RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 PFKLP17858 780 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 RPL13P26373 211 aaKnown RBP9.58□□□□□ -0.88
USF1-204ENST00000472217 GJA4P35212 333 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 PSMC2P35998 433 aaKnown RBP9.58□□□□□ -0.88
USF1-204ENST00000472217 PPP3CCP48454 512 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 IFNAR2P48551 515 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 NDST1P52848 882 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 NRLP54845 237 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 NUCB2P80303 420 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 DMWDQ09019 674 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 GRSF1Q12849 480 aaKnown RBP eCLIP9.58□□□□□ -0.88
USF1-204ENST00000472217 ADAM9Q13443 819 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 EML3Q32P44 896 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 EDRF1Q3B7T1 1238 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 PKN3Q6P5Z2 889 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 KIAA2013Q8IYS2 634 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 NUP93Q8N1F7 819 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 CRYBG2Q8N1P7 616 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 DCLK2Q8N568 766 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 ENGASEQ8NFI3 743 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 EEF2KMTQ96G04 330 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 SMARCD1Q96GM5 515 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 CCDC34Q96HJ3 373 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 SLITRK1Q96PX8 696 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 IMPG2Q9BZV3 1241 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 RNF38Q9H0F5 515 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 MMRN2Q9H8L6 949 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 ECT2Q9H8V3 914 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 FBRSL1Q9HCM7 1045 aaKnown RBP9.58□□□□□ -0.88
USF1-204ENST00000472217 DMAP1Q9NPF5 467 aaPredicted RBP9.58□□□□□ -0.88
USF1-204ENST00000472217 FAM49BQ9NUQ9 324 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 SMPD4Q9NXE4 827 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 F5P12259 2224 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 KIAA1549LQ6ZVL6 1849 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 CHURC1-FNTBB4DL54 471 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 LEFTY2O00292 366 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 TNFRSF10BO14763 440 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 AP1G2O75843 785 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 BEST1O76090 585 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 RTN3O95197 1032 aaPredicted RBP9.57□□□□□ -0.88
USF1-204ENST00000472217 EGFP01133 1207 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 YWHAQP27348 245 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 HOXC13P31276 330 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 PRCPP42785 496 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 FNTBP49356 437 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 GALK1P51570 392 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 SLC5A3P53794 718 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 SLC7A9P82251 487 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 AMPD2Q01433 879 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 ENPEPQ07075 957 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 INCA1Q0VD86 236 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 UNC93AQ86WB7 457 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 C12orf29Q8N999 325 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 PDZD8Q8NEN9 1154 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 ZMIZ2Q8NF64 920 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 SCAMP5Q8TAC9 235 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 SLC2A14Q8TDB8 520 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 OVCA2Q8WZ82 227 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 ERCC4Q92889 916 aaPredicted RBP9.57□□□□□ -0.88
USF1-204ENST00000472217 FBXO32Q969P5 355 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 GSDMAQ96QA5 445 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 TWNKQ96RR1 684 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 SMOQ99835 787 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 P2RY13Q9BPV8 354 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 NIF3L1Q9GZT8 377 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 LINC00597Q9H2U6 94 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 APOBEC3GQ9HC16 384 aaKnown RBP9.57□□□□□ -0.88
USF1-204ENST00000472217 TMEM8AQ9HCN3 771 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 RMND1Q9NWS8 449 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 IL37Q9NZH6 218 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 NCDNQ9UBB6 729 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 CPQQ9Y646 472 aa9.57□□□□□ -0.88
USF1-204ENST00000472217 MYO16Q9Y6X6 1858 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 FAM92AA1XBS5 289 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 SCAMP3O14828 347 aaKnown RBP9.56□□□□□ -0.88
USF1-204ENST00000472217 COCHO43405 550 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 RNF40O75150 1001 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 NFATC1O95644 943 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 CYP17A1P05093 508 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 MBL2P11226 248 aaPredicted RBP9.56□□□□□ -0.88
USF1-204ENST00000472217 ADORA2BP29275 332 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 GTF2H1P32780 548 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 MAP3K7CLP57077 242 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 MCCD1P59942 119 aaPredicted RBP9.56□□□□□ -0.88
USF1-204ENST00000472217 NR1H3Q13133 447 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 SRSF5Q13243 272 aaKnown RBP9.56□□□□□ -0.88
USF1-204ENST00000472217 COBLL1Q53SF7 1204 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 ZNF658Q5TYW1 1059 aaPredicted RBP9.56□□□□□ -0.88
USF1-204ENST00000472217 KRT39Q6A163 491 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 HEATR6Q6AI08 1181 aaKnown RBP9.56□□□□□ -0.88
USF1-204ENST00000472217 FILIP1Q7Z7B0 1213 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 LONP2Q86WA8 852 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 SPATA20Q8TB22 786 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 WHAMMQ8TF30 809 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 EZH1Q92800 747 aaPredicted RBP9.56□□□□□ -0.88
USF1-204ENST00000472217 CD101Q93033 1021 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 ZFRQ96KR1 1074 aaKnown RBP9.56□□□□□ -0.88
USF1-204ENST00000472217 CSNK1G1Q9HCP0 422 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 GMIPQ9P107 970 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 CFAP97Q9P2B7 532 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms