RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 FGF13Q92913 245 aa8.88□□□□□ -0.99
BRCC3-205ENST00000399026 PSMG2Q969U7 264 aa8.88□□□□□ -0.99
BRCC3-205ENST00000399026 ACSF2Q96CM8 615 aaPredicted RBP8.88□□□□□ -0.99
BRCC3-205ENST00000399026 FUBP3Q96I24 572 aaKnown RBP eCLIP8.88□□□□□ -0.99
BRCC3-205ENST00000399026 TNIP3Q96KP6 325 aa8.88□□□□□ -0.99
BRCC3-205ENST00000399026 ZNF512Q96ME7 567 aaPredicted RBP8.88□□□□□ -0.99
BRCC3-205ENST00000399026 FUCA2Q9BTY2 467 aa8.88□□□□□ -0.99
BRCC3-205ENST00000399026 NT5C1AQ9BXI3 368 aa8.88□□□□□ -0.99
BRCC3-205ENST00000399026 CYP3A43Q9HB55 503 aa8.88□□□□□ -0.99
BRCC3-205ENST00000399026 ABCB6Q9NP58 842 aa8.88□□□□□ -0.99
BRCC3-205ENST00000399026 FANCLQ9NW38 375 aa8.88□□□□□ -0.99
BRCC3-205ENST00000399026 HSFX1Q9UBD0 423 aa8.88□□□□□ -0.99
BRCC3-205ENST00000399026 AJAP1Q9UKB5 411 aaPredicted RBP8.88□□□□□ -0.99
BRCC3-205ENST00000399026 ZNF638Q14966 1978 aaKnown RBP8.88□□□□□ -0.99
BRCC3-205ENST00000399026 COL4A3Q01955 1670 aa8.88□□□□□ -0.99
BRCC3-205ENST00000399026 ATP8B3O60423 1300 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 SLC38A8A6NNN8 435 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 DLL1O00548 723 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 P4HA2O15460 535 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 CAPN5O15484 640 aaPredicted RBP8.87□□□□□ -0.99
BRCC3-205ENST00000399026 MOSPD3O75425 235 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 TADA3O75528 432 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 ANXA13P27216 316 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 GABRR2P28476 465 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 MAGEA11P43364 429 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 EPHA5P54756 1037 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 NCAPHQ15003 741 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 NFKBIBQ15653 356 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 TAF12Q16514 161 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 ZSCAN23Q3MJ62 389 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 VWA3BQ502W6 1294 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 CT47A1Q5JQC4 288 aaPredicted RBP8.87□□□□□ -0.99
BRCC3-205ENST00000399026 CYP4A22Q5TCH4 519 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 TRIM65Q6PJ69 517 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 PAQR9Q6ZVX9 377 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 DNAJB7Q7Z6W7 309 aaPredicted RBP8.87□□□□□ -0.99
BRCC3-205ENST00000399026 ITIH5Q86UX2 942 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 UNC93AQ86WB7 457 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 DHX40Q8IX18 779 aaKnown RBP8.87□□□□□ -0.99
BRCC3-205ENST00000399026 FUKQ8N0W3 1084 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 SLC4A11Q8NBS3 891 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 RSAD2Q8WXG1 361 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 MCRS1Q96EZ8 462 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 SMARCD1Q96GM5 515 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 KREMEN1Q96MU8 473 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 KXD1Q9BQD3 176 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 TUBGCP2Q9BSJ2 902 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 LRRC3Q9BY71 257 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 KDM4CQ9H3R0 1056 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 SLITRK6Q9H5Y7 841 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 CDH7Q9ULB5 785 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 USTQ9Y2C2 406 aa8.87□□□□□ -0.99
BRCC3-205ENST00000399026 NCANO14594 1321 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 COL4A2P08572 1712 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 ANAPC1Q9H1A4 1944 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 KIF26AQ9ULI4 1882 aaPredicted RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 PMM2O15305 246 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 AP1G2O75843 785 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 BEST1O76090 585 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 NOL4O94818 638 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 FAM163BP0C2L3 166 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 ATP1A3P13637 1013 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 HMGA1P17096 107 aaKnown RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 SLC9A1P19634 815 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 ACO1P21399 889 aaKnown RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 TBXAS1P24557 533 aaPredicted RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 EEF1GP26641 437 aaKnown RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 RAD23BP54727 409 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 YWHAEP62258 255 aaKnown RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 RPL10AP62906 217 aaKnown RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 HTR4Q13639 388 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 EXOC3L4Q17RC7 722 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 GOLGA7BQ2TAP0 167 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 PPP1R26Q5T8A7 1209 aaPredicted RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 PHLDB3Q6NSJ2 640 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 TMEM270Q6UE05 265 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 VSTM1Q6UX27 236 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 GBP6Q6ZN66 633 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 GAREM2Q75VX8 874 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 GPRIN1Q7Z2K8 1008 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 ZDHHC14Q8IZN3 488 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 RBBP8NLQ8NC74 664 aaPredicted RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 FAM174AQ8TBP5 190 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 FGF14Q92915 247 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 ZSWIM3Q96MP5 696 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 GCNAQ96QF7 691 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 KCNK16Q96T55 309 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 SMOQ99835 787 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 LSM14BQ9BX40 385 aaKnown RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 VPS16Q9H269 839 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 HSD3B7Q9H2F3 369 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 ATXN3LQ9H3M9 355 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 NDST4Q9H3R1 872 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 SIX2Q9NPC8 291 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 DMAP1Q9NPF5 467 aaPredicted RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 AVENQ9NQS1 362 aaPredicted RBP8.86□□□□□ -0.99
BRCC3-205ENST00000399026 EPS15L1Q9UBC2 864 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 ASB3Q9Y575 518 aa8.86□□□□□ -0.99
BRCC3-205ENST00000399026 PCDHB4Q9Y5E5 795 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms