RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SPOCD1Q6ZMY3 1216 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 CFAP61Q8NHU2 1237 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 GIPC2Q8TF65 315 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 ARHGAP28Q9P2N2 729 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 AOC2O75106 756 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 AMHP03971 560 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 FNTAP49354 379 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 PDK2Q15119 407 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 ZBTB41Q5SVQ8 909 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 PPHLN1Q8NEY8 458 aaKnown RBP13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 EXD1Q8NHP7 514 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 ULBP1Q9BZM6 244 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 L2HGDHQ9H9P8 463 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 WRAP73Q9P2S5 460 aaPredicted RBP13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 ZNF112Q9UJU3 913 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 C2CD2Q9Y426 696 aa13.64□□□□□ -0.23
PTPRN2-202ENST00000389416 A0A0U1RQJ8 604 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 SEPT4O43236 478 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 KLRC2P26717 231 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 CTCFP49711 727 aaPredicted RBP13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 CRLF3Q8IUI8 442 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 BAP1Q92560 729 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 VCPIP1Q96JH7 1222 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 RASSF4Q9H2L5 321 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 NT5C1B-RDH14C9J2C7 533 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 MTSS1O43312 755 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 USP17L7P0C7H9 530 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 AVPR1AP37288 418 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 PRKCIP41743 596 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 FASTKD1Q53R41 847 aaKnown RBP13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 NOMO2Q5JPE7 1267 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 TTC30BQ8N4P2 665 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 ZFP42Q96MM3 310 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 TLR10Q9BXR5 811 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 AFF4Q9UHB7 1163 aaKnown RBP13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 CRYBG1Q9Y4K1 1723 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 F8VP50 259 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 M0R2N6 131 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 PRLRP16471 622 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 FAM133BQ5BKY9 247 aaKnown RBP13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 FAM71AQ8IYT1 594 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 ISCUQ9H1K1 167 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 LOC102724159A0A0B4J2E5 919 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 SNX2O60749 519 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 CDH16O75309 829 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 KITP10721 976 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 GRM5P41594 1212 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 CASP2P42575 452 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 PWP2Q15269 919 aaKnown RBP13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 WDR75Q8IWA0 830 aaKnown RBP13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 C12orf29Q8N999 325 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 C18orf25Q96B23 403 aaPredicted RBP13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 KLF6Q99612 283 aaPredicted RBP13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 APOL2Q9BQE5 337 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 ELOVL4Q9GZR5 314 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 IPPQ9Y573 584 aa13.63□□□□□ -0.23
PTPRN2-202ENST00000389416 C5P01031 1676 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 ASS1P00966 412 aaKnown RBP13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 JCHAINP01591 159 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 PCBP1Q15365 356 aaKnown RBP eCLIP13.62□□□□□ -0.235e-7■■■■■ 32.6
PTPRN2-202ENST00000389416 TRMT10CQ7L0Y3 403 aaKnown RBP13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 DDI1Q8WTU0 396 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 SEMA4DQ92854 862 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 ZNF669Q96BR6 464 aaPredicted RBP13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 MBOAT7Q96N66 472 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 C4BP0C0L5 1744 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 RNF225M0QZC1 329 aaPredicted RBP13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 ARIH2O95376 493 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 PYGMP11217 842 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 WEE1P30291 646 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 ARL2P36404 184 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 SP2Q02086 613 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 MCL1Q07820 350 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 SLC29A2Q14542 456 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 CNGA2Q16280 664 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 COBLL1Q53SF7 1204 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 PALB2Q86YC2 1186 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 C4orf33Q8N1A6 199 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 CELF6Q96J87 481 aaKnown RBP13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 MFSD14AQ96MC6 490 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 GTSE1Q9NYZ3 720 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 HACD3Q9P035 362 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 DCTN4Q9UJW0 460 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 PADI3Q9ULW8 664 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 YWHAQP27348 245 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 C11orf63Q6NUN7 778 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 DENND5BQ6ZUT9 1274 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 PPIL6Q8IXY8 311 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 TMEM86AQ8N2M4 240 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 MSL3Q8N5Y2 521 aaKnown RBP13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 PTPRN2Q92932 1015 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 PNKPQ96T60 521 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 EGFL8Q99944 293 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 HIPK3Q9H422 1215 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 TRABDQ9H4I3 376 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 FBXO44Q9H4M3 255 aa13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 TLR8Q9NR97 1041 aaKnown RBP13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 SLC30A1Q9Y6M5 507 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms