RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 LEFTY2O00292 366 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 HRO43593 1189 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 AP1G2O75843 785 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 AKAP3O75969 853 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 ALDH1A2O94788 518 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 RHOBTB1O94844 696 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 ADH1CP00326 375 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 ASS1P00966 412 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 FAM200BP0CF97 657 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 CCDC192P0DO97 292 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 EPB41P11171 864 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 MBL2P11226 248 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 ARSAP15289 507 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 ATP5C1P36542 298 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 EIF2DP41214 584 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 FNTBP49356 437 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 PSEN1P49768 467 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 TUBP50607 506 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 NDST1P52848 882 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 MRPS21P82921 87 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 FKBP3Q00688 224 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 GAD2Q05329 585 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 DPYDQ12882 1025 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 IFRD2Q12894 506 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 STIM1Q13586 685 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 BYSLQ13895 437 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 E2F5Q15329 346 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 ZNF77Q15935 545 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 EML3Q32P44 896 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 HSF5Q4G112 596 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 USP39Q53GS9 565 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 SNX30Q5VWJ9 437 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 KRT39Q6A163 491 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 HEATR6Q6AI08 1181 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 SYT13Q7L8C5 426 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 CACNA2D4Q7Z3S7 1137 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 ACOT1Q86TX2 421 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 DCLK2Q8N568 766 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 KCNV2Q8TDN2 545 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 DDX1Q92499 740 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 CYFIP2Q96F07 1278 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 CDK5RAP1Q96SZ6 601 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 KCNK16Q96T55 309 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 PNKPQ96T60 521 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 ZNF518BQ9C0D4 1074 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 LINC00597Q9H2U6 94 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 TMEM8AQ9HCN3 771 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 CSNK1G1Q9HCP0 422 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 PNPLA8Q9NP80 782 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 HPS4Q9NQG7 708 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 IL37Q9NZH6 218 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 LSM7Q9UK45 103 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 CDV3Q9UKY7 258 aaKnown RBP6.91□□□□□ -1.3
FOXN3-205ENST00000553904 SH3BP1Q9Y3L3 701 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 WNT6Q9Y6F9 365 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 NCANO14594 1321 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 DOCK8Q8NF50 2099 aa6.91□□□□□ -1.3
FOXN3-205ENST00000553904 OTOL1A6NHN0 477 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-205ENST00000553904 K7ESF4 209 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 CLDN5O00501 218 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 AXIN1O15169 862 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 HCRTO43612 131 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 RNF40O75150 1001 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 TADA3O75528 432 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 RPP40O75818 363 aaKnown RBP6.9□□□□□ -1.3
FOXN3-205ENST00000553904 VNN1O95497 513 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 APBB3O95704 486 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 OLFM2O95897 454 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 OAS1P00973 400 aaKnown RBP6.9□□□□□ -1.3
FOXN3-205ENST00000553904 EGFP01133 1207 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 HLA-DRAP01903 254 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 APODP05090 189 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 RALAP11233 206 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 TDGF1P13385 188 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 TNFRSF4P43489 277 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 PLA2G4AP47712 749 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 GCLMP48507 274 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 SLC5A3P53794 718 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 MAP3K7CLP57077 242 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 USP46P62068 366 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 YWHAEP62258 255 aaKnown RBP6.9□□□□□ -1.3
FOXN3-205ENST00000553904 DLG4P78352 724 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 CETN1Q12798 172 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 USP4Q13107 963 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 GAS6Q14393 721 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 ELF2Q15723 593 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 CSRP2Q16527 193 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 ZNF658Q5TYW1 1059 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-205ENST00000553904 SCARA3Q6AZY7 606 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 SDE2Q6IQ49 451 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 FSTL4Q6MZW2 842 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 Q6ZS52 159 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 TRMT11Q7Z4G4 463 aaKnown RBP6.9□□□□□ -1.3
FOXN3-205ENST00000553904 FILIP1Q7Z7B0 1213 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 FAM35AQ86V20 835 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 ELOA2Q8IYF1 753 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-205ENST00000553904 ARHGAP18Q8N392 663 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 FBXL13Q8NEE6 735 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 GAB3Q8WWW8 586 aa6.9□□□□□ -1.3
FOXN3-205ENST00000553904 SMARCE1Q969G3 411 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 1125.2 ms