RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PPP2R5DQ14738 602 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 MTF1Q14872 753 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 ZNF77Q15935 545 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 FOXR2Q6PJQ5 311 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 SPEM1Q8N4L4 309 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 C12orf29Q8N999 325 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 PDZD8Q8NEN9 1154 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 TTC8Q8TAM2 541 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 SLC2A14Q8TDB8 520 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 SH3RF2Q8TEC5 729 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 WHAMMQ8TF30 809 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 OSCP1Q8WVF1 389 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 SEMA4DQ92854 862 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 HNRNPABQ99729 332 aaKnown RBP11.16□□□□□ -0.62
CCDC9-203ENST00000596938 NT5C1AQ9BXI3 368 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 DNAI2Q9GZS0 605 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 RNF38Q9H0F5 515 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 EBF3Q9H4W6 596 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 DUS2Q9NX74 493 aaKnown RBP11.16□□□□□ -0.62
CCDC9-203ENST00000596938 MAN1B1Q9UKM7 699 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 COQ4Q9Y3A0 265 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 PCDHGA2Q9Y5H1 932 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 FRYLO94915 3013 aa11.16□□□□□ -0.62
CCDC9-203ENST00000596938 TRDMT1O14717 391 aaKnown RBP11.15□□□□□ -0.62
CCDC9-203ENST00000596938 PSMA7O14818 248 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 CILPO75339 1184 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 OAS1P00973 400 aaKnown RBP11.15□□□□□ -0.62
CCDC9-203ENST00000596938 LMNAP02545 664 aaKnown RBP11.15□□□□□ -0.62
CCDC9-203ENST00000596938 ZDHHC11BP0C7U3 371 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 ARSAP15289 507 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 CXCL12P48061 93 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 MXI1P50539 228 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 CCR3P51677 355 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 NRLP54845 237 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 ZXDBP98169 803 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 NR1H3Q13133 447 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 CCINQ13939 588 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 GAS6Q14393 721 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 PON2Q15165 354 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 TMEM196Q5HYL7 178 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 WDR44Q5JSH3 913 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 TRIM68Q6AZZ1 485 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 FILIP1Q7Z7B0 1213 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 ZBTB44Q8NCP5 570 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 ZMIZ2Q8NF64 920 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 SCAMP5Q8TAC9 235 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 ATP2A3Q93084 1043 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 CYFIP2Q96F07 1278 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 CEP63Q96MT8 703 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 SMOQ99835 787 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 MMRN2Q9H8L6 949 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 ECT2Q9H8V3 914 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 METTL14Q9HCE5 456 aaKnown RBP11.15□□□□□ -0.62
CCDC9-203ENST00000596938 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.15□□□□□ -0.622e-9■■■■■ 149.6
CCDC9-203ENST00000596938 ZSCAN32Q9NX65 697 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 HMGXB4Q9UGU5 601 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 ARMCX3Q9UH62 379 aaPredicted RBP11.15□□□□□ -0.62
CCDC9-203ENST00000596938 CHORDC1Q9UHD1 332 aaPredicted RBP11.15□□□□□ -0.62
CCDC9-203ENST00000596938 R4GN57 208 aa11.15□□□□□ -0.62
CCDC9-203ENST00000596938 CFAP54Q96N23 3096 aa11.15□□□□□ -0.63
CCDC9-203ENST00000596938 COL4A3Q01955 1670 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 TRIM49BA6NDI0 452 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 PPP1R3GB7ZBB8 358 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 LEFTY2O00292 366 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 PMM2O15305 246 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 LILRB5O75023 590 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 BEST1O76090 585 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 PAPSS2O95340 614 aaPredicted RBP11.14□□□□□ -0.63
CCDC9-203ENST00000596938 ABL1P00519 1130 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 TDGF1P13385 188 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 CCDC130P13994 396 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
CCDC9-203ENST00000596938 BMP6P22004 513 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 GJA4P35212 333 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 IFNAR2P48551 515 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 TUBP50607 506 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 SLC5A3P53794 718 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 MAP3K7CLP57077 242 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 GRSF1Q12849 480 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC9-203ENST00000596938 ORC1Q13415 861 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 MORC3Q14149 939 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 EML3Q32P44 896 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 CBWD6Q4V339 395 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 CBWD3Q5JTY5 395 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 CBWD5Q5RIA9 395 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 HECTD3Q5T447 861 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 ISM2Q6H9L7 571 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 ADGRG2Q8IZP9 1017 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 CPA6Q8N4T0 437 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 ATRIPQ8WXE1 791 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 FBXO32Q969P5 355 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 EXOC4Q96A65 974 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 CHFRQ96EP1 664 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 TWNKQ96RR1 684 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 LINC00597Q9H2U6 94 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 FBXO44Q9H4M3 255 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 PNPLA8Q9NP80 782 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 KRT82Q9NSB4 513 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 RBM12Q9NTZ6 932 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms