RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeastyeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL28YGL103W KNH1P50112 268 aa3.71□□□□□ -1.82
RPL28YGL103W ALG13P53178 202 aa3.71□□□□□ -1.82
RPL28YGL103W RGM1Q00453 211 aa3.71□□□□□ -1.82
RPL28YGL103W YDR029WQ12111 104 aa3.71□□□□□ -1.82
RPL28YGL103W YDR119W-AQ2V2P9 66 aa3.71□□□□□ -1.82
RPL28YGL103W RPL2AP0CX45 254 aaKnown RBP3.7□□□□□ -1.82
RPL28YGL103W RPL2BP0CX46 254 aaKnown RBP3.7□□□□□ -1.82
RPL28YGL103W YAR029WP39549 74 aa3.7□□□□□ -1.82
RPL28YGL103W YDL186WP48568 277 aa3.7□□□□□ -1.82
RPL28YGL103W YOR020W-AQ3E824 90 aa3.7□□□□□ -1.82
RPL28YGL103W TAR1Q8TGM6 124 aa3.7□□□□□ -1.82
RPL28YGL103W RPS11AP0CX47 156 aaKnown RBP3.69□□□□□ -1.82
RPL28YGL103W RPS11BP0CX48 156 aaKnown RBP3.69□□□□□ -1.82
RPL28YGL103W UBC5P15732 148 aa3.69□□□□□ -1.82
RPL28YGL103W COX14P39103 70 aa3.69□□□□□ -1.82
RPL28YGL103W RPR2P40571 144 aa3.69□□□□□ -1.82
RPL28YGL103W VAM10Q08474 114 aa3.69□□□□□ -1.82
RPL28YGL103W YLL006W-AQ3E814 58 aa3.69□□□□□ -1.82
RPL28YGL103W MSA2P36157 363 aa3.68□□□□□ -1.82
RPL28YGL103W YCR041WP37265 110 aa3.68□□□□□ -1.82
RPL28YGL103W UBC11P52492 156 aa3.68□□□□□ -1.82
RPL28YGL103W YPS5P53057 165 aa3.68□□□□□ -1.82
RPL28YGL103W ECM12O13529 151 aa3.67□□□□□ -1.82
RPL28YGL103W YLR415CO13578 112 aa3.67□□□□□ -1.82
RPL28YGL103W YJR107C-AP0CT86 78 aa3.67□□□□□ -1.82
RPL28YGL103W HAL1Q01766 294 aa3.67□□□□□ -1.82
RPL28YGL103W Q0297Q9ZZV8 51 aa3.67□□□□□ -1.82
RPL28YGL103W YBR219CP38317 127 aa3.66□□□□□ -1.82
RPL28YGL103W YSY6P38374 65 aa3.66□□□□□ -1.82
RPL28YGL103W YHL018WP38744 120 aaPredicted RBP3.66□□□□□ -1.82
RPL28YGL103W YLR361C-AQ3E795 98 aa3.66□□□□□ -1.82
RPL28YGL103W YPL038W-AQ3E7B4 63 aa3.66□□□□□ -1.82
RPL28YGL103W MPC3P53311 146 aa3.65□□□□□ -1.83
RPL28YGL103W IRC21Q04772 201 aa3.65□□□□□ -1.83
RPL28YGL103W SHH4Q06236 168 aa3.65□□□□□ -1.83
RPL28YGL103W YBR126W-AQ8TGU7 68 aa3.65□□□□□ -1.83
RPL28YGL103W YLR236CA0A023PZG4 107 aa3.64□□□□□ -1.83
RPL28YGL103W TOM6P33448 61 aa3.64□□□□□ -1.83
RPL28YGL103W YLR285C-AQ3E771 56 aa3.64□□□□□ -1.83
RPL28YGL103W YBR056W-AI2HB52 66 aa3.63□□□□□ -1.83
RPL28YGL103W YCR001WP25347 104 aa3.63□□□□□ -1.83
RPL28YGL103W ERI1P62651 68 aaKnown RBP3.63□□□□□ -1.83
RPL28YGL103W ATP18P81450 59 aa3.63□□□□□ -1.83
RPL28YGL103W YLR281CQ05863 155 aa3.63□□□□□ -1.83
RPL28YGL103W TSC3Q3E790 80 aa3.63□□□□□ -1.83
RPL28YGL103W YMR122W-AQ3E842 84 aa3.63□□□□□ -1.83
RPL28YGL103W IRA1P18963 3092 aa3.63□□□□□ -1.83
RPL28YGL103W RPB9P27999 122 aa3.62□□□□□ -1.83
RPL28YGL103W RPL38P49167 78 aaKnown RBP3.62□□□□□ -1.83
RPL28YGL103W SMD1Q02260 146 aaPredicted RBP3.62□□□□□ -1.83
RPL28YGL103W CRC1Q12289 327 aa3.62□□□□□ -1.83
RPL28YGL103W BPH1P25356 2167 aa3.62□□□□□ -1.83
RPL28YGL103W YHR212W-AP0CX91 67 aa3.61□□□□□ -1.83
RPL28YGL103W EDC1P53080 175 aaPredicted RBP3.61□□□□□ -1.83
RPL28YGL103W ICY1Q04329 127 aa3.61□□□□□ -1.83
RPL28YGL103W YMR175W-AQ3E766 64 aa3.61□□□□□ -1.83
RPL28YGL103W YGR240C-AQ3E786 66 aa3.61□□□□□ -1.83
RPL28YGL103W YLR156WP0CE96 114 aa3.6□□□□□ -1.83
RPL28YGL103W YLR159WP0CE97 114 aa3.6□□□□□ -1.83
RPL28YGL103W YLR161WP0CE98 114 aa3.6□□□□□ -1.83
RPL28YGL103W TDA2P40045 126 aa3.6□□□□□ -1.83
RPL28YGL103W YAL065CO13511 128 aa3.59□□□□□ -1.83
RPL28YGL103W RPL26AP05743 127 aaKnown RBP3.59□□□□□ -1.83
RPL28YGL103W YCR050CP25630 102 aa3.59□□□□□ -1.83
RPL28YGL103W MVB12P42939 101 aa3.59□□□□□ -1.83
RPL28YGL103W RPL26BP53221 127 aaKnown RBP3.59□□□□□ -1.83
RPL28YGL103W TOR2P32600 2474 aaKnown RBP3.59□□□□□ -1.84
RPL28YGL103W YER145C-AA0A023PYF4 145 aa3.58□□□□□ -1.84
RPL28YGL103W RPL11AP0C0W9 174 aaKnown RBP3.58□□□□□ -1.84
RPL28YGL103W YBR144CP34215 104 aa3.58□□□□□ -1.84
RPL28YGL103W ERG28P40030 148 aa3.58□□□□□ -1.84
RPL28YGL103W YER187WP40102 141 aa3.58□□□□□ -1.84
RPL28YGL103W RPL29P05747 59 aaPredicted RBP3.57□□□□□ -1.84
RPL28YGL103W AQY2P0CD90 149 aa3.57□□□□□ -1.84
RPL28YGL103W YER039C-AP0CD97 72 aa3.57□□□□□ -1.84
RPL28YGL103W AIM4P38305 123 aaPredicted RBP3.57□□□□□ -1.84
RPL28YGL103W YAL064WP39711 94 aa3.57□□□□□ -1.84
RPL28YGL103W RSM19P53733 91 aaPredicted RBP3.57□□□□□ -1.84
RPL28YGL103W YDR274CP87283 123 aa3.57□□□□□ -1.84
RPL28YGL103W YDL241WQ07738 123 aa3.57□□□□□ -1.84
RPL28YGL103W ATP20Q12233 115 aa3.57□□□□□ -1.84
RPL28YGL103W YBL039W-BP0C268 59 aa3.56□□□□□ -1.84
RPL28YGL103W YFR009W-AP0C5M9 85 aa3.56□□□□□ -1.84
RPL28YGL103W YRA2P36036 203 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
RPL28YGL103W RSM18P40033 138 aa3.56□□□□□ -1.84
RPL28YGL103W YFL019CP43576 117 aa3.56□□□□□ -1.84
RPL28YGL103W YMR320WQ04897 101 aa3.56□□□□□ -1.84
RPL28YGL103W YPR010C-AA5Z2X5 72 aa3.55□□□□□ -1.84
RPL28YGL103W MLF3P32047 452 aa3.55□□□□□ -1.84
RPL28YGL103W RPL11BQ3E757 174 aaPredicted RBP3.55□□□□□ -1.84
RPL28YGL103W YKL183C-AQ3E765 70 aa3.55□□□□□ -1.84
RPL28YGL103W TRA1P38811 3744 aa3.55□□□□□ -1.84
RPL28YGL103W BET1P22804 142 aa3.54□□□□□ -1.84
RPL28YGL103W RPC10P40422 70 aa3.54□□□□□ -1.84
RPL28YGL103W SGF11Q03067 99 aa3.54□□□□□ -1.84
RPL28YGL103W UBC4P15731 148 aa3.53□□□□□ -1.84
RPL28YGL103W YOR314WQ12506 109 aa3.53□□□□□ -1.84
RPL28YGL103W GCN1P33892 2672 aaKnown RBP3.52□□□□□ -1.85
RPL28YGL103W DIF1O13577 133 aa3.52□□□□□ -1.85
RPL28YGL103W FYV5P25585 152 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms