RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W YCH1P42937 148 aa7.54□□□□□ -1.2
SNF1YDR477W TIM10P87108 93 aa7.54□□□□□ -1.2
SNF1YDR477W YDR029WQ12111 104 aa7.54□□□□□ -1.2
SNF1YDR477W TAR1Q8TGM6 124 aa7.54□□□□□ -1.2
SNF1YDR477W YLR415CO13578 112 aa7.53□□□□□ -1.2
SNF1YDR477W UBC5P15732 148 aa7.52□□□□□ -1.2
SNF1YDR477W YBR219CP38317 127 aa7.52□□□□□ -1.2
SNF1YDR477W YPL038W-AQ3E7B4 63 aa7.52□□□□□ -1.2
SNF1YDR477W SPG4Q04438 115 aa7.52□□□□□ -1.21
SNF1YDR477W YBR056W-AI2HB52 66 aa7.51□□□□□ -1.21
SNF1YDR477W RAD6P06104 172 aa7.51□□□□□ -1.21
SNF1YDR477W COX14P39103 70 aa7.5□□□□□ -1.21
SNF1YDR477W UBC11P52492 156 aa7.5□□□□□ -1.21
SNF1YDR477W PMP3P87284 55 aa7.5□□□□□ -1.21
SNF1YDR477W SHH4Q06236 168 aa7.5□□□□□ -1.21
SNF1YDR477W EMC6Q12431 108 aa7.5□□□□□ -1.21
SNF1YDR477W RPR2P40571 144 aa7.49□□□□□ -1.21
SNF1YDR477W YHL018WP38744 120 aaPredicted RBP7.48□□□□□ -1.21
SNF1YDR477W YLR236CA0A023PZG4 107 aa7.48□□□□□ -1.21
SNF1YDR477W ECM12O13529 151 aa7.47□□□□□ -1.21
SNF1YDR477W YLL006W-AQ3E814 58 aa7.47□□□□□ -1.21
SNF1YDR477W HAL1Q01766 294 aa7.46□□□□□ -1.21
SNF1YDR477W VAM10Q08474 114 aa7.46□□□□□ -1.21
SNF1YDR477W YOR020W-AQ3E824 90 aa7.46□□□□□ -1.21
SNF1YDR477W YJR107C-AP0CT86 78 aa7.44□□□□□ -1.22
SNF1YDR477W TOM6P33448 61 aa7.44□□□□□ -1.22
SNF1YDR477W YSY6P38374 65 aa7.44□□□□□ -1.22
SNF1YDR477W RPS11AP0CX47 156 aaKnown RBP7.43□□□□□ -1.22
SNF1YDR477W RPS11BP0CX48 156 aaKnown RBP7.43□□□□□ -1.22
SNF1YDR477W RPL2AP0CX45 254 aaKnown RBP7.42□□□□□ -1.22
SNF1YDR477W RPL2BP0CX46 254 aaKnown RBP7.42□□□□□ -1.22
SNF1YDR477W YAR029WP39549 74 aa7.42□□□□□ -1.22
SNF1YDR477W TEL1P38110 2787 aa7.42□□□□□ -1.22
SNF1YDR477W YPS5P53057 165 aa7.42□□□□□ -1.22
SNF1YDR477W IRC21Q04772 201 aa7.42□□□□□ -1.22
SNF1YDR477W SRL1Q08673 210 aa7.42□□□□□ -1.22
SNF1YDR477W YER039C-AP0CD97 72 aa7.41□□□□□ -1.22
SNF1YDR477W EDC1P53080 175 aaPredicted RBP7.41□□□□□ -1.22
SNF1YDR477W YCR041WP37265 110 aa7.4□□□□□ -1.22
SNF1YDR477W SPO24Q3E752 67 aa7.4□□□□□ -1.22
SNF1YDR477W MPC3P53311 146 aa7.4□□□□□ -1.23
SNF1YDR477W YLR285C-AQ3E771 56 aa7.4□□□□□ -1.23
SNF1YDR477W ALG13P53178 202 aa7.39□□□□□ -1.23
SNF1YDR477W Q0297Q9ZZV8 51 aa7.38□□□□□ -1.23
SNF1YDR477W YAL065CO13511 128 aa7.35□□□□□ -1.23
SNF1YDR477W YLR156WP0CE96 114 aa7.35□□□□□ -1.23
SNF1YDR477W YLR159WP0CE97 114 aa7.35□□□□□ -1.23
SNF1YDR477W YLR161WP0CE98 114 aa7.35□□□□□ -1.23
SNF1YDR477W ATP18P81450 59 aa7.35□□□□□ -1.23
SNF1YDR477W YLR281CQ05863 155 aa7.35□□□□□ -1.23
SNF1YDR477W YMR122W-AQ3E842 84 aa7.35□□□□□ -1.23
SNF1YDR477W GAT4P40569 121 aa7.35□□□□□ -1.23
SNF1YDR477W PRP8P33334 2413 aaKnown RBP7.34□□□□□ -1.23
SNF1YDR477W YER187WP40102 141 aa7.34□□□□□ -1.23
SNF1YDR477W YDR246W-AQ3E763 66 aa7.34□□□□□ -1.23
SNF1YDR477W YCR050CP25630 102 aa7.33□□□□□ -1.24
SNF1YDR477W ICY1Q04329 127 aa7.32□□□□□ -1.24
SNF1YDR477W YFR009W-AP0C5M9 85 aa7.29□□□□□ -1.24
SNF1YDR477W YHR212W-AP0CX91 67 aa7.29□□□□□ -1.24
SNF1YDR477W RPL29P05747 59 aaPredicted RBP7.27□□□□□ -1.25
SNF1YDR477W RPL11AP0C0W9 174 aaKnown RBP7.27□□□□□ -1.25
SNF1YDR477W YCR001WP25347 104 aa7.27□□□□□ -1.25
SNF1YDR477W RPL38P49167 78 aaKnown RBP7.27□□□□□ -1.25
SNF1YDR477W CRC1Q12289 327 aa7.26□□□□□ -1.25
SNF1YDR477W YMR175W-AQ3E766 64 aa7.25□□□□□ -1.25
SNF1YDR477W YGR240C-AQ3E786 66 aa7.25□□□□□ -1.25
SNF1YDR477W RSM19P53733 91 aaPredicted RBP7.25□□□□□ -1.25
SNF1YDR477W ATP20Q12233 115 aa7.25□□□□□ -1.25
SNF1YDR477W MVB12P42939 101 aa7.24□□□□□ -1.25
SNF1YDR477W YBR126W-AQ8TGU7 68 aa7.24□□□□□ -1.25
SNF1YDR477W SBH1P52870 82 aa7.23□□□□□ -1.25
SNF1YDR477W ERI1P62651 68 aaKnown RBP7.23□□□□□ -1.25
SNF1YDR477W RPL11BQ3E757 174 aaPredicted RBP7.23□□□□□ -1.25
SNF1YDR477W MEC1P38111 2368 aa7.22□□□□□ -1.25
SNF1YDR477W YER145C-AA0A023PYF4 145 aa7.21□□□□□ -1.25
SNF1YDR477W RPB9P27999 122 aa7.21□□□□□ -1.25
SNF1YDR477W AIM4P38305 123 aaPredicted RBP7.21□□□□□ -1.25
SNF1YDR477W RSM18P40033 138 aa7.21□□□□□ -1.25
SNF1YDR477W SMD1Q02260 146 aaPredicted RBP7.21□□□□□ -1.25
SNF1YDR477W YDL241WQ07738 123 aa7.21□□□□□ -1.25
SNF1YDR477W YNL162W-AQ3E7A8 72 aa7.21□□□□□ -1.25
SNF1YDR477W YRA2P36036 203 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
SNF1YDR477W YBL081WP38180 368 aaKnown RBP7.2□□□□□ -1.26
SNF1YDR477W ERG28P40030 148 aa7.2□□□□□ -1.26
SNF1YDR477W TSC3Q3E790 80 aa7.19□□□□□ -1.26
SNF1YDR477W TDA2P40045 126 aa7.19□□□□□ -1.26
SNF1YDR477W RDS3Q06835 107 aaPredicted RBP7.19□□□□□ -1.26
SNF1YDR477W RPC10P40422 70 aa7.18□□□□□ -1.26
SNF1YDR477W RTG1P32607 177 aa7.17□□□□□ -1.26
SNF1YDR477W YKL183C-AQ3E765 70 aa7.17□□□□□ -1.26
SNF1YDR477W YMR320WQ04897 101 aa7.17□□□□□ -1.26
SNF1YDR477W AQY2P0CD90 149 aa7.16□□□□□ -1.26
SNF1YDR477W BET1P22804 142 aa7.16□□□□□ -1.26
SNF1YDR477W YAL064WP39711 94 aa7.16□□□□□ -1.26
SNF1YDR477W YDR274CP87283 123 aa7.16□□□□□ -1.26
SNF1YDR477W NOP10Q6Q547 58 aaPredicted RBP7.16□□□□□ -1.26
SNF1YDR477W YFL019CP43576 117 aa7.15□□□□□ -1.26
SNF1YDR477W UBC4P15731 148 aa7.14□□□□□ -1.27
SNF1YDR477W ICS3P47034 131 aa7.14□□□□□ -1.27
SNF1YDR477W YOL014WQ08110 124 aa7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms