RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 MAN1B1Q9UKM7 699 aa13.96□□□□□ -0.18
HNRNPC-205ENST00000553300 BICDL2A1A5D9 508 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 C2orf78A6NCI8 922 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 GFRA3O60609 400 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 GADD45BO75293 160 aaPredicted RBP13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 AP1G2O75843 785 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 CHRNB1P11230 501 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 CACNA2D1P54289 1103 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 TNK2Q07912 1038 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 MTF1Q14872 753 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 ZNF77Q15935 545 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 TCERG1LQ5VWI1 586 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 SNX30Q5VWJ9 437 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 FRMD5Q7Z6J6 570 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 ARL14EPQ8N8R7 260 aaPredicted RBP13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 SLC2A14Q8TDB8 520 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 OSCP1Q8WVF1 389 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 ELMO3Q96BJ8 720 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 CYFIP2Q96F07 1278 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 SLC22A12Q96S37 553 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 KCNK16Q96T55 309 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 HNRNPABQ99729 332 aaKnown RBP13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 FAM126AQ9BYI3 521 aaPredicted RBP13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 FBXO44Q9H4M3 255 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 APOBEC3GQ9HC16 384 aaKnown RBP13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 CSNK1G1Q9HCP0 422 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 KRT82Q9NSB4 513 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 TMEM30AQ9NV96 361 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 COQ4Q9Y3A0 265 aa13.95□□□□□ -0.18
HNRNPC-205ENST00000553300 MYH10P35580 1976 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 KIF26AQ9ULI4 1882 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 COL4A3Q01955 1670 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 FAM186AA6NE01 2351 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 FAM92AA1XBS5 289 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 CILPO75339 1184 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 ANP32AP39687 249 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 PMS1P54277 932 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 SLC7A9P82251 487 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 USP4Q13107 963 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 NR1H3Q13133 447 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 MORC3Q14149 939 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 DCAF17Q5H9S7 520 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 DDX42Q86XP3 938 aaKnown RBP eCLIP13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 MAML2Q8IZL2 1156 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 CPA6Q8N4T0 437 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 TRIML1Q8N9V2 468 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 ATP2A3Q93084 1043 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 EBF3Q9H4W6 596 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 PNPLA8Q9NP80 782 aa13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 DUS2Q9NX74 493 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-205ENST00000553300 PATJQ8NI35 1801 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 TRIM49BA6NDI0 452 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 SLC9A3R1O14745 358 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 PMM2O15305 246 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 OLFM2O95897 454 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 ABL1P00519 1130 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 FAM200BP0CF97 657 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 CCDC130P13994 396 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 SOX9P48436 509 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 IFNAR2P48551 515 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 TUBP50607 506 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 CCR3P51677 355 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 SLC5A3P53794 718 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 NRLP54845 237 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 YWHAEP62258 255 aaKnown RBP13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 CETN1Q12798 172 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 MTAPQ13126 283 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 ISM2Q6H9L7 571 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 SPEM1Q8N4L4 309 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 C12orf29Q8N999 325 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 TTC8Q8TAM2 541 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 SH3RF2Q8TEC5 729 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 SEMA4DQ92854 862 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 FBXO32Q969P5 355 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 SLC35C1Q96A29 364 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 SMOQ99835 787 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 HPS4Q9NQG7 708 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.93□□□□□ -0.182e-7■■■■■ 31.7
HNRNPC-205ENST00000553300 PRMT8Q9NR22 394 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 HMGXB4Q9UGU5 601 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 PCDHGA2Q9Y5H1 932 aa13.93□□□□□ -0.18
HNRNPC-205ENST00000553300 FANCMQ8IYD8 2048 aa13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 PRR23AA6NEV1 266 aa13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 PPP1R3GB7ZBB8 358 aa13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 TRDMT1O14717 391 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 FGFR1OPO95684 399 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 GNA14O95837 355 aa13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 ZDHHC11BP0C7U3 371 aa13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 CD58P19256 250 aa13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 MAP3K7CLP57077 242 aa13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 CSTF1Q05048 431 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 GRSF1Q12849 480 aaKnown RBP eCLIP13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 IFRD2Q12894 506 aaPredicted RBP13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 ORC1Q13415 861 aa13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 CCINQ13939 588 aa13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 PON2Q15165 354 aa13.92□□□□□ -0.18
HNRNPC-205ENST00000553300 HECTD3Q5T447 861 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms