RNA–Protein interactions for RNA: ENST00000566416.1

VAC14-207, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 780 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-207ENST00000566416 UBXN11Q5T124 520 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 TWF2Q6IBS0 349 aaKnown RBP9.91□□□□□ -0.82
VAC14-207ENST00000566416 EP400NLQ6ZTU2 488 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 TOGARAM2Q6ZUX3 1019 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 MRPL10Q7Z7H8 261 aaKnown RBP9.91□□□□□ -0.82
VAC14-207ENST00000566416 EFCAB13Q8IY85 973 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 VWA5B2Q8N398 1253 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 RNF10Q8N5U6 811 aaKnown RBP9.91□□□□□ -0.82
VAC14-207ENST00000566416 BEST2Q8NFU1 509 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 OR5B17Q8NGF7 314 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 SREK1Q8WXA9 508 aaKnown RBP9.91□□□□□ -0.82
VAC14-207ENST00000566416 ASB2Q96Q27 587 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 SYT11Q9BT88 431 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 PLVAPQ9BX97 442 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 MTMR12Q9C0I1 747 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 DNAI2Q9GZS0 605 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 LMAN2LQ9H0V9 348 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 ELAC1Q9H777 363 aaKnown RBP9.91□□□□□ -0.82
VAC14-207ENST00000566416 CCSER2Q9H7U1 834 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 ALG13Q9NP73 1137 aaKnown RBP9.91□□□□□ -0.82
VAC14-207ENST00000566416 SLC38A7Q9NVC3 462 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.91□□□□□ -0.82
VAC14-207ENST00000566416 GIT1Q9Y2X7 761 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 PAXBP1Q9Y5B6 917 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 PCDHB2Q9Y5E7 798 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 PCDHB12Q9Y5F1 795 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 BRWD1Q9NSI6 2320 aa9.91□□□□□ -0.82
VAC14-207ENST00000566416 A0A0U1RQF3 1178 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 C5orf67F2Z3F1 127 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 FOXN3O00409 490 aaPredicted RBP9.9□□□□□ -0.82
VAC14-207ENST00000566416 LCE2BO14633 110 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 INPPL1O15357 1258 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 FGFR1P11362 822 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 ATF7P17544 494 aaPredicted RBP9.9□□□□□ -0.82
VAC14-207ENST00000566416 GPLD1P80108 840 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 TFAMQ00059 246 aaKnown RBP9.9□□□□□ -0.82
VAC14-207ENST00000566416 TFF2Q03403 129 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 KIF5AQ12840 1032 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 MYO1EQ12965 1108 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 TUBB2AQ13885 445 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 NAB2Q15742 525 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 ZNF394Q53GI3 561 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 JADE1Q6IE81 842 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 FOXR1Q6PIV2 292 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 TRIM72Q6ZMU5 477 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 ECHDC2Q86YB7 292 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 CCNJLQ8IV13 435 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 ARHGEF19Q8IW93 802 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 SLC30A5Q8TAD4 765 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 CXorf38Q8TB03 319 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 PGBD4Q96DM1 585 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 ZNF560Q96MR9 790 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 KREMEN1Q96MU8 473 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 TUBB2BQ9BVA1 445 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 XYLT2Q9H1B5 865 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 ACBD3Q9H3P7 528 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 NSUN3Q9H649 340 aaKnown RBP9.9□□□□□ -0.82
VAC14-207ENST00000566416 FAM105AQ9NUU6 356 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 DZANK1Q9NVP4 752 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 GGT7Q9UJ14 662 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 NENFQ9UMX5 172 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 IPPQ9Y573 584 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 PCDHGB7Q9Y5F8 929 aa9.9□□□□□ -0.82
VAC14-207ENST00000566416 TTC28Q96AY4 2481 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 MYH10P35580 1976 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 A0A0A6YYK5 440 aaPredicted RBP9.89□□□□□ -0.83
VAC14-207ENST00000566416 TMEM238LA0A1B0GVL6 79 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 C2CD2LO14523 706 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 GRM6O15303 877 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 KIF5CO60282 957 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 RECQL4O94761 1208 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 EOMESO95936 686 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 NFICP08651 508 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 LRPAP1P30533 357 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 PDE6CP51160 858 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 RACK1P63244 317 aaKnown RBP9.89□□□□□ -0.83
VAC14-207ENST00000566416 FAM189BP81408 668 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 MTF1Q14872 753 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 TCEAL1Q15170 157 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 IFI16Q16666 785 aaKnown RBP9.89□□□□□ -0.83
VAC14-207ENST00000566416 ZNF699Q32M78 642 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 SEZ6Q53EL9 994 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 ZNF667Q5HYK9 610 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 ZNF571Q7Z3V5 609 aaPredicted RBP9.89□□□□□ -0.83
VAC14-207ENST00000566416 KIAA1328Q86T90 577 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 UBR7Q8N806 425 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 KLHL23Q8NBE8 558 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 KIF18AQ8NI77 898 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 SPATA18Q8TC71 538 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 MICAL1Q8TDZ2 1067 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 NANOS1Q8WY41 292 aaKnown RBP9.89□□□□□ -0.83
VAC14-207ENST00000566416 PPP2R3CQ969Q6 453 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 EIF2AQ9BY44 585 aaKnown RBP9.89□□□□□ -0.83
VAC14-207ENST00000566416 OXCT2Q9BYC2 517 aaPredicted RBP9.89□□□□□ -0.83
VAC14-207ENST00000566416 SRA1Q9HD15 236 aaKnown RBP9.89□□□□□ -0.83
VAC14-207ENST00000566416 RRAGDQ9NQL2 400 aaPredicted RBP9.89□□□□□ -0.83
VAC14-207ENST00000566416 DPP3Q9NY33 737 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 SNTG2Q9NY99 539 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 SIX4Q9UIU6 781 aa9.89□□□□□ -0.83
VAC14-207ENST00000566416 NAGPAQ9UK23 515 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms