RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W PAU9Q3E770 120 aa0.74□□□□□ -2.29
SNC1YAL030W RRT15Q3E811 62 aa0.74□□□□□ -2.29
SNC1YAL030W YNR034W-AQ3E841 98 aa0.74□□□□□ -2.29
SNC1YAL030W YCL001W-BQ96VH2 84 aa0.74□□□□□ -2.29
SNC1YAL030W TY1B-DR5P0C2I2 1755 aa0.74□□□□□ -2.29
SNC1YAL030W TY1B-PR1P0C2I9 1755 aaKnown RBP0.74□□□□□ -2.29
SNC1YAL030W TY1B-JR1P47098 1755 aa0.74□□□□□ -2.29
SNC1YAL030W TY1B-ML2Q03434 1755 aaKnown RBP0.74□□□□□ -2.29
SNC1YAL030W TY1B-ER1Q03612 1755 aa0.74□□□□□ -2.29
SNC1YAL030W TY1B-ER2Q03619 1755 aa0.74□□□□□ -2.29
SNC1YAL030W TY1B-DR1Q03855 1755 aa0.74□□□□□ -2.29
SNC1YAL030W TY1B-ML1Q04711 1755 aaKnown RBP0.74□□□□□ -2.29
SNC1YAL030W TY1B-LR1Q12088 1755 aaKnown RBP0.74□□□□□ -2.29
SNC1YAL030W TY1B-GR2Q12269 1755 aa0.74□□□□□ -2.29
SNC1YAL030W TY1B-OLQ12273 1755 aa0.74□□□□□ -2.29
SNC1YAL030W TY1B-DR3Q99231 1755 aa0.74□□□□□ -2.29
SNC1YAL030W DNF3Q12674 1656 aa0.73□□□□□ -2.29
SNC1YAL030W SNU13P39990 126 aaKnown RBP0.73□□□□□ -2.29
SNC1YAL030W AIM19P40502 157 aa0.73□□□□□ -2.29
SNC1YAL030W PAU4P53427 120 aa0.73□□□□□ -2.29
SNC1YAL030W NHP10Q03435 203 aa0.73□□□□□ -2.29
SNC1YAL030W MHF2Q3E829 80 aa0.73□□□□□ -2.29
SNC1YAL030W UTP10P42945 1769 aaKnown RBP0.73□□□□□ -2.29
SNC1YAL030W YBR292CP38357 123 aa0.72□□□□□ -2.29
SNC1YAL030W RSM18P40033 138 aa0.72□□□□□ -2.29
SNC1YAL030W SKI3P17883 1432 aaKnown RBP0.72□□□□□ -2.29
SNC1YAL030W STT4P37297 1900 aa0.72□□□□□ -2.29
SNC1YAL030W YOL164W-AQ3E7A5 60 aa0.71□□□□□ -2.3
SNC1YAL030W GDB1Q06625 1536 aa0.7□□□□□ -2.3
SNC1YAL030W RPS11AP0CX47 156 aaKnown RBP0.7□□□□□ -2.3
SNC1YAL030W RPS11BP0CX48 156 aaKnown RBP0.7□□□□□ -2.3
SNC1YAL030W MRPL38P35996 138 aaPredicted RBP0.7□□□□□ -2.3
SNC1YAL030W YCR075W-AQ3E830 75 aa0.7□□□□□ -2.3
SNC1YAL030W HKR1P41809 1802 aa0.69□□□□□ -2.3
SNC1YAL030W RPA12P32529 125 aaKnown RBP0.69□□□□□ -2.3
SNC1YAL030W PRP8P33334 2413 aaKnown RBP0.68□□□□□ -2.3
SNC1YAL030W ECM12O13529 151 aa0.68□□□□□ -2.3
SNC1YAL030W YDR042CQ03205 200 aa0.68□□□□□ -2.3
SNC1YAL030W PMD1P32634 1753 aa0.68□□□□□ -2.3
SNC1YAL030W POL1P13382 1468 aa0.67□□□□□ -2.3
SNC1YAL030W NHP2P32495 156 aaPredicted RBP0.67□□□□□ -2.3
SNC1YAL030W BSC4P53841 131 aa0.66□□□□□ -2.3
SNC1YAL030W Q0032Q9ZZX7 96 aa0.66□□□□□ -2.3
SNC1YAL030W YGL194C-AQ2V2P6 80 aa0.65□□□□□ -2.31
SNC1YAL030W PDX3P38075 228 aaKnown RBP0.64□□□□□ -2.31
SNC1YAL030W YNL198CP40166 100 aa0.64□□□□□ -2.31
SNC1YAL030W RPC10P40422 70 aa0.64□□□□□ -2.31
SNC1YAL030W RPS29BP41058 56 aaKnown RBP0.64□□□□□ -2.31
SNC1YAL030W RPL38P49167 78 aaKnown RBP0.64□□□□□ -2.31
SNC1YAL030W SCP1Q08873 200 aa0.64□□□□□ -2.31
SNC1YAL030W YNL042W-BQ3E7Z2 85 aa0.64□□□□□ -2.31
SNC1YAL030W YHR214C-DP0CX93 97 aa0.63□□□□□ -2.31
SNC1YAL030W YMR082CQ04276 118 aa0.63□□□□□ -2.31
SNC1YAL030W APC1P53886 1748 aa0.63□□□□□ -2.31
SNC1YAL030W LTE1P07866 1435 aa0.63□□□□□ -2.31
SNC1YAL030W COX7P10174 60 aa0.62□□□□□ -2.31
SNC1YAL030W FPR2P32472 135 aa0.62□□□□□ -2.31
SNC1YAL030W YBR201C-AQ2V2Q3 67 aa0.62□□□□□ -2.31
SNC1YAL030W YJR107C-AP0CT86 78 aa0.61□□□□□ -2.31
SNC1YAL030W YNL190WP53872 204 aa0.61□□□□□ -2.31
SNC1YAL030W ESP1Q03018 1630 aa0.6□□□□□ -2.31
SNC1YAL030W TOM6P33448 61 aa0.6□□□□□ -2.31
SNC1YAL030W PAU23Q07987 124 aa0.6□□□□□ -2.31
SNC1YAL030W PAU17Q12370 124 aa0.6□□□□□ -2.31
SNC1YAL030W TY2B-LR1P0C2J3 1770 aa0.6□□□□□ -2.31
SNC1YAL030W XRN1P22147 1528 aaKnown RBP0.59□□□□□ -2.31
SNC1YAL030W YAL065CO13511 128 aa0.59□□□□□ -2.31
SNC1YAL030W BPH1P25356 2167 aa0.59□□□□□ -2.32
SNC1YAL030W ATX1P38636 73 aa0.58□□□□□ -2.32
SNC1YAL030W ATP18P81450 59 aa0.58□□□□□ -2.32
SNC1YAL030W SDH6Q3E785 79 aa0.58□□□□□ -2.32
SNC1YAL030W YMR122W-AQ3E842 84 aa0.58□□□□□ -2.32
SNC1YAL030W TY2B-CP25384 1770 aa0.57□□□□□ -2.32
SNC1YAL030W TY2B-DR1Q12472 1770 aa0.57□□□□□ -2.32
SNC1YAL030W CWP2P43497 92 aa0.57□□□□□ -2.32
SNC1YAL030W YOR343CQ12484 108 aa0.57□□□□□ -2.32
SNC1YAL030W YMR175W-AQ3E766 64 aa0.57□□□□□ -2.32
SNC1YAL030W YIL134C-AQ45U18 67 aa0.57□□□□□ -2.32
SNC1YAL030W TY2B-DR2Q03494 1770 aa0.57□□□□□ -2.32
SNC1YAL030W TY2B-DR3Q07791 1770 aaKnown RBP0.57□□□□□ -2.32
SNC1YAL030W TY2B-OR1Q12113 1770 aa0.57□□□□□ -2.32
SNC1YAL030W TY2B-OR2Q12501 1770 aa0.57□□□□□ -2.32
SNC1YAL030W YSP2Q06681 1438 aa0.56□□□□□ -2.32
SNC1YAL030W TY1B-NL2Q99337 1749 aaKnown RBP0.56□□□□□ -2.32
SNC1YAL030W YFR009W-AP0C5M9 85 aa0.56□□□□□ -2.32
SNC1YAL030W YOR105WQ08504 108 aa0.56□□□□□ -2.32
SNC1YAL030W YKL068W-AQ3E826 78 aa0.56□□□□□ -2.32
SNC1YAL030W MMS22Q06164 1454 aa0.55□□□□□ -2.32
SNC1YAL030W TAO3P40468 2376 aa0.55□□□□□ -2.32
SNC1YAL030W NOP10Q6Q547 58 aaPredicted RBP0.55□□□□□ -2.32
SNC1YAL030W SIN3P22579 1536 aa0.54□□□□□ -2.32
SNC1YAL030W SGF11Q03067 99 aa0.54□□□□□ -2.32
SNC1YAL030W YCR085WP25650 117 aa0.53□□□□□ -2.32
SNC1YAL030W POC4Q12245 148 aaPredicted RBP0.53□□□□□ -2.32
SNC1YAL030W YPR145C-AQ2V2P0 78 aa0.52□□□□□ -2.33
SNC1YAL030W YKL065W-AQ2V2P2 73 aa0.52□□□□□ -2.33
SNC1YAL030W YBR016WP38216 128 aa0.51□□□□□ -2.33
SNC1YAL030W YIL156W-BQ2V2P4 73 aa0.51□□□□□ -2.33
SNC1YAL030W YPR108W-AQ3E7B3 70 aa0.51□□□□□ -2.33
SNC1YAL030W YOL097W-AQ3E7Y9 61 aa0.51□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms