RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C SRP14P38985 146 aa0.35□□□□□ -2.35
PRE4YFR050C POG1P40473 351 aa0.35□□□□□ -2.35
PRE4YFR050C NSE4P43124 402 aa0.35□□□□□ -2.35
PRE4YFR050C YGL230CP53074 147 aa0.35□□□□□ -2.35
PRE4YFR050C LIP1Q03579 150 aa0.35□□□□□ -2.35
PRE4YFR050C KEI1Q06346 221 aa0.35□□□□□ -2.35
PRE4YFR050C ATP20Q12233 115 aa0.35□□□□□ -2.35
PRE4YFR050C CMC2Q3E7A4 109 aa0.35□□□□□ -2.35
PRE4YFR050C YHR213W-BQ8TGK1 99 aa0.35□□□□□ -2.35
PRE4YFR050C VMA10P48836 114 aaKnown RBP0.34□□□□□ -2.36
PRE4YFR050C IRC21Q04772 201 aa0.34□□□□□ -2.36
PRE4YFR050C SYM1Q06563 197 aa0.34□□□□□ -2.36
PRE4YFR050C YOR381W-AQ3E804 55 aa0.34□□□□□ -2.36
PRE4YFR050C QCR2P07257 368 aa0.33□□□□□ -2.36
PRE4YFR050C PAU2P32612 120 aa0.33□□□□□ -2.36
PRE4YFR050C YBR016WP38216 128 aa0.33□□□□□ -2.36
PRE4YFR050C COA6Q3E846 104 aa0.33□□□□□ -2.36
PRE4YFR050C RPS22AP0C0W1 130 aaKnown RBP0.32□□□□□ -2.36
PRE4YFR050C YBR027CP38220 110 aa0.32□□□□□ -2.36
PRE4YFR050C GIM5Q04493 163 aa0.32□□□□□ -2.36
PRE4YFR050C RPS22BQ3E7Y3 130 aaKnown RBP0.32□□□□□ -2.36
PRE4YFR050C ENV10Q99382 181 aa0.32□□□□□ -2.36
PRE4YFR050C ATP5P09457 212 aa0.31□□□□□ -2.36
PRE4YFR050C FUN14P18411 198 aa0.31□□□□□ -2.36
PRE4YFR050C SPT14P32363 452 aa0.31□□□□□ -2.36
PRE4YFR050C YEL014CP39999 101 aa0.31□□□□□ -2.36
PRE4YFR050C YMR141CP40211 102 aa0.31□□□□□ -2.36
PRE4YFR050C GLC8P41818 229 aa0.31□□□□□ -2.36
PRE4YFR050C YLR118CQ12354 227 aa0.31□□□□□ -2.36
PRE4YFR050C MED11Q99278 115 aa0.31□□□□□ -2.36
PRE4YFR050C RPS28BP0C0X0 67 aaKnown RBP0.3□□□□□ -2.36
PRE4YFR050C INO4P13902 151 aa0.3□□□□□ -2.36
PRE4YFR050C YKR041WP36134 250 aa0.3□□□□□ -2.36
PRE4YFR050C FYV4P38783 130 aaPredicted RBP0.3□□□□□ -2.36
PRE4YFR050C MGR2Q02889 113 aa0.3□□□□□ -2.36
PRE4YFR050C RPS28AQ3E7X9 67 aaPredicted RBP0.3□□□□□ -2.36
PRE4YFR050C PCC1Q3E833 88 aa0.3□□□□□ -2.36
PRE4YFR050C NHP6AP11632 93 aaKnown RBP0.29□□□□□ -2.36
PRE4YFR050C PKR1Q03880 122 aaKnown RBP0.29□□□□□ -2.36
PRE4YFR050C YPR153WQ06537 140 aa0.29□□□□□ -2.36
PRE4YFR050C ATP14Q12349 124 aa0.29□□□□□ -2.36
PRE4YFR050C YMR175W-AQ3E766 64 aa0.29□□□□□ -2.36
PRE4YFR050C SCS22Q6Q595 175 aa0.29□□□□□ -2.36
PRE4YFR050C PFY1P07274 126 aa0.28□□□□□ -2.36
PRE4YFR050C YOL013W-AP0C272 63 aaPredicted RBP0.28□□□□□ -2.36
PRE4YFR050C UBI4P0CG63 381 aaKnown RBP0.28□□□□□ -2.36
PRE4YFR050C MRPL44P19956 98 aa0.28□□□□□ -2.36
PRE4YFR050C AME1P38313 324 aa0.28□□□□□ -2.36
PRE4YFR050C IPI1P38803 334 aaPredicted RBP0.28□□□□□ -2.36
PRE4YFR050C YHR140WP38842 239 aa0.28□□□□□ -2.36
PRE4YFR050C YER181CP40097 107 aa0.28□□□□□ -2.36
PRE4YFR050C YDR042CQ03205 200 aa0.28□□□□□ -2.36
PRE4YFR050C TLG1Q03322 224 aa0.28□□□□□ -2.36
PRE4YFR050C YAL065CO13511 128 aa0.27□□□□□ -2.37
PRE4YFR050C YER039C-AP0CD97 72 aa0.27□□□□□ -2.37
PRE4YFR050C HAP3P13434 144 aa0.27□□□□□ -2.37
PRE4YFR050C SRP21P32342 167 aa0.27□□□□□ -2.37
PRE4YFR050C ATG8P38182 117 aaRIP-Chip data0.27□□□□□ -2.37not detected
PRE4YFR050C HHY1P39982 102 aa0.27□□□□□ -2.37
PRE4YFR050C LSM8P47093 109 aaKnown RBP0.27□□□□□ -2.37
PRE4YFR050C HHO1P53551 258 aa0.27□□□□□ -2.37
PRE4YFR050C AVO2Q04749 426 aa0.27□□□□□ -2.37
PRE4YFR050C NAT5Q08689 176 aa0.27□□□□□ -2.37
PRE4YFR050C YLR099W-AQ3E798 87 aa0.27□□□□□ -2.37
PRE4YFR050C HSP12P22943 109 aaKnown RBP0.26□□□□□ -2.37
PRE4YFR050C MVB12P42939 101 aa0.26□□□□□ -2.37
PRE4YFR050C LSM1P47017 172 aaKnown RBP0.26□□□□□ -2.37
PRE4YFR050C YGR039WP53225 103 aa0.26□□□□□ -2.37
PRE4YFR050C SEN15Q04675 128 aa0.26□□□□□ -2.37
PRE4YFR050C YDL241WQ07738 123 aa0.26□□□□□ -2.37
PRE4YFR050C MRPL11P36521 249 aaPredicted RBP0.25□□□□□ -2.37
PRE4YFR050C RBL2P48606 106 aaKnown RBP0.25□□□□□ -2.37
PRE4YFR050C MIC27P50945 234 aa0.25□□□□□ -2.37
PRE4YFR050C YMR122CQ03879 124 aa0.25□□□□□ -2.37
PRE4YFR050C YGL014C-AP0C5N1 53 aa0.24□□□□□ -2.37
PRE4YFR050C PAU19P0CE85 124 aa0.24□□□□□ -2.37
PRE4YFR050C PAU21P0CE86 164 aa0.24□□□□□ -2.37
PRE4YFR050C PAU22P0CE87 164 aa0.24□□□□□ -2.37
PRE4YFR050C MRPL31P14063 131 aaPredicted RBP0.24□□□□□ -2.37
PRE4YFR050C PAU3P25610 124 aa0.24□□□□□ -2.37
PRE4YFR050C GSP1P32835 219 aaKnown RBP0.24□□□□□ -2.37
PRE4YFR050C SLM6P38343 150 aa0.24□□□□□ -2.37
PRE4YFR050C PAU15P40585 124 aa0.24□□□□□ -2.37
PRE4YFR050C MOG1P47123 218 aa0.24□□□□□ -2.37
PRE4YFR050C DDR2P89113 61 aa0.24□□□□□ -2.37
PRE4YFR050C SOM1Q05676 74 aa0.24□□□□□ -2.37
PRE4YFR050C YLR296WQ05898 108 aa0.24□□□□□ -2.37
PRE4YFR050C PET20Q99373 253 aa0.24□□□□□ -2.37
PRE4YFR050C RPL36BO14455 100 aaKnown RBP0.23□□□□□ -2.37
PRE4YFR050C RPL36AP05745 100 aaPredicted RBP0.23□□□□□ -2.37
PRE4YFR050C YHR073W-AP0C5N7 58 aa0.23□□□□□ -2.37
PRE4YFR050C FYV5P25585 152 aa0.23□□□□□ -2.37
PRE4YFR050C HSP10P38910 106 aa0.23□□□□□ -2.37
PRE4YFR050C ICS3P47034 131 aa0.23□□□□□ -2.37
PRE4YFR050C COF1Q03048 143 aaKnown RBP0.23□□□□□ -2.37
PRE4YFR050C YOR034C-AQ3E735 80 aa0.23□□□□□ -2.37
PRE4YFR050C YNL042W-BQ3E7Z2 85 aa0.23□□□□□ -2.37
PRE4YFR050C UTP11P34247 250 aaPredicted RBP0.22□□□□□ -2.37
PRE4YFR050C YCL001W-AP87012 153 aa0.22□□□□□ -2.37
PRE4YFR050C ELC1Q03071 99 aa0.22□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms