1.59
CPD1YGR247W SOH1P38633 127 aa5.13□□□□□ -1.59
CPD1YGR247W YKL044WP36092 106 aa5.12□□□□□ -1.59
CPD1YGR247W YOR072WQ08486 104 aa5.12□□□□□ -1.59
CPD1YGR247W YIA6P40556 373 aa5.11□□□□□ -1.59
CPD1YGR247W RGM1Q00453 211 aa5.11□□□□□ -1.59
CPD1YGR247W YNR077CP53758 84 aa5.1□□□□□ -1.59
CPD1YGR247W CNL1Q06333 122 aa5.1□□□□□ -1.59
CPD1YGR247W YHL005CP38752 130 aa5.09□□□□□ -1.59
CPD1YGR247W SCS22Q6Q595 175 aa5.09□□□□□ -1.59
CPD1YGR247W MID2P36027 376 aa5.07□□□□□ -1.6
CPD1YGR247W MRPL44P19956 98 aa5.06□□□□□ -1.6
CPD1YGR247W YNL122CP53921 115 aaPredicted RBP5.05□□□□□ -1.6
CPD1YGR247W RPL36BO14455 100 aaKnown RBP5.04□□□□□ -1.6
CPD1YGR247W YFR057WP43625 151 aa5.04□□□□□ -1.6
CPD1YGR247W BET1P22804 142 aa5.03□□□□□ -1.6
CPD1YGR247W YHR139C-AO13536 103 aa5.02□□□□□ -1.61
CPD1YGR247W COX7P10174 60 aa5.02□□□□□ -1.61
CPD1YGR247W SEC11P15367 167 aa5.02□□□□□ -1.61
CPD1YGR247W YNL184CP53876 108 aa5.02□□□□□ -1.61
CPD1YGR247W CUE4Q04201 117 aaPredicted RBP5□□□□□ -1.61
CPD1YGR247W PAU23Q07987 124 aa5□□□□□ -1.61
CPD1YGR247W SFT1P43682 97 aa4.99□□□□□ -1.61
CPD1YGR247W MSL1P40567 111 aaPredicted RBP4.97□□□□□ -1.61
CPD1YGR247W YGL230CP53074 147 aa4.97□□□□□ -1.61
CPD1YGR247W YOR034C-AQ3E735 80 aa4.97□□□□□ -1.61
CPD1YGR247W YHR130CP38834 111 aa4.96□□□□□ -1.62
CPD1YGR247W YDL157CQ12082 118 aa4.96□□□□□ -1.62
CPD1YGR247W YEL045CP32616 141 aa4.95□□□□□ -1.62
CPD1YGR247W MSA2P36157 363 aa4.95□□□□□ -1.62
CPD1YGR247W YCR043CP25361 127 aa4.94□□□□□ -1.62
CPD1YGR247W YIL134C-AQ45U18 67 aa4.94□□□□□ -1.62
CPD1YGR247W SSS1P35179 80 aa4.93□□□□□ -1.62
CPD1YGR247W OST2P46964 130 aa4.92□□□□□ -1.62
CPD1YGR247W YLR157W-DP0CE99 70 aa4.9□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms