RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	HPA3	P39979	161 aa		0.88	□□□□□ -2.27
DOT6	YER088C	CIN5	P40917	295 aa		0.88	□□□□□ -2.27
DOT6	YER088C	PMP3	P87284	55 aa		0.88	□□□□□ -2.27
DOT6	YER088C	YPL225W	Q08971	146 aa	Known RBP	0.88	□□□□□ -2.27
DOT6	YER088C	YDL157C	Q12082	118 aa		0.88	□□□□□ -2.27
DOT6	YER088C	QCR9	P22289	66 aa		0.88	□□□□□ -2.27
DOT6	YER088C	YEA6	P39953	335 aa		0.88	□□□□□ -2.27
DOT6	YER088C	YEL067C	P39978	195 aa		0.88	□□□□□ -2.27
DOT6	YER088C	RPC10	P40422	70 aa		0.88	□□□□□ -2.27
DOT6	YER088C	ATP14	Q12349	124 aa		0.88	□□□□□ -2.27
DOT6	YER088C	PCC1	Q3E833	88 aa		0.88	□□□□□ -2.27
DOT6	YER088C	SPT14	P32363	452 aa		0.87	□□□□□ -2.27
DOT6	YER088C	YHR173C	P38864	112 aa		0.87	□□□□□ -2.27
DOT6	YER088C	CWC27	Q02770	301 aa		0.87	□□□□□ -2.27
DOT6	YER088C	AVO2	Q04749	426 aa		0.87	□□□□□ -2.27
DOT6	YER088C	INO4	P13902	151 aa		0.86	□□□□□ -2.27
DOT6	YER088C	AHT1	P29589	182 aa		0.86	□□□□□ -2.27
DOT6	YER088C	SPG1	P50088	95 aa		0.86	□□□□□ -2.27
DOT6	YER088C	SNA2	P56508	79 aa		0.86	□□□□□ -2.27
DOT6	YER088C	YMR007W	Q03675	126 aa		0.86	□□□□□ -2.27
DOT6	YER088C	YGL041C-B	Q3E750	60 aa		0.86	□□□□□ -2.27
DOT6	YER088C	ECM12	O13529	151 aa		0.86	□□□□□ -2.27
DOT6	YER088C	YGL149W	P53116	101 aa		0.86	□□□□□ -2.27
DOT6	YER088C	DAD1	Q12248	94 aa		0.86	□□□□□ -2.27
DOT6	YER088C	YLR361C-A	Q3E795	98 aa		0.86	□□□□□ -2.27
DOT6	YER088C	AQY2	P0CD90	149 aa		0.85	□□□□□ -2.27
DOT6	YER088C	NHP6A	P11632	93 aa	Known RBP	0.85	□□□□□ -2.27
DOT6	YER088C	UTP11	P34247	250 aa	Predicted RBP	0.85	□□□□□ -2.27
DOT6	YER088C	YMR141C	P40211	102 aa		0.85	□□□□□ -2.27
DOT6	YER088C	RPL37B	P51402	88 aa	Known RBP	0.85	□□□□□ -2.27
DOT6	YER088C	YLR146W-A	Q2V2P1	62 aa		0.85	□□□□□ -2.27
DOT6	YER088C	SCS22	Q6Q595	175 aa		0.85	□□□□□ -2.27
DOT6	YER088C	ENV10	Q99382	181 aa		0.85	□□□□□ -2.27
DOT6	YER088C	UBC4	P15731	148 aa		0.84	□□□□□ -2.27
DOT6	YER088C	PRE1	P22141	198 aa	Known RBP	0.84	□□□□□ -2.27
DOT6	YER088C	YHL042W	P38729	150 aa		0.84	□□□□□ -2.27
DOT6	YER088C	YAL064W	P39711	94 aa		0.84	□□□□□ -2.27
DOT6	YER088C	YIL163C	P40448	117 aa		0.84	□□□□□ -2.27
DOT6	YER088C	CNL1	Q06333	122 aa		0.84	□□□□□ -2.27
DOT6	YER088C	YDL241W	Q07738	123 aa		0.84	□□□□□ -2.27
DOT6	YER088C	YMR175W-A	Q3E766	64 aa		0.84	□□□□□ -2.27
DOT6	YER088C	MRPL31	P14063	131 aa	Predicted RBP	0.84	□□□□□ -2.28
DOT6	YER088C	YBR292C	P38357	123 aa		0.84	□□□□□ -2.28
DOT6	YER088C	YHR140W	P38842	239 aa		0.84	□□□□□ -2.28
DOT6	YER088C	YAR029W	P39549	74 aa		0.84	□□□□□ -2.28
DOT6	YER088C	LSM8	P47093	109 aa	Known RBP	0.84	□□□□□ -2.28
DOT6	YER088C	YLR118C	Q12354	227 aa		0.84	□□□□□ -2.28
DOT6	YER088C	YNL277W-A	Q3E7Z0	62 aa		0.84	□□□□□ -2.28
DOT6	YER088C	KTI11	Q3E840	82 aa		0.84	□□□□□ -2.28
DOT6	YER088C	FMP49	A0A023PZB3	126 aa		0.83	□□□□□ -2.28
DOT6	YER088C	YEL014C	P39999	101 aa		0.83	□□□□□ -2.28
DOT6	YER088C	CYB5	P40312	120 aa		0.83	□□□□□ -2.28
DOT6	YER088C	YCL001W-A	P87012	153 aa		0.83	□□□□□ -2.28
DOT6	YER088C	YPR153W	Q06537	140 aa		0.83	□□□□□ -2.28
DOT6	YER088C	YBR242W	P38331	238 aa		0.82	□□□□□ -2.28
DOT6	YER088C	HUA1	P40325	198 aa		0.82	□□□□□ -2.28
DOT6	YER088C	DCV1	P43595	202 aa		0.82	□□□□□ -2.28
DOT6	YER088C	GPI19	Q04082	140 aa		0.82	□□□□□ -2.28
DOT6	YER088C	YOR105W	Q08504	108 aa		0.82	□□□□□ -2.28
DOT6	YER088C	SLO1	Q3E784	85 aa		0.82	□□□□□ -2.28
DOT6	YER088C	KSH1	Q8TGJ3	72 aa		0.82	□□□□□ -2.28
DOT6	YER088C	RPS22A	P0C0W1	130 aa	Known RBP	0.82	□□□□□ -2.28
DOT6	YER088C	YEL008W	P40001	126 aa		0.82	□□□□□ -2.28
DOT6	YER088C	GLC8	P41818	229 aa		0.82	□□□□□ -2.28
DOT6	YER088C	ELC1	Q03071	99 aa		0.82	□□□□□ -2.28
DOT6	YER088C	TVP18	Q04767	167 aa		0.82	□□□□□ -2.28
DOT6	YER088C	COA3	Q3E7B2	85 aa		0.82	□□□□□ -2.28
DOT6	YER088C	YAL065C	O13511	128 aa		0.81	□□□□□ -2.28
DOT6	YER088C	MRPL44	P19956	98 aa		0.81	□□□□□ -2.28
DOT6	YER088C	YFL065C	P43539	102 aa		0.81	□□□□□ -2.28
DOT6	YER088C	YGL230C	P53074	147 aa		0.81	□□□□□ -2.28
DOT6	YER088C	YDR042C	Q03205	200 aa		0.81	□□□□□ -2.28
DOT6	YER088C	FCF2	Q12035	217 aa	Predicted RBP	0.81	□□□□□ -2.28
DOT6	YER088C	YER039C-A	P0CD97	72 aa		0.81	□□□□□ -2.28
DOT6	YER088C	YKR070W	P36151	352 aa	Known RBP	0.81	□□□□□ -2.28
DOT6	YER088C	CWP2	P43497	92 aa		0.81	□□□□□ -2.28
DOT6	YER088C	PAU4	P53427	120 aa		0.81	□□□□□ -2.28
DOT6	YER088C	SOM1	Q05676	74 aa		0.81	□□□□□ -2.28
DOT6	YER088C	PAU19	P0CE85	124 aa		0.8	□□□□□ -2.28
DOT6	YER088C	PAU21	P0CE86	164 aa		0.8	□□□□□ -2.28
DOT6	YER088C	PAU22	P0CE87	164 aa		0.8	□□□□□ -2.28
DOT6	YER088C	FYV5	P25585	152 aa		0.8	□□□□□ -2.28
DOT6	YER088C	PAU3	P25610	124 aa		0.8	□□□□□ -2.28
DOT6	YER088C	VMA7	P39111	118 aa		0.8	□□□□□ -2.28
DOT6	YER088C	PAU15	P40585	124 aa		0.8	□□□□□ -2.28
DOT6	YER088C	PHS1	P40857	217 aa		0.8	□□□□□ -2.28
DOT6	YER088C	NAT5	Q08689	176 aa		0.8	□□□□□ -2.28
DOT6	YER088C	YGR121W-A	Q3E816	71 aa		0.8	□□□□□ -2.28
DOT6	YER088C	YCR050C	P25630	102 aa		0.79	□□□□□ -2.28
DOT6	YER088C	SFT1	P43682	97 aa		0.79	□□□□□ -2.28
DOT6	YER088C	AIM11	P87275	137 aa		0.79	□□□□□ -2.28
DOT6	YER088C	Q0032	Q9ZZX7	96 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU1	P0CE88	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU14	P0CE89	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU6	P0CE90	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU18	P0CE91	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU8	P0CE92	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU11	P0CE93	120 aa		0.79	□□□□□ -2.28
DOT6	YER088C	PAU16	P35994	123 aa		0.79	□□□□□ -2.28
DOT6	YER088C	YBR090C	P38253	122 aa		0.79	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 111 ms