RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W PAU20Q08322 120 aa1.16□□□□□ -2.22
SEC4YFL005W HUG1Q6Q5K6 68 aa1.16□□□□□ -2.22
SEC4YFL005W POL1P13382 1468 aa1.16□□□□□ -2.22
SEC4YFL005W NUP159P40477 1460 aa1.16□□□□□ -2.22
SEC4YFL005W TY1B-DR1Q03855 1755 aa1.16□□□□□ -2.22
SEC4YFL005W TY1B-DR3Q99231 1755 aa1.16□□□□□ -2.22
SEC4YFL005W MON2P48563 1636 aaPredicted RBP1.15□□□□□ -2.22
SEC4YFL005W PAI3P01094 68 aa1.15□□□□□ -2.23
SEC4YFL005W YHR214C-DP0CX93 97 aa1.15□□□□□ -2.23
SEC4YFL005W LSM2P38203 95 aaKnown RBP1.15□□□□□ -2.23
SEC4YFL005W MRPS12P53732 153 aa1.15□□□□□ -2.23
SEC4YFL005W POC4Q12245 148 aaPredicted RBP1.15□□□□□ -2.23
SEC4YFL005W YDR381C-AQ3E6R5 114 aa1.15□□□□□ -2.23
SEC4YFL005W YHR213W-BQ8TGK1 99 aa1.15□□□□□ -2.23
SEC4YFL005W YLR255CO13574 117 aa1.14□□□□□ -2.23
SEC4YFL005W SHU1P38751 150 aa1.14□□□□□ -2.23
SEC4YFL005W MPC2P38857 129 aa1.14□□□□□ -2.23
SEC4YFL005W YOR314WQ12506 109 aa1.14□□□□□ -2.23
SEC4YFL005W DOP1Q03921 1698 aa1.13□□□□□ -2.23
SEC4YFL005W RPS11AP0CX47 156 aaKnown RBP1.13□□□□□ -2.23
SEC4YFL005W RPS11BP0CX48 156 aaKnown RBP1.13□□□□□ -2.23
SEC4YFL005W SWM2P40342 146 aa1.13□□□□□ -2.23
SEC4YFL005W YJR128WP47162 119 aa1.13□□□□□ -2.23
SEC4YFL005W YOR105WQ08504 108 aa1.13□□□□□ -2.23
SEC4YFL005W YNR034W-AQ3E841 98 aa1.13□□□□□ -2.23
SEC4YFL005W URA2P07259 2214 aaKnown RBP1.13□□□□□ -2.23
SEC4YFL005W SIN3P22579 1536 aa1.13□□□□□ -2.23
SEC4YFL005W BLM10P43583 2143 aa1.12□□□□□ -2.23
SEC4YFL005W HHY1P39982 102 aa1.12□□□□□ -2.23
SEC4YFL005W LCL1Q02786 101 aa1.12□□□□□ -2.23
SEC4YFL005W TY1B-DR6P0C2I3 1755 aa1.11□□□□□ -2.23
SEC4YFL005W TY1B-LR2P0C2I5 1755 aa1.11□□□□□ -2.23
SEC4YFL005W TY1B-LR3P0C2I6 1755 aaKnown RBP1.11□□□□□ -2.23
SEC4YFL005W TY1B-PR3P0C2J1 1755 aaKnown RBP1.11□□□□□ -2.23
SEC4YFL005W UTP10P42945 1769 aaKnown RBP1.11□□□□□ -2.23
SEC4YFL005W TY1B-JR2P47100 1755 aaKnown RBP1.11□□□□□ -2.23
SEC4YFL005W TY1B-MR1Q04214 1755 aa1.11□□□□□ -2.23
SEC4YFL005W TY1B-MR2Q04670 1755 aaKnown RBP1.11□□□□□ -2.23
SEC4YFL005W TY1B-NL1Q12112 1755 aa1.11□□□□□ -2.23
SEC4YFL005W TY1B-GR1Q12141 1755 aa1.11□□□□□ -2.23
SEC4YFL005W TY1B-GR3Q12316 1755 aa1.11□□□□□ -2.23
SEC4YFL005W TY1B-PLQ12414 1755 aaKnown RBP1.11□□□□□ -2.23
SEC4YFL005W TY1B-BLQ12490 1755 aa1.11□□□□□ -2.23
SEC4YFL005W TY1B-ORQ92393 1755 aa1.11□□□□□ -2.23
SEC4YFL005W XRN1P22147 1528 aaKnown RBP1.11□□□□□ -2.23
SEC4YFL005W YAL065CO13511 128 aa1.11□□□□□ -2.23
SEC4YFL005W PAU23Q07987 124 aa1.11□□□□□ -2.23
SEC4YFL005W PAU17Q12370 124 aa1.11□□□□□ -2.23
SEC4YFL005W YDR119W-AQ2V2P9 66 aa1.11□□□□□ -2.23
SEC4YFL005W SMC4Q12267 1418 aa1.11□□□□□ -2.23
SEC4YFL005W FPR2P32472 135 aa1.1□□□□□ -2.23
SEC4YFL005W ATX1P38636 73 aa1.1□□□□□ -2.23
SEC4YFL005W YMR141CP40211 102 aa1.1□□□□□ -2.23
SEC4YFL005W YBR072C-AQ3E794 53 aa1.1□□□□□ -2.23
SEC4YFL005W BPH1P25356 2167 aa1.1□□□□□ -2.23
SEC4YFL005W RRP5Q05022 1729 aaKnown RBP1.09□□□□□ -2.23
SEC4YFL005W YDR010CQ12426 110 aa1.09□□□□□ -2.23
SEC4YFL005W YNL042W-BQ3E7Z2 85 aa1.09□□□□□ -2.23
SEC4YFL005W DNF3Q12674 1656 aa1.09□□□□□ -2.24
SEC4YFL005W RIM15P43565 1770 aa1.08□□□□□ -2.24
SEC4YFL005W QCR9P22289 66 aa1.08□□□□□ -2.24
SEC4YFL005W YPR145C-AQ2V2P0 78 aa1.08□□□□□ -2.24
SEC4YFL005W YOL097W-AQ3E7Y9 61 aa1.08□□□□□ -2.24
SEC4YFL005W YFL041W-AQ3E817 63 aa1.08□□□□□ -2.24
SEC4YFL005W PMD1P32634 1753 aa1.08□□□□□ -2.24
SEC4YFL005W UFD4P33202 1483 aa1.07□□□□□ -2.24
SEC4YFL005W SCC2Q04002 1493 aa1.07□□□□□ -2.24
SEC4YFL005W IQG1Q12280 1495 aa1.07□□□□□ -2.24
SEC4YFL005W APC1P53886 1748 aa1.07□□□□□ -2.24
SEC4YFL005W TCB3Q03640 1545 aaKnown RBP1.07□□□□□ -2.24
SEC4YFL005W COX7P10174 60 aa1.07□□□□□ -2.24
SEC4YFL005W RPO31P04051 1460 aa1.06□□□□□ -2.24
SEC4YFL005W TY1B-DR5P0C2I2 1755 aa1.06□□□□□ -2.24
SEC4YFL005W TY1B-PR1P0C2I9 1755 aaKnown RBP1.06□□□□□ -2.24
SEC4YFL005W TY1B-JR1P47098 1755 aa1.06□□□□□ -2.24
SEC4YFL005W TY1B-ML2Q03434 1755 aaKnown RBP1.06□□□□□ -2.24
SEC4YFL005W TY1B-ER1Q03612 1755 aa1.06□□□□□ -2.24
SEC4YFL005W TY1B-ER2Q03619 1755 aa1.06□□□□□ -2.24
SEC4YFL005W TY1B-ML1Q04711 1755 aaKnown RBP1.06□□□□□ -2.24
SEC4YFL005W FKS3Q04952 1785 aa1.06□□□□□ -2.24
SEC4YFL005W TY1B-LR1Q12088 1755 aaKnown RBP1.06□□□□□ -2.24
SEC4YFL005W TY1B-GR2Q12269 1755 aa1.06□□□□□ -2.24
SEC4YFL005W TY1B-OLQ12273 1755 aa1.06□□□□□ -2.24
SEC4YFL005W IML1P47170 1584 aa1.06□□□□□ -2.24
SEC4YFL005W NOP10Q6Q547 58 aaPredicted RBP1.06□□□□□ -2.24
SEC4YFL005W ATP18P81450 59 aa1.05□□□□□ -2.24
SEC4YFL005W YOR034C-AQ3E735 80 aa1.05□□□□□ -2.24
SEC4YFL005W YGR121W-AQ3E816 71 aa1.05□□□□□ -2.24
SEC4YFL005W YMR122W-AQ3E842 84 aa1.05□□□□□ -2.24
SEC4YFL005W TY2B-CP25384 1770 aa1.05□□□□□ -2.24
SEC4YFL005W TY2B-DR1Q12472 1770 aa1.05□□□□□ -2.24
SEC4YFL005W SSS1P35179 80 aa1.04□□□□□ -2.24
SEC4YFL005W YHR173CP38864 112 aa1.04□□□□□ -2.24
SEC4YFL005W SPI1P40092 148 aa1.04□□□□□ -2.24
SEC4YFL005W RPL38P49167 78 aaKnown RBP1.04□□□□□ -2.24
SEC4YFL005W YBR201C-AQ2V2Q3 67 aa1.04□□□□□ -2.24
SEC4YFL005W Q0032Q9ZZX7 96 aa1.04□□□□□ -2.24
SEC4YFL005W VPS15P22219 1454 aa1.04□□□□□ -2.24
SEC4YFL005W MYO4P32492 1471 aa1.04□□□□□ -2.24
SEC4YFL005W DNF1P32660 1571 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms