RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ARID5BQ14865 1188 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 DENND1BQ6P3S1 775 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 CPLX3Q8WVH0 158 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 FBXO44Q9H4M3 255 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 POMKQ9H5K3 350 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 CYLDQ9NQC7 956 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 MAGED2Q9UNF1 606 aaPredicted RBP20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 USP3Q9Y6I4 520 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 DENND4AQ7Z401 1863 aa20.45■□□□□ 0.86
PCOLCE-208ENST00000487172 TULP2O00295 520 aa20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 F11P03951 625 aa20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 YWHAQP27348 245 aa20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 SSTR3P32745 418 aaPredicted RBP20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 PPP3CCP48454 512 aa20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 NTHL1P78549 312 aa20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 MRPS5P82675 430 aaKnown RBP20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 ASIC2Q16515 512 aa20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 TMC6Q7Z403 805 aa20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 WDTC1Q8N5D0 677 aa20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 STKLD1Q8NE28 680 aa20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 OVCA2Q8WZ82 227 aa20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 ZNF638Q14966 1978 aaKnown RBP20.44■□□□□ 0.86
PCOLCE-208ENST00000487172 SOBPA7XYQ1 873 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 MOSPD3O75425 235 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 MMEP08473 750 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 TPM1P09493 284 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 MYL4P12829 197 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 CHRNB2P17787 502 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 FSHRP23945 695 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 GABRR2P28476 465 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 CDC25CP30307 473 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 HNRNPH3P31942 346 aaKnown RBP20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 CCR2P41597 374 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 FMO1Q01740 532 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 ARID5AQ03989 594 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 PMF1Q6P1K2 205 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 GAREM2Q75VX8 874 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 GPRIN1Q7Z2K8 1008 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 SCML4Q8N228 414 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 SCAMP5Q8TAC9 235 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 SLITRK1Q96PX8 696 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 SLC4A5Q9BY07 1137 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 PDCL3Q9H2J4 239 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 LRRC4Q9HBW1 653 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 USTQ9Y2C2 406 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 MRPS23Q9Y3D9 190 aaKnown RBP20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 CEP83Q9Y592 693 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 NCANO14594 1321 aa20.43■□□□□ 0.86
PCOLCE-208ENST00000487172 GOLGA6L3A6NEY3 463 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 ADCY5O95622 1261 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 LSM8O95777 96 aaKnown RBP20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 CYP1A1P04798 512 aaPredicted RBP20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 CDC25BP30305 580 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 ACADSBP45954 432 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 TAF10Q12962 218 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 SLC5A9Q2M3M2 681 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 TAF3Q5VWG9 929 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 E4F1Q66K89 784 aaPredicted RBP20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 TRIM72Q6ZMU5 477 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 TMEM150AQ86TG1 271 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 DRC7Q8IY82 874 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 TMEM35BQ8NCS4 154 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 PDZD8Q8NEN9 1154 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 OR8K1Q8NGG5 319 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 SLC20A1Q8WUM9 679 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 AGPAT1Q99943 283 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 SYT11Q9BT88 431 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 PHF7Q9BWX1 381 aaPredicted RBP20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 ZMYM5Q9UJ78 669 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 SCML2Q9UQR0 700 aa20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 BZW2Q9Y6E2 419 aaKnown RBP20.42■□□□□ 0.86
PCOLCE-208ENST00000487172 DENND4CQ5VZ89 1909 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 REV3LO60673 3130 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 IL9P15248 144 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 TKTL1P51854 596 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 SNX30Q5VWJ9 437 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 PM20D1Q6GTS8 502 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 CCDC186Q7Z3E2 898 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 TMEM110Q86TL2 294 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 CNGA4Q8IV77 575 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 ITFG1Q8TB96 612 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 SHKBP1Q8TBC3 707 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 TCEAL4Q96EI5 215 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 NOX5Q96PH1 765 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 ASB2Q96Q27 587 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 GCNAQ96QF7 691 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 DNAJC7Q99615 494 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 ATXN3LQ9H3M9 355 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 HAUS4Q9H6D7 363 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 GRPEL1Q9HAV7 217 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 CNGB3Q9NQW8 809 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 CYTH4Q9UIA0 394 aa20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 ZFP37Q9Y6Q3 630 aaPredicted RBP20.41■□□□□ 0.86
PCOLCE-208ENST00000487172 A0A1W2PRU2 124 aa20.4■□□□□ 0.86
PCOLCE-208ENST00000487172 MFAP3LO75121 409 aa20.4■□□□□ 0.86
PCOLCE-208ENST00000487172 TADA3O75528 432 aa20.4■□□□□ 0.86
PCOLCE-208ENST00000487172 GABBR2O75899 941 aa20.4■□□□□ 0.86
PCOLCE-208ENST00000487172 ZDHHC11BP0C7U3 371 aa20.4■□□□□ 0.86
PCOLCE-208ENST00000487172 DDX6P26196 483 aaKnown RBP eCLIP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms