RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W SNU13P39990 126 aaKnown RBP1.21□□□□□ -2.22
UBP1YDL122W DAN1P47178 298 aa1.21□□□□□ -2.22
UBP1YDL122W YOR385WQ08909 290 aa1.21□□□□□ -2.22
UBP1YDL122W RPS25AQ3E792 108 aaPredicted RBP1.21□□□□□ -2.22
UBP1YDL122W RRT15Q3E811 62 aa1.21□□□□□ -2.22
UBP1YDL122W YAL064WP39711 94 aa1.2□□□□□ -2.22
UBP1YDL122W SOM1Q05676 74 aa1.2□□□□□ -2.22
UBP1YDL122W PAU12P53343 120 aa1.2□□□□□ -2.22
UBP1YDL122W YLR194CQ05777 254 aa1.2□□□□□ -2.22
UBP1YDL122W FYV7Q12247 151 aa1.2□□□□□ -2.22
UBP1YDL122W YER039C-AP0CD97 72 aa1.19□□□□□ -2.22
UBP1YDL122W FYV5P25585 152 aa1.19□□□□□ -2.22
UBP1YDL122W UTP11P34247 250 aaPredicted RBP1.19□□□□□ -2.22
UBP1YDL122W RGM1Q00453 211 aa1.19□□□□□ -2.22
UBP1YDL122W MRPL44P19956 98 aa1.19□□□□□ -2.22
UBP1YDL122W QCR10P37299 77 aa1.19□□□□□ -2.22
UBP1YDL122W HPA3P39979 161 aa1.19□□□□□ -2.22
UBP1YDL122W YCL001W-AP87012 153 aa1.19□□□□□ -2.22
UBP1YDL122W YPR153WQ06537 140 aa1.19□□□□□ -2.22
UBP1YDL122W VAR1P02381 398 aa1.18□□□□□ -2.22
UBP1YDL122W UBC4P15731 148 aa1.18□□□□□ -2.22
UBP1YDL122W YMR252CQ04814 134 aa1.18□□□□□ -2.22
UBP1YDL122W YHR213WP0CI67 198 aa1.18□□□□□ -2.22
UBP1YDL122W YEL014CP39999 101 aa1.18□□□□□ -2.22
UBP1YDL122W YGL230CP53074 147 aa1.18□□□□□ -2.22
UBP1YDL122W YPL225WQ08971 146 aaKnown RBP1.18□□□□□ -2.22
UBP1YDL122W YHR086W-AQ3E746 53 aa1.18□□□□□ -2.22
UBP1YDL122W PDX3P38075 228 aaKnown RBP1.17□□□□□ -2.22
UBP1YDL122W YOR376W-AQ3E805 51 aa1.17□□□□□ -2.22
UBP1YDL122W KSH1Q8TGJ3 72 aa1.17□□□□□ -2.22
UBP1YDL122W YAR029WP39549 74 aa1.17□□□□□ -2.22
UBP1YDL122W IMP2P46972 177 aa1.17□□□□□ -2.22
UBP1YDL122W AVO2Q04749 426 aa1.17□□□□□ -2.22
UBP1YDL122W NAT5Q08689 176 aa1.17□□□□□ -2.22
UBP1YDL122W PAU2P32612 120 aa1.16□□□□□ -2.22
UBP1YDL122W YBR219CP38317 127 aa1.16□□□□□ -2.22
UBP1YDL122W PAM16P42949 149 aa1.16□□□□□ -2.22
UBP1YDL122W ERV14P53173 138 aa1.16□□□□□ -2.22
UBP1YDL122W SNA2P56508 79 aa1.16□□□□□ -2.22
UBP1YDL122W CWC27Q02770 301 aa1.16□□□□□ -2.22
UBP1YDL122W YGL041C-BQ3E750 60 aa1.16□□□□□ -2.22
UBP1YDL122W ECM12O13529 151 aa1.16□□□□□ -2.22
UBP1YDL122W PAU21P0CE86 164 aa1.16□□□□□ -2.22
UBP1YDL122W PAU22P0CE87 164 aa1.16□□□□□ -2.22
UBP1YDL122W SEC59P20048 519 aa1.16□□□□□ -2.22
UBP1YDL122W YKL044WP36092 106 aa1.16□□□□□ -2.22
UBP1YDL122W DCV1P43595 202 aa1.16□□□□□ -2.22
UBP1YDL122W BRP1P53194 125 aa1.16□□□□□ -2.22
UBP1YDL122W YLR162WQ06235 118 aa1.16□□□□□ -2.22
UBP1YDL122W HSP10P38910 106 aa1.15□□□□□ -2.23
UBP1YDL122W YMR122W-AQ3E842 84 aa1.15□□□□□ -2.23
UBP1YDL122W HUG1Q6Q5K6 68 aa1.15□□□□□ -2.23
UBP1YDL122W QCR8P08525 94 aa1.15□□□□□ -2.23
UBP1YDL122W FUN14P18411 198 aa1.15□□□□□ -2.23
UBP1YDL122W SPI1P40092 148 aa1.15□□□□□ -2.23
UBP1YDL122W YGR164WP53291 111 aa1.15□□□□□ -2.23
UBP1YDL122W YGR025WP53216 100 aa1.14□□□□□ -2.23
UBP1YDL122W GPI19Q04082 140 aa1.14□□□□□ -2.23
UBP1YDL122W ZEO1Q08245 113 aa1.14□□□□□ -2.23
UBP1YDL122W PAU24P38155 120 aa1.14□□□□□ -2.23
UBP1YDL122W YBR090CP38253 122 aa1.14□□□□□ -2.23
UBP1YDL122W TDA2P40045 126 aa1.14□□□□□ -2.23
UBP1YDL122W HAP3P13434 144 aa1.13□□□□□ -2.23
UBP1YDL122W PRE1P22141 198 aaKnown RBP1.13□□□□□ -2.23
UBP1YDL122W YEL008WP40001 126 aa1.13□□□□□ -2.23
UBP1YDL122W RPL13BP40212 199 aaKnown RBP1.13□□□□□ -2.23
UBP1YDL122W RPL13AQ12690 199 aaPredicted RBP1.13□□□□□ -2.23
UBP1YDL122W MED11Q99278 115 aa1.13□□□□□ -2.23
UBP1YDL122W UBC5P15732 148 aa1.12□□□□□ -2.23
UBP1YDL122W MRPL11P36521 249 aaPredicted RBP1.12□□□□□ -2.23
UBP1YDL122W YEA6P39953 335 aa1.12□□□□□ -2.23
UBP1YDL122W PMP3P87284 55 aa1.12□□□□□ -2.23
UBP1YDL122W YMR103CQ04436 120 aa1.12□□□□□ -2.23
UBP1YDL122W COA3Q3E7B2 85 aa1.11□□□□□ -2.23
UBP1YDL122W YGL010WP25338 174 aa1.11□□□□□ -2.23
UBP1YDL122W RPL36BO14455 100 aaKnown RBP1.1□□□□□ -2.23
UBP1YDL122W RPL36AP05745 100 aaPredicted RBP1.1□□□□□ -2.23
UBP1YDL122W YBR027CP38220 110 aa1.1□□□□□ -2.23
UBP1YDL122W YBR242WP38331 238 aa1.1□□□□□ -2.23
UBP1YDL122W YER187WP40102 141 aa1.1□□□□□ -2.23
UBP1YDL122W YLR296WQ05898 108 aa1.1□□□□□ -2.23
UBP1YDL122W YPL261CQ08976 102 aa1.1□□□□□ -2.23
UBP1YDL122W Q0017Q9ZZX8 53 aa1.1□□□□□ -2.23
UBP1YDL122W YHR130CP38834 111 aa1.1□□□□□ -2.23
UBP1YDL122W RPC10P40422 70 aa1.1□□□□□ -2.23
UBP1YDL122W PCC1Q3E833 88 aa1.1□□□□□ -2.23
UBP1YDL122W OST5Q92316 86 aa1.1□□□□□ -2.23
UBP1YDL122W YGL014C-AP0C5N1 53 aa1.09□□□□□ -2.23
UBP1YDL122W GTT1P40582 234 aa1.09□□□□□ -2.23
UBP1YDL122W YFL065CP43539 102 aa1.09□□□□□ -2.23
UBP1YDL122W YMR090WQ04304 227 aaKnown RBP1.09□□□□□ -2.23
UBP1YDL122W DAD1Q12248 94 aa1.09□□□□□ -2.23
UBP1YDL122W YCL001W-BQ96VH2 84 aa1.09□□□□□ -2.23
UBP1YDL122W PFY1P07274 126 aa1.09□□□□□ -2.24
UBP1YDL122W ATG8P38182 117 aaRIP-Chip data1.09□□□□□ -2.24not detected
UBP1YDL122W HUR1P45820 110 aa1.09□□□□□ -2.24
UBP1YDL122W SCP1Q08873 200 aa1.09□□□□□ -2.24
UBP1YDL122W VMA21P41806 77 aa1.08□□□□□ -2.24
UBP1YDL122W YIL014C-AQ02598 104 aa1.08□□□□□ -2.24
UBP1YDL122W YMR122CQ03879 124 aa1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms