RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeastyeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS23YGL056C YKL044WP36092 106 aa2.32□□□□□ -2.04
SDS23YGL056C YHR140WP38842 239 aa2.32□□□□□ -2.04
SDS23YGL056C YIR020CP40575 100 aa2.32□□□□□ -2.04
SDS23YGL056C YGL230CP53074 147 aa2.32□□□□□ -2.04
SDS23YGL056C YGL193CP53097 103 aa2.32□□□□□ -2.04
SDS23YGL056C NAT5Q08689 176 aa2.32□□□□□ -2.04
SDS23YGL056C YOR381W-AQ3E804 55 aa2.32□□□□□ -2.04
SDS23YGL056C YBR090CP38253 122 aa2.31□□□□□ -2.04
SDS23YGL056C BRP1P53194 125 aa2.31□□□□□ -2.04
SDS23YGL056C YPR013CQ12145 317 aa2.31□□□□□ -2.04
SDS23YGL056C YLR363W-AQ3E747 85 aa2.31□□□□□ -2.04
SDS23YGL056C YKR045CP36138 183 aa2.3□□□□□ -2.04
SDS23YGL056C DSE2P38844 325 aa2.3□□□□□ -2.04
SDS23YGL056C YDR366CP87287 132 aa2.3□□□□□ -2.04
SDS23YGL056C YDL157CQ12082 118 aa2.3□□□□□ -2.04
SDS23YGL056C PFY1P07274 126 aa2.29□□□□□ -2.04
SDS23YGL056C ANB1P19211 157 aa2.29□□□□□ -2.04
SDS23YGL056C YHL018WP38744 120 aaPredicted RBP2.29□□□□□ -2.04
SDS23YGL056C TOS6P48560 102 aa2.29□□□□□ -2.04
SDS23YGL056C MGR2Q02889 113 aa2.29□□□□□ -2.04
SDS23YGL056C YDR042CQ03205 200 aa2.29□□□□□ -2.04
SDS23YGL056C HOR7Q05827 59 aa2.29□□□□□ -2.04
SDS23YGL056C CCW12Q12127 133 aa2.29□□□□□ -2.04
SDS23YGL056C YKR070WP36151 352 aaKnown RBP2.28□□□□□ -2.04
SDS23YGL056C YER135CP40082 130 aa2.28□□□□□ -2.04
SDS23YGL056C SPI1P40092 148 aa2.28□□□□□ -2.04
SDS23YGL056C YMR141CP40211 102 aa2.28□□□□□ -2.04
SDS23YGL056C YGR017WP53210 297 aa2.28□□□□□ -2.04
SDS23YGL056C PRM3Q08931 133 aa2.28□□□□□ -2.04
SDS23YGL056C FCY1Q12178 158 aa2.28□□□□□ -2.04
SDS23YGL056C YKL023C-AQ2V2P3 75 aa2.28□□□□□ -2.04
SDS23YGL056C YNL146C-AQ3E7Z1 64 aa2.28□□□□□ -2.04
SDS23YGL056C MRPL24P36525 258 aaPredicted RBP2.27□□□□□ -2.05
SDS23YGL056C SNU13P39990 126 aaKnown RBP2.27□□□□□ -2.05
SDS23YGL056C VPS55P47111 140 aa2.27□□□□□ -2.05
SDS23YGL056C COF1Q03048 143 aaKnown RBP2.27□□□□□ -2.05
SDS23YGL056C YHR086W-AQ3E746 53 aa2.27□□□□□ -2.05
SDS23YGL056C YLR361C-AQ3E795 98 aa2.27□□□□□ -2.05
SDS23YGL056C CCW14O13547 238 aa2.27□□□□□ -2.05
SDS23YGL056C COX8P04039 78 aa2.27□□□□□ -2.05
SDS23YGL056C NRG2P38082 220 aa2.27□□□□□ -2.05
SDS23YGL056C HUA1P40325 198 aa2.27□□□□□ -2.05
SDS23YGL056C LIP1Q03579 150 aa2.27□□□□□ -2.05
SDS23YGL056C YMR103CQ04436 120 aa2.27□□□□□ -2.05
SDS23YGL056C YOR008C-AQ3E7B9 74 aa2.27□□□□□ -2.05
SDS23YGL056C SCS22Q6Q595 175 aa2.27□□□□□ -2.05
SDS23YGL056C PAI3P01094 68 aa2.26□□□□□ -2.05
SDS23YGL056C VAR1P02381 398 aa2.26□□□□□ -2.05
SDS23YGL056C YAR029WP39549 74 aa2.26□□□□□ -2.05
SDS23YGL056C YIL014C-AQ02598 104 aa2.26□□□□□ -2.05
SDS23YGL056C ELC1Q03071 99 aa2.26□□□□□ -2.05
SDS23YGL056C Q0297Q9ZZV8 51 aa2.26□□□□□ -2.05
SDS23YGL056C RPL43AP0CX25 92 aaKnown RBP2.25□□□□□ -2.05
SDS23YGL056C RPL43BP0CX26 92 aa2.25□□□□□ -2.05
SDS23YGL056C HMRA2P0CY13 119 aa2.25□□□□□ -2.05
SDS23YGL056C PRE1P22141 198 aaKnown RBP2.25□□□□□ -2.05
SDS23YGL056C YRA2P36036 203 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
SDS23YGL056C YIL102C-AQ2V2P5 75 aa2.25□□□□□ -2.05
SDS23YGL056C YCR075W-AQ3E830 75 aa2.25□□□□□ -2.05
SDS23YGL056C DCV1P43595 202 aa2.24□□□□□ -2.05
SDS23YGL056C YLR296WQ05898 108 aa2.24□□□□□ -2.05
SDS23YGL056C YPL261CQ08976 102 aa2.24□□□□□ -2.05
SDS23YGL056C YBR200W-AQ3E755 54 aa2.24□□□□□ -2.05
SDS23YGL056C COA3Q3E7B2 85 aa2.24□□□□□ -2.05
SDS23YGL056C MPC2P38857 129 aa2.23□□□□□ -2.05
SDS23YGL056C YLR194CQ05777 254 aa2.23□□□□□ -2.05
SDS23YGL056C YOR011W-AQ3E807 68 aa2.23□□□□□ -2.05
SDS23YGL056C QCR8P08525 94 aa2.23□□□□□ -2.05
SDS23YGL056C RPS11AP0CX47 156 aaKnown RBP2.23□□□□□ -2.05
SDS23YGL056C RPS11BP0CX48 156 aaKnown RBP2.23□□□□□ -2.05
SDS23YGL056C DDR48P18899 430 aaKnown RBP2.23□□□□□ -2.05
SDS23YGL056C HYP2P23301 157 aaKnown RBP2.23□□□□□ -2.05
SDS23YGL056C ERI1P62651 68 aaKnown RBP2.23□□□□□ -2.05
SDS23YGL056C AIM11P87275 137 aa2.23□□□□□ -2.05
SDS23YGL056C PMP3P87284 55 aa2.23□□□□□ -2.05
SDS23YGL056C NUM1Q00402 2748 aa2.22□□□□□ -2.05
SDS23YGL056C YEL067CP39978 195 aa2.22□□□□□ -2.05
SDS23YGL056C CIN5P40917 295 aa2.22□□□□□ -2.05
SDS23YGL056C YGR039WP53225 103 aa2.22□□□□□ -2.05
SDS23YGL056C YLR042CQ07990 161 aa2.22□□□□□ -2.05
SDS23YGL056C UTP20P35194 2493 aaKnown RBP2.21□□□□□ -2.06
SDS23YGL056C INO4P13902 151 aa2.21□□□□□ -2.06
SDS23YGL056C NHP2P32495 156 aaPredicted RBP2.21□□□□□ -2.06
SDS23YGL056C LSM6Q06406 86 aaKnown RBP2.21□□□□□ -2.06
SDS23YGL056C YDL241WQ07738 123 aa2.21□□□□□ -2.06
SDS23YGL056C YOR097CQ12274 175 aaPredicted RBP2.21□□□□□ -2.06
SDS23YGL056C YGR035W-AQ45U48 73 aa2.21□□□□□ -2.06
SDS23YGL056C YPR010C-AA5Z2X5 72 aa2.2□□□□□ -2.06
SDS23YGL056C YHR130CP38834 111 aa2.2□□□□□ -2.06
SDS23YGL056C SLO1Q3E784 85 aa2.2□□□□□ -2.06
SDS23YGL056C YGR240C-AQ3E786 66 aa2.2□□□□□ -2.06
SDS23YGL056C YBR219CP38317 127 aa2.19□□□□□ -2.06
SDS23YGL056C SHU1P38751 150 aa2.19□□□□□ -2.06
SDS23YGL056C YNL198CP40166 100 aa2.19□□□□□ -2.06
SDS23YGL056C RUB1Q03919 77 aa2.19□□□□□ -2.06
SDS23YGL056C YLR162WQ06235 118 aa2.19□□□□□ -2.06
SDS23YGL056C YHR007C-AQ07074 71 aa2.19□□□□□ -2.06
SDS23YGL056C YHR212W-AP0CX91 67 aa2.19□□□□□ -2.06
SDS23YGL056C UBC5P15732 148 aa2.19□□□□□ -2.06
SDS23YGL056C HPA2Q06592 156 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 100.5 ms