RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W NCE101Q02820 53 aa3.56□□□□□ -1.84
VHC1YBR235W YGR121W-AQ3E816 71 aa3.56□□□□□ -1.84
VHC1YBR235W TSC3Q3E790 80 aa3.55□□□□□ -1.84
VHC1YBR235W NOP10Q6Q547 58 aaPredicted RBP3.55□□□□□ -1.84
VHC1YBR235W YBL071CP38185 102 aa3.55□□□□□ -1.84
VHC1YBR235W CTR2P38865 189 aa3.55□□□□□ -1.84
VHC1YBR235W MRPS12P53732 153 aa3.55□□□□□ -1.84
VHC1YBR235W HOT13P36078 116 aa3.54□□□□□ -1.84
VHC1YBR235W YGL088WP53151 121 aa3.54□□□□□ -1.84
VHC1YBR235W YGL258W-AQ3E740 77 aa3.54□□□□□ -1.84
VHC1YBR235W FAB1P34756 2278 aa3.54□□□□□ -1.84
VHC1YBR235W SAP30P38429 201 aa3.54□□□□□ -1.84
VHC1YBR235W YER135CP40082 130 aa3.54□□□□□ -1.84
VHC1YBR235W RPL38P49167 78 aaKnown RBP3.54□□□□□ -1.84
VHC1YBR235W YLR162WQ06235 118 aa3.54□□□□□ -1.84
VHC1YBR235W RNH203Q12338 110 aa3.54□□□□□ -1.84
VHC1YBR235W HSP150P32478 413 aa3.54□□□□□ -1.84
VHC1YBR235W MSA2P36157 363 aa3.54□□□□□ -1.84
VHC1YBR235W YMR122CQ03879 124 aa3.54□□□□□ -1.84
VHC1YBR235W IRC19Q07843 230 aa3.54□□□□□ -1.84
VHC1YBR235W YAL065CO13511 128 aa3.53□□□□□ -1.84
VHC1YBR235W YDR114CQ04597 100 aa3.53□□□□□ -1.84
VHC1YBR235W IRC21Q04772 201 aa3.53□□□□□ -1.84
VHC1YBR235W GLT1Q12680 2145 aaKnown RBP3.53□□□□□ -1.84
VHC1YBR235W HHF1P02309 103 aaKnown RBP3.53□□□□□ -1.84
VHC1YBR235W YCR022CP25620 114 aa3.53□□□□□ -1.84
VHC1YBR235W YBR144CP34215 104 aa3.53□□□□□ -1.84
VHC1YBR235W YHL005CP38752 130 aa3.53□□□□□ -1.84
VHC1YBR235W YAL064W-BO13512 126 aa3.52□□□□□ -1.85
VHC1YBR235W SHU1P38751 150 aa3.52□□□□□ -1.85
VHC1YBR235W TOS6P48560 102 aa3.52□□□□□ -1.85
VHC1YBR235W YMR254CQ04838 102 aa3.52□□□□□ -1.85
VHC1YBR235W OST5Q92316 86 aa3.52□□□□□ -1.85
VHC1YBR235W YPR153WQ06537 140 aa3.52□□□□□ -1.85
VHC1YBR235W YOR314WQ12506 109 aa3.52□□□□□ -1.85
VHC1YBR235W SRL1Q08673 210 aa3.51□□□□□ -1.85
VHC1YBR235W YOR008C-AQ3E7B9 74 aa3.51□□□□□ -1.85
VHC1YBR235W CCW14O13547 238 aa3.51□□□□□ -1.85
VHC1YBR235W YER188C-AP0C0V2 99 aa3.51□□□□□ -1.85
VHC1YBR235W REE1P40893 198 aa3.51□□□□□ -1.85
VHC1YBR235W YGR018CP53211 109 aa3.51□□□□□ -1.85
VHC1YBR235W YOR032W-AQ8TGS1 66 aa3.51□□□□□ -1.85
VHC1YBR235W YIR020CP40575 100 aa3.51□□□□□ -1.85
VHC1YBR235W SPG4Q04438 115 aa3.51□□□□□ -1.85
VHC1YBR235W RPS30AP0CX33 63 aaKnown RBP3.5□□□□□ -1.85
VHC1YBR235W RPS30BP0CX34 63 aaKnown RBP3.5□□□□□ -1.85
VHC1YBR235W YOR020W-AQ3E824 90 aa3.5□□□□□ -1.85
VHC1YBR235W YGR035W-AQ45U48 73 aa3.5□□□□□ -1.85
VHC1YBR235W RPR2P40571 144 aa3.49□□□□□ -1.85
VHC1YBR235W RPS23AP0CX29 145 aaKnown RBP3.49□□□□□ -1.85
VHC1YBR235W RPS23BP0CX30 145 aa3.49□□□□□ -1.85
VHC1YBR235W RPS27AP35997 82 aaKnown RBP3.49□□□□□ -1.85
VHC1YBR235W RPS27BP38711 82 aa3.49□□□□□ -1.85
VHC1YBR235W MPC3P53311 146 aa3.49□□□□□ -1.85
VHC1YBR235W YJR107C-AP0CT86 78 aa3.48□□□□□ -1.85
VHC1YBR235W YER145C-AA0A023PYF4 145 aa3.48□□□□□ -1.85
VHC1YBR235W YGL193CP53097 103 aa3.48□□□□□ -1.85
VHC1YBR235W TRS23Q03784 219 aa3.48□□□□□ -1.85
VHC1YBR235W YBR182C-AQ8TGU6 64 aa3.48□□□□□ -1.85
VHC1YBR235W FYV5P25585 152 aa3.48□□□□□ -1.85
VHC1YBR235W ARC15P40518 154 aaRIP-Chip data3.48□□□□□ -1.85not detected
VHC1YBR235W YSF3P0C074 85 aaPredicted RBP3.47□□□□□ -1.85
VHC1YBR235W URM1P40554 99 aaPredicted RBP3.47□□□□□ -1.85
VHC1YBR235W SPC1P46965 94 aa3.46□□□□□ -1.85
VHC1YBR235W YDR010CQ12426 110 aa3.46□□□□□ -1.85
VHC1YBR235W YIL156W-BQ2V2P4 73 aa3.46□□□□□ -1.85
VHC1YBR235W YOL166W-AQ8TGJ1 51 aa3.46□□□□□ -1.85
VHC1YBR235W YFL015CP43578 164 aa3.46□□□□□ -1.86
VHC1YBR235W YGR025WP53216 100 aa3.46□□□□□ -1.86
VHC1YBR235W TOM1Q03280 3268 aa3.46□□□□□ -1.86
VHC1YBR235W YPS5P53057 165 aa3.46□□□□□ -1.86
VHC1YBR235W YOL085CQ99345 113 aa3.45□□□□□ -1.86
VHC1YBR235W RPL36BO14455 100 aaKnown RBP3.45□□□□□ -1.86
VHC1YBR235W RPL36AP05745 100 aaPredicted RBP3.45□□□□□ -1.86
VHC1YBR235W YLR342W-AQ3E810 57 aa3.45□□□□□ -1.86
VHC1YBR235W YIL102CP40488 101 aa3.43□□□□□ -1.86
VHC1YBR235W RGM1Q00453 211 aa3.43□□□□□ -1.86
VHC1YBR235W YJL027CP47063 138 aaPredicted RBP3.43□□□□□ -1.86
VHC1YBR235W YJR146WP47174 117 aa3.43□□□□□ -1.86
VHC1YBR235W YKL097CP34245 136 aa3.42□□□□□ -1.86
VHC1YBR235W UTH1P36135 365 aa3.42□□□□□ -1.86
VHC1YBR235W POR2P40478 281 aa3.42□□□□□ -1.86
VHC1YBR235W LEE1Q02799 301 aaKnown RBP3.42□□□□□ -1.86
VHC1YBR235W IRA2P19158 3079 aa3.42□□□□□ -1.86
VHC1YBR235W RRT1P38192 103 aa3.41□□□□□ -1.86
VHC1YBR235W LIP1Q03579 150 aa3.41□□□□□ -1.86
VHC1YBR235W YFR032C-BQ8TGU2 87 aa3.41□□□□□ -1.86
VHC1YBR235W YHL037CP38733 133 aa3.41□□□□□ -1.86
VHC1YBR235W YPR013CQ12145 317 aa3.41□□□□□ -1.86
VHC1YBR235W YKL065W-AQ2V2P2 73 aa3.41□□□□□ -1.86
VHC1YBR235W ATP18P81450 59 aa3.4□□□□□ -1.86
VHC1YBR235W QCR10P37299 77 aa3.4□□□□□ -1.87
VHC1YBR235W FYV12Q08559 129 aa3.4□□□□□ -1.87
VHC1YBR235W YDR182W-AQ3E796 67 aa3.4□□□□□ -1.87
VHC1YBR235W SPG1P50088 95 aa3.39□□□□□ -1.87
VHC1YBR235W YFR009W-AP0C5M9 85 aa3.39□□□□□ -1.87
VHC1YBR235W YGR045CP53229 120 aa3.39□□□□□ -1.87
VHC1YBR235W YCR095W-AQ3E787 52 aa3.39□□□□□ -1.87
VHC1YBR235W CCW12Q12127 133 aa3.38□□□□□ -1.87
VHC1YBR235W YEL008WP40001 126 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms