RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 SRP68Q9UHB9 627 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 ENOPH1Q9UHY7 261 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 PCDHGC3Q9UN70 934 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 OR10H1Q9Y4A9 318 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 BIVM-ERCC5R4GMW8 1640 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 PRPF3O43395 683 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 OR10H2O60403 315 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 BMP4P12644 408 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 TPH1P17752 444 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 RXRGP48443 463 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 NLRP12P59046 1061 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 KRR1Q13601 381 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 CYP2A13Q16696 494 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 WDR45BQ5MNZ6 344 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 FIP1L1Q6UN15 594 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 TDRD5Q8NAT2 981 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 RP9Q8TA86 221 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 BHMTQ93088 406 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 DEFB129Q9H1M3 183 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 ZMYM5Q9UJ78 669 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 ADAM21Q9UKJ8 722 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 UBE2Q2LH0YL09 131 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 ME2P23368 584 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 ARL3P36405 182 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 CDH8P55286 799 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 PLGLB1Q02325 96 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 RASSF6Q6ZTQ3 369 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 R3HCC1LQ7Z5L2 792 aaKnown RBP6.52□□□□□ -1.37
CDKL5-205ENST00000623535 HIPK4Q8NE63 616 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 ACDQ96AP0 544 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 MTMR12Q9C0I1 747 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 TMBIM4Q9HC24 238 aa6.52□□□□□ -1.37
CDKL5-205ENST00000623535 GNG14A0A1W2PPG7 69 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 CYP27B1O15528 508 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 MUTP22033 750 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 ACTR2P61160 394 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 TBL3Q12788 808 aaKnown RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 PTGES3Q15185 160 aaKnown RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 USP44Q9H0E7 712 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 EIF3LQ9Y262 564 aaKnown RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 A6NCN8 305 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 TBC1D4O60343 1298 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 GRAP2O75791 330 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 F9P00740 461 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 SLC44A5Q8NCS7 719 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 PARVAQ9NVD7 372 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 PCDHB5Q9Y5E4 795 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 CHRNA5P30532 468 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 DHPSP49366 369 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 RPL19P84098 196 aaKnown RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 TCHHL1Q5QJ38 904 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 PDSS1Q5T2R2 415 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 ACOT1Q86TX2 421 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 GPC2Q8N158 579 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 GTPBP2Q9BX10 602 aaKnown RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 FOXP1Q9H334 677 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 RAD21L1Q9H4I0 556 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 EMILIN3Q9NT22 766 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 CYP2C8P10632 490 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 ERVK-9P63128 1117 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 MKRN4PQ13434 485 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 INPP5AQ14642 412 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 FAM45BPQ6NSW5 357 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 OTOP3Q7RTS5 596 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 INPP5DQ92835 1189 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 FRMD6Q96NE9 622 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 MYL10Q9BUA6 226 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 DNAJC5Q9H3Z4 198 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 SOX13Q9UN79 622 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 ERVK-11Q9UQG0 969 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 hCG_1642624A0A1W2PR95 340 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 FAM170AA1A519 330 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 E7EWF7 191 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 CLTAP09496 248 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 PDGFRBP09619 1106 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 PDGFRAP16234 1089 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 NEK2P51955 445 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 NCF4Q15080 339 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 KIAA0319Q5VV43 1072 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 RABEPKQ7Z6M1 372 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 CHPFQ8IZ52 775 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 NECTIN3Q9NQS3 549 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 SAMSN1Q9NSI8 373 aaKnown RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 COPS7AQ9UBW8 275 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 ADAM30Q9UKF2 790 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 USP6P35125 1406 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 SMIM31A0A1B0GVY4 71 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 QSOX1O00391 747 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 IGF2BP3O00425 579 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 GLUD1P00367 558 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 CCNYL3P0C7X3 344 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 HDAC1Q13547 482 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 SPIDRQ14159 915 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 MAN2A1Q16706 1144 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 GRAMD1BQ3KR37 738 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 EFCAB12Q6NXP0 572 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 PBKQ96KB5 322 aa6.51□□□□□ -1.37
CDKL5-205ENST00000623535 NUSAP1Q9BXS6 441 aaKnown RBP6.51□□□□□ -1.37
CDKL5-205ENST00000623535 VPS11Q9H270 941 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms