RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W YOR020W-AQ3E824 90 aa4.77□□□□□ -1.65
SLX5YDL013W QCR9P22289 66 aa4.76□□□□□ -1.65
SLX5YDL013W RGM1Q00453 211 aa4.76□□□□□ -1.65
SLX5YDL013W SOM1Q05676 74 aa4.76□□□□□ -1.65
SLX5YDL013W RPL23AP0CX41 137 aaKnown RBP4.75□□□□□ -1.65
SLX5YDL013W RPL23BP0CX42 137 aaKnown RBP4.75□□□□□ -1.65
SLX5YDL013W IRC19Q07843 230 aa4.75□□□□□ -1.65
SLX5YDL013W ATP20Q12233 115 aa4.75□□□□□ -1.65
SLX5YDL013W YKL065W-AQ2V2P2 73 aa4.75□□□□□ -1.65
SLX5YDL013W OST5Q92316 86 aa4.75□□□□□ -1.65
SLX5YDL013W YLR156WP0CE96 114 aa4.75□□□□□ -1.65
SLX5YDL013W YLR159WP0CE97 114 aa4.75□□□□□ -1.65
SLX5YDL013W YLR161WP0CE98 114 aa4.75□□□□□ -1.65
SLX5YDL013W ATP19P81451 68 aa4.75□□□□□ -1.65
SLX5YDL013W YPR096CO13587 100 aa4.74□□□□□ -1.65
SLX5YDL013W YER188C-AP0C0V2 99 aa4.74□□□□□ -1.65
SLX5YDL013W YEL073CP39974 107 aa4.74□□□□□ -1.65
SLX5YDL013W MPC3P53311 146 aa4.74□□□□□ -1.65
SLX5YDL013W SED1Q01589 338 aa4.74□□□□□ -1.65
SLX5YDL013W UTH1P36135 365 aa4.73□□□□□ -1.65
SLX5YDL013W YIL163CP40448 117 aa4.73□□□□□ -1.65
SLX5YDL013W YPI1P43587 155 aa4.73□□□□□ -1.65
SLX5YDL013W SRL1Q08673 210 aa4.73□□□□□ -1.65
SLX5YDL013W VPS68Q12016 184 aa4.73□□□□□ -1.65
SLX5YDL013W MRPS8Q03799 155 aa4.73□□□□□ -1.65
SLX5YDL013W YPL278CQ08990 100 aa4.73□□□□□ -1.65
SLX5YDL013W RRT1P38192 103 aa4.72□□□□□ -1.65
SLX5YDL013W MIG3P39943 394 aa4.72□□□□□ -1.65
SLX5YDL013W YEL067CP39978 195 aa4.72□□□□□ -1.65
SLX5YDL013W RPL26BP53221 127 aaKnown RBP4.72□□□□□ -1.65
SLX5YDL013W YMR122CQ03879 124 aa4.72□□□□□ -1.65
SLX5YDL013W FLO9P39712 1322 aa4.72□□□□□ -1.65
SLX5YDL013W RPS23AP0CX29 145 aaKnown RBP4.71□□□□□ -1.66
SLX5YDL013W RPS23BP0CX30 145 aa4.71□□□□□ -1.66
SLX5YDL013W YHR022CP38763 256 aa4.71□□□□□ -1.66
SLX5YDL013W YNR077CP53758 84 aa4.71□□□□□ -1.66
SLX5YDL013W ACC1Q00955 2233 aaKnown RBP4.71□□□□□ -1.66
SLX5YDL013W MSA2P36157 363 aa4.71□□□□□ -1.66
SLX5YDL013W MPC2P38857 129 aa4.71□□□□□ -1.66
SLX5YDL013W RPR2P40571 144 aa4.7□□□□□ -1.66
SLX5YDL013W YOR192C-CQ3E736 78 aa4.7□□□□□ -1.66
SLX5YDL013W YGR035W-AQ45U48 73 aa4.7□□□□□ -1.66
SLX5YDL013W YBL071CP38185 102 aa4.69□□□□□ -1.66
SLX5YDL013W DCV1P43595 202 aa4.69□□□□□ -1.66
SLX5YDL013W YLR285C-AQ3E771 56 aa4.69□□□□□ -1.66
SLX5YDL013W POL2P21951 2222 aaKnown RBP4.69□□□□□ -1.66
SLX5YDL013W SEN1Q00416 2231 aaKnown RBP4.68□□□□□ -1.66
SLX5YDL013W YIR020CP40575 100 aa4.68□□□□□ -1.66
SLX5YDL013W YPR153WQ06537 140 aa4.68□□□□□ -1.66
SLX5YDL013W ERG2P32352 222 aa4.67□□□□□ -1.66
SLX5YDL013W YMR007WQ03675 126 aa4.67□□□□□ -1.66
SLX5YDL013W TMC1Q08422 150 aaPredicted RBP4.67□□□□□ -1.66
SLX5YDL013W IRA1P18963 3092 aa4.67□□□□□ -1.66
SLX5YDL013W CSF1Q12150 2958 aa4.67□□□□□ -1.66
SLX5YDL013W YGR269WP40326 108 aa4.65□□□□□ -1.66
SLX5YDL013W ARC15P40518 154 aaRIP-Chip data4.65□□□□□ -1.66not detected
SLX5YDL013W EDC1P53080 175 aaPredicted RBP4.65□□□□□ -1.66
SLX5YDL013W RPL36BO14455 100 aaKnown RBP4.64□□□□□ -1.67
SLX5YDL013W RPL36AP05745 100 aaPredicted RBP4.64□□□□□ -1.67
SLX5YDL013W PAU7P39545 55 aa4.62□□□□□ -1.67
SLX5YDL013W SPC1P46965 94 aa4.62□□□□□ -1.67
SLX5YDL013W YDR182W-AQ3E796 67 aa4.62□□□□□ -1.67
SLX5YDL013W YHL037CP38733 133 aa4.62□□□□□ -1.67
SLX5YDL013W COX14P39103 70 aa4.62□□□□□ -1.67
SLX5YDL013W YOL029CQ08187 201 aa4.62□□□□□ -1.67
SLX5YDL013W YNL162W-AQ3E7A8 72 aa4.62□□□□□ -1.67
SLX5YDL013W YDL022C-AP0C5L6 82 aa4.61□□□□□ -1.67
SLX5YDL013W YGL149WP53116 101 aa4.61□□□□□ -1.67
SLX5YDL013W YDL241WQ07738 123 aa4.61□□□□□ -1.67
SLX5YDL013W YJL197C-AP0C5P0 93 aa4.6□□□□□ -1.67
SLX5YDL013W IRC21Q04772 201 aa4.6□□□□□ -1.67
SLX5YDL013W MRPL38P35996 138 aaPredicted RBP4.6□□□□□ -1.67
SLX5YDL013W COX23P38824 151 aa4.6□□□□□ -1.67
SLX5YDL013W REE1P40893 198 aa4.6□□□□□ -1.67
SLX5YDL013W COA3Q3E7B2 85 aa4.6□□□□□ -1.67
SLX5YDL013W YIL046W-AQ3E7Z4 54 aa4.6□□□□□ -1.67
SLX5YDL013W HFA1P32874 2273 aa4.59□□□□□ -1.67
SLX5YDL013W YLR194CQ05777 254 aa4.59□□□□□ -1.67
SLX5YDL013W PRM7Q12459 698 aa4.59□□□□□ -1.67
SLX5YDL013W HSP150P32478 413 aa4.58□□□□□ -1.68
SLX5YDL013W YCR095W-AQ3E787 52 aa4.58□□□□□ -1.68
SLX5YDL013W BRR2P32639 2163 aaKnown RBP4.58□□□□□ -1.68
SLX5YDL013W TOR1P35169 2470 aa4.58□□□□□ -1.68
SLX5YDL013W NOP10Q6Q547 58 aaPredicted RBP4.58□□□□□ -1.68
SLX5YDL013W RTC6O14464 93 aa4.57□□□□□ -1.68
SLX5YDL013W YIL156W-BQ2V2P4 73 aa4.57□□□□□ -1.68
SLX5YDL013W RPS30AP0CX33 63 aaKnown RBP4.56□□□□□ -1.68
SLX5YDL013W RPS30BP0CX34 63 aaKnown RBP4.56□□□□□ -1.68
SLX5YDL013W BPH1P25356 2167 aa4.56□□□□□ -1.68
SLX5YDL013W YIL086CP40503 102 aa4.55□□□□□ -1.68
SLX5YDL013W MRX7P53869 86 aa4.55□□□□□ -1.68
SLX5YDL013W SNA2P56508 79 aa4.55□□□□□ -1.68
SLX5YDL013W YOL166W-AQ8TGJ1 51 aa4.55□□□□□ -1.68
SLX5YDL013W YMR254CQ04838 102 aa4.54□□□□□ -1.68
SLX5YDL013W YDR010CQ12426 110 aa4.54□□□□□ -1.68
SLX5YDL013W TEL1P38110 2787 aa4.54□□□□□ -1.68
SLX5YDL013W RPS27AP35997 82 aaKnown RBP4.54□□□□□ -1.68
SLX5YDL013W RPS27BP38711 82 aa4.54□□□□□ -1.68
SLX5YDL013W KRE9P39005 276 aa4.54□□□□□ -1.68
SLX5YDL013W HUG1Q6Q5K6 68 aa4.54□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms