RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 SAAL1Q96ER3 474 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 FUBP3Q96I24 572 aaKnown RBP eCLIP8.37□□□□□ -1.073e-7■■■□□ 18.4
CLK1-215ENST00000621181 IKZF4Q9H2S9 585 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 ST6GALNAC4Q9H4F1 302 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 SLC32A1Q9H598 525 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 MRPL44Q9H9J2 332 aaKnown RBP8.37□□□□□ -1.07
CLK1-215ENST00000621181 RBAKQ9NYW8 714 aaPredicted RBP8.37□□□□□ -1.07
CLK1-215ENST00000621181 BCCIPQ9P287 314 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLK1-215ENST00000621181 ARHGAP26Q9UNA1 814 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 R3HCC1Q9Y3T6 440 aaKnown RBP8.37□□□□□ -1.07
CLK1-215ENST00000621181 PKD1L2Q7Z442 2459 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 KIAA1549LQ6ZVL6 1849 aa8.37□□□□□ -1.07
CLK1-215ENST00000621181 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 MYMKA6NI61 221 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 SRRM3A6NNA2 597 aaPredicted RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 OPRD1P41143 372 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 LHX1P48742 406 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 CCDC142Q17RM4 750 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 C4orf50Q6ZRC1 276 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 DYMQ7RTS9 669 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 ZNF720Q7Z2F6 126 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 TMEFF1Q8IYR6 380 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 LRRC52Q8N7C0 313 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 SPATA18Q8TC71 538 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 TMC2Q8TDI7 906 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 WHAMMQ8TF30 809 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 GATA6Q92908 595 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 HVCN1Q96D96 273 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 PKMYT1Q99640 499 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 GCNT4Q9P109 453 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 EVLQ9UI08 416 aaPredicted RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 ITGA11Q9UKX5 1188 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 EXOC7Q9UPT5 735 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 MYO18AQ92614 2054 aaKnown RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 HELZP42694 1942 aaKnown RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 NBEAQ8NFP9 2946 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 ANTXRLA6NF34 631 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 LEFTY2O00292 366 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 HCRTO43612 131 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 HYAL3O43820 417 aaPredicted RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 KLF8O95600 359 aaPredicted RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 ABL1P00519 1130 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 CFIP05156 583 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 TMEM191BP0C7N4 346 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 HOXB3P14651 431 aaPredicted RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 TCF3P15923 654 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 MSNP26038 577 aaKnown RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 ANXA13P27216 316 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 LONP1P36776 959 aaKnown RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 GRIK1P39086 918 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 PTGER3P43115 390 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 ATXN3P54252 364 aaPredicted RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 WNT7BP56706 349 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 PSMC1P62191 440 aaKnown RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 MRPS21P82921 87 aaKnown RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 KCNA1Q09470 495 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 MYO1EQ12965 1108 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 ACAP1Q15027 740 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 DENND5BQ6ZUT9 1274 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 FILIP1Q7Z7B0 1213 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 SYT12Q8IV01 421 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 BRSK2Q8IWQ3 736 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 PGBD3Q8N328 593 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 ALLCQ8N6M5 410 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 TOP6BLQ8N6T0 577 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 TXNDC5Q8NBS9 432 aaKnown RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 HMGB4Q8WW32 186 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 FNBP1Q96RU3 617 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 MTMR12Q9C0I1 747 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 POLMQ9NP87 494 aaPredicted RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 SMPD4Q9NXE4 827 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 GDAP2Q9NXN4 497 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 EHD2Q9NZN4 543 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 TRPM5Q9NZQ8 1165 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 TBC1D7Q9P0N9 293 aa8.36□□□□□ -1.07
CLK1-215ENST00000621181 MAGEC2Q9UBF1 373 aaPredicted RBP8.36□□□□□ -1.07
CLK1-215ENST00000621181 PTPRDP23468 1912 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 ANKRD11Q6UB99 2663 aaPredicted RBP8.35□□□□□ -1.07
CLK1-215ENST00000621181 ATXN2Q99700 1313 aaKnown RBP8.35□□□□□ -1.07
CLK1-215ENST00000621181 MYOFQ9NZM1 2061 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 SLC9A3R1O14745 358 aaPredicted RBP8.35□□□□□ -1.07
CLK1-215ENST00000621181 TNFRSF10BO14763 440 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 GABRDO14764 452 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 SCAMP3O14828 347 aaKnown RBP8.35□□□□□ -1.07
CLK1-215ENST00000621181 KAT7O95251 611 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 GCNT3O95395 438 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 BMP15O95972 392 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 LDHAP00338 332 aaKnown RBP8.35□□□□□ -1.07
CLK1-215ENST00000621181 APODP05090 189 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 CYP17A1P05093 508 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 ENGP17813 658 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 PFKLP17858 780 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 BDNFP23560 247 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 RDXP35241 583 aaKnown RBP8.35□□□□□ -1.07
CLK1-215ENST00000621181 P2RY2P41231 377 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 MAGEA11P43364 429 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 SIM1P81133 766 aaPredicted RBP8.35□□□□□ -1.07
CLK1-215ENST00000621181 RBP5P82980 135 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 ZXDBP98169 803 aa8.35□□□□□ -1.07
CLK1-215ENST00000621181 CYP27A1Q02318 531 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms